diff --git a/workflow/rules/post_findcircrna_processing.smk b/workflow/rules/post_findcircrna_processing.smk index 8368811..192cc23 100644 --- a/workflow/rules/post_findcircrna_processing.smk +++ b/workflow/rules/post_findcircrna_processing.smk @@ -316,7 +316,7 @@ if RUN_MAPSPLICE: peorse=get_peorse, run_mapsplice=N_RUN_MAPSPLICE, bash2nreads_pyscript=join(SCRIPTS_DIR, "_bam_get_alignment_stats.py"), - tmpdir=f"{TEMPDIR}/{str(uuid.uuid4())}", + tmpdir=f"{TEMPDIR}/{str(uuid.uuid4())}", threads: getthreads("alignment_stats") container: config['containers']["base"] shell: @@ -366,7 +366,7 @@ else: peorse=get_peorse, run_mapsplice=N_RUN_MAPSPLICE, bash2nreads_pyscript=join(SCRIPTS_DIR, "_bam_get_alignment_stats.py"), - tmpdir=f"{TEMPDIR}/{str(uuid.uuid4())}", + tmpdir=f"{TEMPDIR}/{str(uuid.uuid4())}", threads: getthreads("alignment_stats") container: config['containers']["base"] shell: