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python >=3.8 + license: BSD-3-Clause + license_family: BSD + purls: + - pkg:pypi/zict?source=conda-forge-mapping + size: 36325 + timestamp: 1681770298596 - kind: conda name: zipp version: 3.19.2 diff --git a/pixi.toml b/pixi.toml index a75d8bb..cad47c8 100644 --- a/pixi.toml +++ b/pixi.toml @@ -38,6 +38,7 @@ app = "bokeh serve web_app --show --dev --port 5007" [feature.common.dependencies] bokeh = ">=3.0" +contextily = "*" fiona = "*" geocube = "*" geopandas = "*" @@ -67,18 +68,21 @@ shapely = ">=2" tomli = "*" tomli-w = "*" types-requests = "*" +xugrid = "*" [feature.common.pypi-dependencies] +bokeh_helpers = { path = "src/bokeh_helpers", editable = true } hydamo = { path = "src/hydamo", editable = true } +peilbeheerst_model = { path = "src/peilbeheerst_model", editable = true } +ribasim_lumping = { path = "src/ribasim_lumping", editable = true } ribasim_nl = { path = "src/ribasim_nl", editable = true } -bokeh_helpers = { path = "src/bokeh_helpers", editable = true } -# [feature.dev.pypi-dependencies] -# ribasim = { path = "../Ribasim/python/ribasim", editable = true } +[feature.dev.pypi-dependencies] +ribasim = { path = "../Ribasim/python/ribasim", editable = true } [feature.prod.dependencies] ribasim = "==2024.10.0" [environments] default = { features = ["common", "prod"] } -# dev = { features = ["common", "dev"] } +dev = { features = ["common", "dev"] } diff --git a/src/bokeh_helpers/README.md b/src/bokeh_helpers/README.md new file mode 100644 index 0000000..fb2b5f1 --- /dev/null +++ b/src/bokeh_helpers/README.md @@ -0,0 +1 @@ +Helpers for building Bokeh dashboards. diff --git a/src/bokeh_helpers/bokeh_helpers/__init__.py b/src/bokeh_helpers/bokeh_helpers/__init__.py index f102a9c..3dc1f76 100644 --- a/src/bokeh_helpers/bokeh_helpers/__init__.py +++ b/src/bokeh_helpers/bokeh_helpers/__init__.py @@ -1 +1 @@ -__version__ = "0.0.1" +__version__ = "0.1.0" diff --git a/src/bokeh_helpers/pyproject.toml b/src/bokeh_helpers/pyproject.toml index 8764c76..26ee051 100644 --- a/src/bokeh_helpers/pyproject.toml +++ b/src/bokeh_helpers/pyproject.toml @@ -1,9 +1,9 @@ [build-system] -requires = ["setuptools>=61"] -build-backend = "setuptools.build_meta" +requires = ["hatchling"] +build-backend = "hatchling.build" [project] -name = "bokeh-helpers" +name = "bokeh_helpers" description = "helpers for building bokeh dashboards" readme = "README.md" authors = [ @@ -20,11 +20,5 @@ dynamic = ["version"] [project.optional-dependencies] tests = ["pytest"] -[tool.setuptools] -zip-safe = true - -[tool.setuptools.dynamic] -version = { attr = "bokeh_helpers.__version__" } - -[tool.setuptools.packages.find] -include = ["bokeh_helpers"] +[tool.hatch.version] +path = "bokeh_helpers/__init__.py" diff --git a/src/hydamo/pyproject.toml b/src/hydamo/pyproject.toml index fa29f8d..de2b813 100644 --- a/src/hydamo/pyproject.toml +++ b/src/hydamo/pyproject.toml @@ -1,6 +1,6 @@ [build-system] -requires = ["setuptools>=61"] -build-backend = "setuptools.build_meta" +requires = ["hatchling"] +build-backend = "hatchling.build" [project] name = "hydamo" @@ -20,17 +20,8 @@ dynamic = ["version"] [project.optional-dependencies] tests = ["pytest"] -[tool.setuptools] -zip-safe = true - -[tool.setuptools.dynamic] -version = { attr = "hydamo.__version__" } - -[tool.setuptools.packages.find] -include = ["hydamo"] - -[tool.setuptools.package-data] -"hydamo" = ["**/*.csv", "**/*.qml", "**/*.sld", "**/*.json"] +[tool.hatch.version] +path = "hydamo/__init__.py" [project.urls] Documentation = "https://deltares.github.io/Ribasim-NL/HyDAMO" diff --git a/src/peilbeheerst_model/pyproject.toml b/src/peilbeheerst_model/pyproject.toml index 4089b0d..641b029 100644 --- a/src/peilbeheerst_model/pyproject.toml +++ b/src/peilbeheerst_model/pyproject.toml @@ -1,6 +1,6 @@ [build-system] -requires = ["setuptools>=61"] -build-backend = "setuptools.build_meta" +requires = ["hatchling"] +build-backend = "hatchling.build" [project] name = "peilbeheerst_model" @@ -8,34 +8,20 @@ description = "functions to derive a Ribasim network from a hydro-dataset" readme = "README.md" authors = [ { name = "Guy Dupuits", email = "dupuits@hkv.nl" }, - { name = "Jerom Aerts", email = "J.Aerts@hkv.nl" }, - { name = "Ron Bruijns", email = "R.Bruijns@hkv.nl" }, + { name = "Jerom Aerts", email = "J.Aerts@hkv.nl" }, + { name = "Ron Bruijns", email = "R.Bruijns@hkv.nl" }, ] license = { text = "MIT" } requires-python = ">=3.10" -dependencies = [ - "geopandas", - "numpy", - "pandas", - "pydantic", - "shapely", - "tqdm", -] +dependencies = ["geopandas", "numpy", "pandas", "pydantic", "shapely", "tqdm"] dynamic = ["version"] [project.optional-dependencies] tests = ["pytest"] -[tool.setuptools] -zip-safe = true - -[tool.setuptools.dynamic] -version = { attr = "peilbeheerst_model.__version__" } - -[tool.setuptools.packages.find] -include = ["peilbeheerst_model"] - +[tool.hatch.version] +path = "peilbeheerst_model/__init__.py" [project.urls] Documentation = "https://deltares.github.io/Ribasim-NL/Peilbeheerst-model" diff --git a/src/ribasim_lumping/.gitignore b/src/ribasim_lumping/.gitignore new file mode 100644 index 0000000..7e48ac8 --- /dev/null +++ b/src/ribasim_lumping/.gitignore @@ -0,0 +1,136 @@ +# Byte-compiled / optimized / DLL files +__pycache__/ +*.py[cod] +*$py.class + +# C extensions +*.so + +# Distribution / packaging +.Python +build/ +develop-eggs/ +dist/ +downloads/ +eggs/ +.eggs/ +lib/ +lib64/ +parts/ +sdist/ +var/ +wheels/ +pip-wheel-metadata/ +share/python-wheels/ +*.egg-info/ +.installed.cfg +*.egg +MANIFEST + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. +*.manifest +*.spec + +# Installer logs +pip-log.txt +pip-delete-this-directory.txt + +# Unit test / coverage reports +htmlcov/ +.tox/ +.nox/ +.coverage +.coverage.* +.cache +nosetests.xml +coverage.xml +*.cover +*.py,cover +.hypothesis/ +.pytest_cache/ + +# Translations +*.mo +*.pot + +# Django stuff: +*.log +local_settings.py +db.sqlite3 +db.sqlite3-journal + +# Flask stuff: +instance/ +.webassets-cache + +# Scrapy stuff: +.scrapy + +# Sphinx documentation +docs/_build/ + +# PyBuilder +target/ + +# Jupyter Notebook +.ipynb_checkpoints + +# IPython +profile_default/ +ipython_config.py + +# pyenv +.python-version + +# pipenv +# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. +# However, in case of collaboration, if having platform-specific dependencies or dependencies +# having no cross-platform support, pipenv may install dependencies that don't work, or not +# install all needed dependencies. +#Pipfile.lock + +# PEP 582; used by e.g. github.com/David-OConnor/pyflow +__pypackages__/ + +# Celery stuff +celerybeat-schedule +celerybeat.pid + +# SageMath parsed files +*.sage.py + +# Environments +.env +.venv +env/ +venv/ +ENV/ +env.bak/ +venv.bak/ + +# Spyder project settings +.spyderproject +.spyproject + +# Rope project settings +.ropeproject + +# mkdocs documentation +/site + +# mypy +.mypy_cache/ +.dmypy.json +dmypy.json + +# Pyre type checker +.pyre/ + +# PyCharm .idea-folder +.idea/* + +# Windows command-files +*.cmd +*.bat diff --git a/src/ribasim_lumping/README.md b/src/ribasim_lumping/README.md new file mode 100644 index 0000000..a5ee50c --- /dev/null +++ b/src/ribasim_lumping/README.md @@ -0,0 +1,29 @@ +# ribasim-lumping + +This python package is used to develop an aggregated Ribasim network (Deltares, https://github.com/Deltares/Ribasim). Documentation: https://deltares.github.io/Ribasim/ + +This code was integrated into the Ribasim-NL repository after development in https://github.com/harm-nomden-sweco/ribasim_lumping. + +### Objective +This python-package provides functions to translate a D-Hydro or a HyDAMO network into a simplified (aggregated/lumped) Ribasim-network: +- The user provides a list of locations where the network should be split, resulting into sub-networks which are called 'basins''; +- For these basins relations regarding waterlevel-watersurface-watervolume are calculated; +- Exchange of watervolume (flow) between basins takes place via these split locations. +- Stage-discharge relations are generated to define flow-rates between basins. + +### Dependencies +Most important dependencies: +- NETWORKX (https://networkx.org/, Hagberg et al., 2008) +- UGRID (https://github.com/Deltares/UGridPy) +- XUGRID (https://github.com/Deltares/xugrid) + +### Installation +We will make this package accessible via pypi. It is recommended to clone this repository because it is under development and it includes some example notebooks. We are still working on tests and test data, etc. + +### Development, contributions and licences +This package is developed by Sweco (contributors: Harm Nomden and Tessa Andringa) when working on a TKI-project (top consortia for knowledge and innovation) within the NHI programme (Dutch Hydrological Instruments programme). This focuses on the development, testing and application of the new Ribasim-model (https://tkideltatechnologie.nl/project/oppervlaktewatermodule-nhi/). +It is possible to contribute, create issues, start discussions. We will respond as soon as possible. +This package is developed under the MIT license. Reference to this package: Ribasim-Lumping (Sweco, 2023). + +### References: +Aric A. Hagberg, Daniel A. Schult and Pieter J. Swart, “Exploring network structure, dynamics, and function using NetworkX”, in Proceedings of the 7th Python in Science Conference (SciPy2008), Gäel Varoquaux, Travis Vaught, and Jarrod Millman (Eds), (Pasadena, CA USA), pp. 11–15, Aug 2008 diff --git a/src/ribasim_lumping/pyproject.toml b/src/ribasim_lumping/pyproject.toml new file mode 100644 index 0000000..41902ec --- /dev/null +++ b/src/ribasim_lumping/pyproject.toml @@ -0,0 +1,32 @@ +[build-system] +requires = ["hatchling"] +build-backend = "hatchling.build" + +[project] +name = "ribasim_lumping" +description = "Aggregate a HyDAMO or D-Hydro network into a simplified Ribasim network" +readme = "README.md" +authors = [ + { name = "Harm Nomden", email = "harm.nomden@sweco.nl" }, + { name = "Tessa Andringa", email = "tessa.andringa@sweco.nl" }, +] +license = { text = "MIT" } + +requires-python = ">=3.10" +dependencies = [ + "contextily", + "geopandas", + "matplotlib", + "networkx", + "numpy", + "pandas", + "pydantic", + "ribasim", + "shapely", + "xarray", + "xugrid", +] +dynamic = ["version"] + +[tool.hatch.version] +path = "ribasim_lumping/__init__.py" diff --git a/scripts/ribasim_lumping/__init__.py b/src/ribasim_lumping/ribasim_lumping/__init__.py similarity index 84% rename from scripts/ribasim_lumping/__init__.py rename to src/ribasim_lumping/ribasim_lumping/__init__.py index 48f2970..e56a829 100644 --- a/scripts/ribasim_lumping/__init__.py +++ b/src/ribasim_lumping/ribasim_lumping/__init__.py @@ -1,3 +1,5 @@ +__version__ = "0.1.0" + from ribasim_lumping.ribasim_lumping import create_ribasim_lumping_network __all__ = ["create_ribasim_lumping_network"] diff --git a/scripts/ribasim_lumping/assets/countlines.py b/src/ribasim_lumping/ribasim_lumping/assets/countlines.py similarity index 100% rename from scripts/ribasim_lumping/assets/countlines.py rename to src/ribasim_lumping/ribasim_lumping/assets/countlines.py diff --git a/scripts/ribasim_lumping/assets/ribasim_network.qgz b/src/ribasim_lumping/ribasim_lumping/assets/ribasim_network.qgz similarity index 100% rename from scripts/ribasim_lumping/assets/ribasim_network.qgz rename to src/ribasim_lumping/ribasim_lumping/assets/ribasim_network.qgz diff --git a/scripts/ribasim_lumping/dhydro/__init__.py b/src/ribasim_lumping/ribasim_lumping/dhydro/__init__.py similarity index 100% rename from scripts/ribasim_lumping/dhydro/__init__.py rename to src/ribasim_lumping/ribasim_lumping/dhydro/__init__.py diff --git a/scripts/ribasim_lumping/dhydro/read_dhydro_network.py b/src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_network.py similarity index 100% rename from scripts/ribasim_lumping/dhydro/read_dhydro_network.py rename to src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_network.py diff --git a/scripts/ribasim_lumping/dhydro/read_dhydro_simulations.py b/src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_simulations.py similarity index 100% rename from scripts/ribasim_lumping/dhydro/read_dhydro_simulations.py rename to src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_simulations.py diff --git a/scripts/ribasim_lumping/dhydro/read_dhydro_simulations_utils.py b/src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_simulations_utils.py similarity index 100% rename from scripts/ribasim_lumping/dhydro/read_dhydro_simulations_utils.py rename to src/ribasim_lumping/ribasim_lumping/dhydro/read_dhydro_simulations_utils.py diff --git a/scripts/ribasim_lumping/hydamo/__init__.py b/src/ribasim_lumping/ribasim_lumping/hydamo/__init__.py similarity index 100% rename from scripts/ribasim_lumping/hydamo/__init__.py rename to src/ribasim_lumping/ribasim_lumping/hydamo/__init__.py diff --git a/scripts/ribasim_lumping/hydamo/preprocess_hydamo_dataset.py b/src/ribasim_lumping/ribasim_lumping/hydamo/preprocess_hydamo_dataset.py similarity index 100% rename from scripts/ribasim_lumping/hydamo/preprocess_hydamo_dataset.py rename to src/ribasim_lumping/ribasim_lumping/hydamo/preprocess_hydamo_dataset.py diff --git a/scripts/ribasim_lumping/hydamo/read_hydamo_network.py b/src/ribasim_lumping/ribasim_lumping/hydamo/read_hydamo_network.py similarity index 100% rename from scripts/ribasim_lumping/hydamo/read_hydamo_network.py rename to src/ribasim_lumping/ribasim_lumping/hydamo/read_hydamo_network.py diff --git a/scripts/ribasim_lumping/ribasim_lumping.py b/src/ribasim_lumping/ribasim_lumping/ribasim_lumping.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_lumping.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_lumping.py diff --git a/scripts/ribasim_lumping/ribasim_model_generator/__init__.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/__init__.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_generator/__init__.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/__init__.py diff --git a/scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model.py diff --git a/scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_preprocessing.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_preprocessing.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_preprocessing.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_preprocessing.py diff --git a/scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_tables.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_tables.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_tables.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_generator/generate_ribasim_model_tables.py diff --git a/scripts/ribasim_lumping/ribasim_model_results/__init__.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_results/__init__.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_results/__init__.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_results/__init__.py diff --git a/scripts/ribasim_lumping/ribasim_model_results/ribasim_results.py b/src/ribasim_lumping/ribasim_lumping/ribasim_model_results/ribasim_results.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_model_results/ribasim_results.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_model_results/ribasim_results.py diff --git a/scripts/ribasim_lumping/ribasim_network_generator/__init__.py b/src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/__init__.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_network_generator/__init__.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/__init__.py diff --git a/scripts/ribasim_lumping/ribasim_network_generator/export_load_split_nodes.py b/src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/export_load_split_nodes.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_network_generator/export_load_split_nodes.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/export_load_split_nodes.py diff --git a/scripts/ribasim_lumping/ribasim_network_generator/generate_ribasim_network.py b/src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/generate_ribasim_network.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_network_generator/generate_ribasim_network.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/generate_ribasim_network.py diff --git a/scripts/ribasim_lumping/ribasim_network_generator/generate_split_nodes.py b/src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/generate_split_nodes.py similarity index 100% rename from scripts/ribasim_lumping/ribasim_network_generator/generate_split_nodes.py rename to src/ribasim_lumping/ribasim_lumping/ribasim_network_generator/generate_split_nodes.py diff --git a/scripts/ribasim_lumping/utils/general_functions.py b/src/ribasim_lumping/ribasim_lumping/utils/general_functions.py similarity index 100% rename from scripts/ribasim_lumping/utils/general_functions.py rename to src/ribasim_lumping/ribasim_lumping/utils/general_functions.py diff --git a/scripts/ribasim_lumping/utils/remove_holes_from_polygons.py b/src/ribasim_lumping/ribasim_lumping/utils/remove_holes_from_polygons.py similarity index 100% rename from scripts/ribasim_lumping/utils/remove_holes_from_polygons.py rename to src/ribasim_lumping/ribasim_lumping/utils/remove_holes_from_polygons.py diff --git a/src/ribasim_nl/pyproject.toml b/src/ribasim_nl/pyproject.toml index 75893b9..e87168b 100644 --- a/src/ribasim_nl/pyproject.toml +++ b/src/ribasim_nl/pyproject.toml @@ -1,6 +1,6 @@ [build-system] -requires = ["setuptools>=61"] -build-backend = "setuptools.build_meta" +requires = ["hatchling"] +build-backend = "hatchling.build" [project] name = "ribasim_nl" @@ -8,7 +8,7 @@ description = "functions to work with python classes you typically find in hydro readme = "README.md" authors = [ { name = "Daniel Tollenaar", email = "daniel@d2hydro.nl" }, - { name = "Martijn Visser", email = "martijn.visser@deltares.nl" } + { name = "Martijn Visser", email = "martijn.visser@deltares.nl" } ] license = { text = "MIT" } @@ -21,15 +21,8 @@ dynamic = ["version"] [project.optional-dependencies] tests = ["pytest"] -[tool.setuptools] -zip-safe = true - -[tool.setuptools.dynamic] -version = { attr = "ribasim_nl.__version__" } - -[tool.setuptools.packages.find] -include = ["ribasim_nl"] - +[tool.hatch.version] +path = "ribasim_nl/__init__.py" [project.urls] Documentation = "https://deltares.github.io/Ribasim-NL" diff --git a/src/ribasim_nl/ribasim_nl/__init__.py b/src/ribasim_nl/ribasim_nl/__init__.py index 74359d4..593c2b2 100644 --- a/src/ribasim_nl/ribasim_nl/__init__.py +++ b/src/ribasim_nl/ribasim_nl/__init__.py @@ -1,4 +1,4 @@ -__version__ = "0.0.1" +__version__ = "0.1.0" from ribasim_nl.cloud import CloudStorage from ribasim_nl.model import Model