Normalize leChRO-seq bw files to rad run-on normalization values

!/usr/bin/bash
CI=/local/storage/projects/prophaseI/data/scaled_files/mm10.chromInfo.sizes


function normBw {
        bigWigToBedGraph ${1}.bw tmp.bedGraph
        cat tmp.bedGraph | awk 'BEGIN{OFS="\t"} {print $1,$2,$3,$4*'$NORMVALUERAD'/1}' > tmp.S2.bedGraph
        bedGraphToBigWig tmp.S2.bedGraph $CI $1.S2.bw
        rm tmp.bedGraph tmp.S2.bedGraph
}




        echo $READCOUNTS
		normBw LZ_merged_all_minus.bw $NORMVALUERAD
       	normBw LZ_merged_all_plus.bw $NORMVALUERAD
        normBw LZ_R1_minus.bw $NORMVALUERAD
        normBw LZ_R1_plus.bw $NORMVALUERAD
        normBw LZ_R2_minus.bw $NORMVALUERAD
        normBw LZ_R2_plus.bw $NORMVALUERAD
        normBw LZ_R3_minus.bw $NORMVALUERAD
        normBw LZ_R3_plus.bw $NORMVALUERAD
        normBw LZ_R4_minus.bw $NORMVALUERAD
        normBw LZ_R4_plus.bw $NORMVALUERAD
        
        normBw P_merged_all_minus.bw $NORMVALUERAD
        normBw P_merged_all_plus.bw $NORMVALUERAD
        normBw P_R1_minus.bw $NORMVALUERAD
        normBw P_R1_plus.bw $NORMVALUERAD
        normBw P_R2_minus.bw $NORMVALUERAD
        normBw P_R2_plus.bw $NORMVALUERAD
        normBw P_R3_minus.bw $NORMVALUERAD
        normBw P_R3_plus.bw $NORMVALUERAD
        normBw P_R4_minus.bw $NORMVALUERAD
        normBw P_R4_plus.bw $NORMVALUERAD
        
    	normBw D_merged_all_minus.bw $NORMVALUERAD
		normBw D_merged_all_plus.bw $NORMVALUERAD
		normBw D_R1_minus.bw $NORMVALUERAD         
		normBw D_R1_plus.bw $NORMVALUERAD           
		normBw D_R2_minus.bw $NORMVALUERAD          
		normBw D_R2_plus.bw $NORMVALUERAD           
		normBw D_R3_minus.bw $NORMVALUERAD          
		normBw D_R3_plus.bw $NORMVALUERAD           
		normBw D_R4_minus.bw $NORMVALUERAD          
		normBw D_R4_plus.bw $NORMVALUERAD
        
        
        
done

/local/storage/projects/prophaseI/data/scaled_files/proseq/normBW/radrunon