-
Notifications
You must be signed in to change notification settings - Fork 3
/
setup.py
51 lines (44 loc) · 1.44 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
from setuptools import setup
def readme():
with open('README.md') as f:
return f.read()
pypi_classifiers = [
'Programming Language :: Python :: 3',
"Development Status :: 4 - Beta",
"Environment :: Console",
"Operating System :: OS Independent",
'Intended Audience :: Science/Research',
'Natural Language :: English',
'Topic :: Scientific/Engineering :: Bio-Informatics',
"Topic :: Software Development :: Libraries :: Python Modules",
'License :: OSI Approved :: MIT License',
]
install_requires = [
"pandas>=0.20.3",
'biopython>=1.70',
"pymummer>=0.10.3",
]
desc = """Map TIR-pHMM models to genomic sequences for annotation of MITES and complete DNA-Transposons."""
setup(name='tirmite',
version='1.1.4',
description=desc,
long_description=readme(),
long_description_content_type="text/markdown",
url='https://github.com/Adamtaranto/TIRmite',
author='Adam Taranto',
author_email='[email protected]',
license='MIT',
packages=['tirmite'],
classifiers=pypi_classifiers,
keywords=["Transposon", "TIR", "MITE", "TE", "HMM"],
install_requires=install_requires,
include_package_data=True,
zip_safe=False,
entry_points={
'console_scripts': [
'tirmite=tirmite.cmd_tirmite:main',
'tsplit-LTR=tirmite.cmd_LTR:main',
'tsplit-TIR=tirmite.cmd_TIR:main',
],
},
)