diff --git a/dev/_examples/build_1d2dmodel.html b/dev/_examples/build_1d2dmodel.html
index 58e07c4..3e96277 100644
--- a/dev/_examples/build_1d2dmodel.html
+++ b/dev/_examples/build_1d2dmodel.html
@@ -680,230 +680,230 @@ <h2>Building a 1D2D Delft3D FM model<a class="headerlink" href="#Building-a-1D2D
 </div>
 <div class="output_area docutils container">
 <div class="highlight"><pre>
-2024-10-16 09:28:08,274 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/hydromt.log.
-2024-10-16 09:28:08,274 - build - log - INFO - HydroMT version: 0.10.0
-2024-10-16 09:28:08,274 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d.
-2024-10-16 09:28:08,274 - build - main - INFO - User settings:
+2024-10-16 09:44:42,204 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/hydromt.log.
+2024-10-16 09:44:42,204 - build - log - INFO - HydroMT version: 0.10.0
+2024-10-16 09:44:42,204 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d.
+2024-10-16 09:44:42,204 - build - main - INFO - User settings:
 Downloading file &#39;v0.0.9/data_catalog.yml&#39; from &#39;https://raw.githubusercontent.com/Deltares/hydromt/main/data/catalogs/artifact_data/v0.0.9/data_catalog.yml&#39; to &#39;/home/runner/.hydromt_data/artifact_data&#39;.
-2024-10-16 09:28:09,023 - build - data_catalog - INFO - Reading data catalog artifact_data latest
-2024-10-16 09:28:09,024 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
+2024-10-16 09:44:43,044 - build - data_catalog - INFO - Reading data catalog artifact_data latest
+2024-10-16 09:44:43,044 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
 Downloading data from &#39;https://github.com/DirkEilander/hydromt-artifacts/releases/download/v0.0.9/data.tar.gz&#39; to file &#39;/home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar.gz&#39;.
 SHA256 hash of downloaded file: 32de5b95c171628547f303d7f65d53cbb1b9da9af4834717c8efff93fe55aad4
 Use this value as the &#39;known_hash&#39; argument of &#39;pooch.retrieve&#39; to ensure that the file hasn&#39;t changed if it is downloaded again in the future.
 Untarring contents of &#39;/home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar.gz&#39; to &#39;/home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar&#39;
-2024-10-16 09:28:11,578 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
-2024-10-16 09:28:11,578 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
-2024-10-16 09:28:11,583 - build - dflowfm - INFO - Initialising empty mdu file
-2024-10-16 09:28:11,588 - build - dflowfm - INFO - project crs: 3857
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.hydrography_fn: merit_hydro
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.river_geom_fn: hydro_rivers_lin
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.rivers_defaults_fn: rivers_defaults
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.rivdph_method: gvf
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.rivwth_method: geom
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.river_upa: 25.0
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.river_len: 1000
-2024-10-16 09:28:11,588 - build - model_api - INFO - setup_rivers_from_dem.min_rivwth: 50.0
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.min_rivdph: 1.0
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.rivbank: True
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.rivbankq: 25
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.segment_length: 3000.0
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.smooth_length: 10000.0
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.friction_type: Manning
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.friction_value: 0.023
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.constrain_rivbed: True
-2024-10-16 09:28:11,589 - build - model_api - INFO - setup_rivers_from_dem.constrain_estuary: True
-2024-10-16 09:28:11,589 - build - dflowfm - INFO - Preparing river shape from hydrography data.
-2024-10-16 09:28:11,596 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:28:11,716 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:28:11,719 - build - geodataframe - INFO - Reading hydro_rivers_lin vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/rivers_lin2019_v1.gpkg
-2024-10-16 09:28:11,748 - build - geodataframe - DEBUG - Clip intersects [1384045.361, 5855358.290, 1393854.608, 5866810.259] (EPSG:3857)
-2024-10-16 09:28:19,298 - build - dem - INFO - Deriving bankfull river surface elevation from its banks.
-2024-10-16 09:28:25,983 - build - dem - INFO - Smoothing river width (n=2).
-2024-10-16 09:28:27,510 - build - dataframe - INFO - Reading rivers_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/rivers_defaults.csv
-2024-10-16 09:28:27,522 - build - branches - INFO - Processing branches
-2024-10-16 09:28:27,522 - build - branches - DEBUG - Cleaning up branches
-2024-10-16 09:28:27,526 - build - branches - DEBUG - Exploding branches.
-2024-10-16 09:28:27,527 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
-2024-10-16 09:28:27,528 - build - branches - DEBUG - Removing 1 branches that are shorter than 0.1 meter.
-2024-10-16 09:28:27,530 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
-2024-10-16 09:28:27,535 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
-2024-10-16 09:28:27,536 - build - branches - DEBUG - Performing snapping at all branch ends, excluding intersections(To avoid messy results, please use a lower snap_offset)..
-2024-10-16 09:28:27,536 - build - branches - DEBUG - Splitting branches based on spacing
-2024-10-16 09:28:27,537 - build - branches - DEBUG - clipping branches into 5 segments
-2024-10-16 09:28:27,538 - build - branches - DEBUG - Generating branchnodes
-2024-10-16 09:28:27,542 - build - branches - INFO - Validating branches
-2024-10-16 09:28:27,543 - build - crosssections - INFO - Adding/Filling branches attributes values
-2024-10-16 09:28:27,546 - build - dflowfm - INFO - Preparing crossections from branch.
-2024-10-16 09:28:27,556 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
-2024-10-16 09:28:27,556 - build - dflowfm - DEBUG - Adding rivers and river_nodes vector to geoms.
-2024-10-16 09:28:27,559 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:28:27,560 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:28:27,560 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.pipes_fn: grip_roads
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.pipes_defaults_fn: pipes_defaults
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.pipe_filter: pipe
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.spacing: 50
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.friction_type: WhiteColeBrook
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.friction_value: 0.003
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.crosssections_shape: circle
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.crosssections_value: 0.5
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.dem_fn: merit_hydro
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.pipes_depth: 2.0
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.pipes_invlev: 3.0
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.snap_offset: 0.5
-2024-10-16 09:28:27,628 - build - model_api - INFO - setup_pipes.allow_intersection_snapping: True
-2024-10-16 09:28:27,628 - build - dflowfm - INFO - Preparing 1D pipes.
-2024-10-16 09:28:27,631 - build - geodataframe - INFO - Reading grip_roads vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/grip_roads.gpkg
-2024-10-16 09:28:27,648 - build - geodataframe - DEBUG - Clip intersects [1384046.361, 5855359.290, 1393853.608, 5866809.259] (EPSG:3857)
-2024-10-16 09:28:27,649 - build - dataframe - INFO - Reading pipes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/pipes_defaults.csv
-2024-10-16 09:28:27,655 - build - branches - INFO - Processing branches
-2024-10-16 09:28:27,657 - build - branches - DEBUG - Cleaning up branches
-2024-10-16 09:28:27,663 - build - branches - DEBUG - Exploding branches.
-2024-10-16 09:28:27,665 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
-2024-10-16 09:28:27,665 - build - branches - DEBUG - Removing 0 branches that are shorter than 0.1 meter.
-2024-10-16 09:28:27,677 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
-2024-10-16 09:28:27,704 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
-2024-10-16 09:28:27,709 - build - branches - DEBUG - Performing snapping at all branch ends, including intersections(To avoid messy results, please use a lower snap_offset).
-2024-10-16 09:28:27,710 - build - branches - DEBUG - Splitting branches based on spacing
-2024-10-16 09:28:29,676 - build - branches - DEBUG - clipping branches into 2826 segments
-2024-10-16 09:28:29,676 - build - branches - DEBUG - Generating branchnodes
-2024-10-16 09:28:30,106 - build - branches - INFO - Validating branches
-2024-10-16 09:28:30,108 - build - crosssections - INFO - Adding/Filling branches attributes values
-2024-10-16 09:28:30,122 - build - dflowfm - INFO - grip_roads does not have columns [invlev_up, invlev_dn].Invert levels will be generated from dem_fn ordefault value 3.0
-2024-10-16 09:28:30,123 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:28:30,141 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:28:30,585 - build - dflowfm - INFO - Preparing crossections from branch.
-2024-10-16 09:28:30,655 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
-2024-10-16 09:28:30,675 - build - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:28:30,675 - build - dflowfm - DEBUG - Adding pipes and pipe_nodes vector to geoms.
-2024-10-16 09:28:31,123 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:28:31,125 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:28:31,125 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:28:31,125 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:28:31,125 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:28:32,248 - build - model_mesh - WARNING - Overwriting grid network1d and the corresponding data variables in mesh.
-2024-10-16 09:28:32,298 - build - model_mesh - WARNING - Overwriting grid mesh1d and the corresponding data variables in mesh.
-2024-10-16 09:28:32,518 - build - model_api - WARNING - Replacing geom: boundaries
-2024-10-16 09:28:32,519 - build - model_api - INFO - setup_manholes.manholes_fn: None
-2024-10-16 09:28:32,519 - build - model_api - INFO - setup_manholes.manhole_defaults_fn: manholes_defaults
-2024-10-16 09:28:32,519 - build - model_api - INFO - setup_manholes.bedlevel_shift: 0.5
-2024-10-16 09:28:32,519 - build - model_api - INFO - setup_manholes.dem_fn: merit_hydro
-2024-10-16 09:28:32,519 - build - model_api - INFO - setup_manholes.snap_offset: 0.001
-2024-10-16 09:28:32,519 - build - dflowfm - INFO - generating manholes locations and bedlevels.
-2024-10-16 09:28:32,519 - build - manholes - INFO - Generating manholes on pipes and/or tunnels
-2024-10-16 09:28:32,759 - build - manholes - INFO - Shifting manholes bedlevels based on bedlevel_shift = 0.5
-2024-10-16 09:28:32,944 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:28:32,945 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:28:32,946 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:28:32,946 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:28:32,946 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:28:32,946 - build - dataframe - INFO - Reading manholes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/storages/manholes_defaults.csv
-2024-10-16 09:28:32,957 - build - dflowfm - INFO - overwriting manholes street level from dem.
-2024-10-16 09:28:32,957 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:28:32,976 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:28:32,992 - build - dflowfm - DEBUG - street level mean is 863.6583862304688
-2024-10-16 09:28:32,992 - build - dflowfm - DEBUG - dropping duplicated manholeid
-2024-10-16 09:28:33,036 - build - dflowfm - DEBUG - Adding manholes vector to geoms.
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundaries_geodataset_fn: None
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundaries_timeseries_fn: None
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundary_value: -2.0
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.branch_type: river
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundary_type: waterlevel
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundary_unit: m
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.boundary_locs: both
-2024-10-16 09:28:33,036 - build - model_api - INFO - setup_1dboundary.snap_offset: 1.0
-2024-10-16 09:28:33,036 - build - dflowfm - INFO - Preparing 1D waterlevel boundaries for river.
-2024-10-16 09:28:33,037 - build - boundaries - INFO - Using constant value -2.0 mfor all waterlevel boundaries.
-2024-10-16 09:28:33,038 - build - model_api - INFO - setup_mesh2d.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:28:33,038 - build - model_api - INFO - setup_mesh2d.res: 500
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.raster_fn: merit_hydro
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.variables: [&#39;elevtn&#39;]
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.fill_method: nearest
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.reproject_method: nearest
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.interpolation_method: nearestNb
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.locationtype: 2d
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.name: None
-2024-10-16 09:28:33,087 - build - model_api - INFO - setup_maps_from_rasterdataset.split_dataset: True
-2024-10-16 09:28:33,087 - build - model_api - INFO - Preparing maps data from raster source merit_hydro
-2024-10-16 09:28:33,088 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:28:33,105 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.523, 46.538] (epsg:4326))
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.raster_fn: vito_2015
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_table_fn: vito_mapping
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_variables: [&#39;roughness_manning&#39;, &#39;infiltcap&#39;]
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.fill_method: None
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.reproject_method: nearest
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.interpolation_method: triangulation
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.locationtype: 2d
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.name: None
-2024-10-16 09:28:33,130 - build - model_api - INFO - setup_maps_from_raster_reclass.split_dataset: True
-2024-10-16 09:28:33,130 - build - model_api - INFO - Preparing map data by reclassifying the data in vito_2015 based on vito_mapping
-2024-10-16 09:28:33,130 - build - rasterdataset - INFO - Reading vito_2015 raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/vito.tif
-2024-10-16 09:28:33,145 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.523, 46.538] (epsg:4326))
-2024-10-16 09:28:33,146 - build - dataframe - INFO - Reading vito_mapping csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/landuse/vito_mapping.csv
+2024-10-16 09:44:45,487 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
+2024-10-16 09:44:45,487 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
+2024-10-16 09:44:45,493 - build - dflowfm - INFO - Initialising empty mdu file
+2024-10-16 09:44:45,497 - build - dflowfm - INFO - project crs: 3857
+2024-10-16 09:44:45,497 - build - model_api - INFO - setup_rivers_from_dem.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.hydrography_fn: merit_hydro
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.river_geom_fn: hydro_rivers_lin
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.rivers_defaults_fn: rivers_defaults
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.rivdph_method: gvf
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.rivwth_method: geom
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.river_upa: 25.0
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.river_len: 1000
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.min_rivwth: 50.0
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.min_rivdph: 1.0
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.rivbank: True
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.rivbankq: 25
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.segment_length: 3000.0
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.smooth_length: 10000.0
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.friction_type: Manning
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.friction_value: 0.023
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.constrain_rivbed: True
+2024-10-16 09:44:45,498 - build - model_api - INFO - setup_rivers_from_dem.constrain_estuary: True
+2024-10-16 09:44:45,498 - build - dflowfm - INFO - Preparing river shape from hydrography data.
+2024-10-16 09:44:45,505 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:44:45,625 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:44:45,627 - build - geodataframe - INFO - Reading hydro_rivers_lin vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/rivers_lin2019_v1.gpkg
+2024-10-16 09:44:45,657 - build - geodataframe - DEBUG - Clip intersects [1384045.361, 5855358.290, 1393854.608, 5866810.259] (EPSG:3857)
+2024-10-16 09:44:53,164 - build - dem - INFO - Deriving bankfull river surface elevation from its banks.
+2024-10-16 09:44:59,781 - build - dem - INFO - Smoothing river width (n=2).
+2024-10-16 09:45:01,295 - build - dataframe - INFO - Reading rivers_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/rivers_defaults.csv
+2024-10-16 09:45:01,306 - build - branches - INFO - Processing branches
+2024-10-16 09:45:01,307 - build - branches - DEBUG - Cleaning up branches
+2024-10-16 09:45:01,311 - build - branches - DEBUG - Exploding branches.
+2024-10-16 09:45:01,312 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
+2024-10-16 09:45:01,312 - build - branches - DEBUG - Removing 1 branches that are shorter than 0.1 meter.
+2024-10-16 09:45:01,315 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
+2024-10-16 09:45:01,319 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
+2024-10-16 09:45:01,321 - build - branches - DEBUG - Performing snapping at all branch ends, excluding intersections(To avoid messy results, please use a lower snap_offset)..
+2024-10-16 09:45:01,321 - build - branches - DEBUG - Splitting branches based on spacing
+2024-10-16 09:45:01,322 - build - branches - DEBUG - clipping branches into 5 segments
+2024-10-16 09:45:01,323 - build - branches - DEBUG - Generating branchnodes
+2024-10-16 09:45:01,327 - build - branches - INFO - Validating branches
+2024-10-16 09:45:01,328 - build - crosssections - INFO - Adding/Filling branches attributes values
+2024-10-16 09:45:01,331 - build - dflowfm - INFO - Preparing crossections from branch.
+2024-10-16 09:45:01,340 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
+2024-10-16 09:45:01,340 - build - dflowfm - DEBUG - Adding rivers and river_nodes vector to geoms.
+2024-10-16 09:45:01,343 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:01,344 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:01,344 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:01,411 - build - model_api - INFO - setup_pipes.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:45:01,411 - build - model_api - INFO - setup_pipes.pipes_fn: grip_roads
+2024-10-16 09:45:01,411 - build - model_api - INFO - setup_pipes.pipes_defaults_fn: pipes_defaults
+2024-10-16 09:45:01,411 - build - model_api - INFO - setup_pipes.pipe_filter: pipe
+2024-10-16 09:45:01,411 - build - model_api - INFO - setup_pipes.spacing: 50
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.friction_type: WhiteColeBrook
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.friction_value: 0.003
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.crosssections_shape: circle
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.crosssections_value: 0.5
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.dem_fn: merit_hydro
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.pipes_depth: 2.0
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.pipes_invlev: 3.0
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.snap_offset: 0.5
+2024-10-16 09:45:01,412 - build - model_api - INFO - setup_pipes.allow_intersection_snapping: True
+2024-10-16 09:45:01,412 - build - dflowfm - INFO - Preparing 1D pipes.
+2024-10-16 09:45:01,415 - build - geodataframe - INFO - Reading grip_roads vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/grip_roads.gpkg
+2024-10-16 09:45:01,432 - build - geodataframe - DEBUG - Clip intersects [1384046.361, 5855359.290, 1393853.608, 5866809.259] (EPSG:3857)
+2024-10-16 09:45:01,433 - build - dataframe - INFO - Reading pipes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/pipes_defaults.csv
+2024-10-16 09:45:01,439 - build - branches - INFO - Processing branches
+2024-10-16 09:45:01,442 - build - branches - DEBUG - Cleaning up branches
+2024-10-16 09:45:01,448 - build - branches - DEBUG - Exploding branches.
+2024-10-16 09:45:01,449 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
+2024-10-16 09:45:01,450 - build - branches - DEBUG - Removing 0 branches that are shorter than 0.1 meter.
+2024-10-16 09:45:01,462 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
+2024-10-16 09:45:01,490 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
+2024-10-16 09:45:01,495 - build - branches - DEBUG - Performing snapping at all branch ends, including intersections(To avoid messy results, please use a lower snap_offset).
+2024-10-16 09:45:01,495 - build - branches - DEBUG - Splitting branches based on spacing
+2024-10-16 09:45:03,392 - build - branches - DEBUG - clipping branches into 2826 segments
+2024-10-16 09:45:03,392 - build - branches - DEBUG - Generating branchnodes
+2024-10-16 09:45:03,811 - build - branches - INFO - Validating branches
+2024-10-16 09:45:03,813 - build - crosssections - INFO - Adding/Filling branches attributes values
+2024-10-16 09:45:03,828 - build - dflowfm - INFO - grip_roads does not have columns [invlev_up, invlev_dn].Invert levels will be generated from dem_fn ordefault value 3.0
+2024-10-16 09:45:03,828 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:03,846 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:45:04,260 - build - dflowfm - INFO - Preparing crossections from branch.
+2024-10-16 09:45:04,327 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
+2024-10-16 09:45:04,347 - build - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:45:04,347 - build - dflowfm - DEBUG - Adding pipes and pipe_nodes vector to geoms.
+2024-10-16 09:45:04,778 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:04,779 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:04,779 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:04,780 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:04,780 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:05,858 - build - model_mesh - WARNING - Overwriting grid network1d and the corresponding data variables in mesh.
+2024-10-16 09:45:05,907 - build - model_mesh - WARNING - Overwriting grid mesh1d and the corresponding data variables in mesh.
+2024-10-16 09:45:06,123 - build - model_api - WARNING - Replacing geom: boundaries
+2024-10-16 09:45:06,124 - build - model_api - INFO - setup_manholes.manholes_fn: None
+2024-10-16 09:45:06,124 - build - model_api - INFO - setup_manholes.manhole_defaults_fn: manholes_defaults
+2024-10-16 09:45:06,124 - build - model_api - INFO - setup_manholes.bedlevel_shift: 0.5
+2024-10-16 09:45:06,124 - build - model_api - INFO - setup_manholes.dem_fn: merit_hydro
+2024-10-16 09:45:06,124 - build - model_api - INFO - setup_manholes.snap_offset: 0.001
+2024-10-16 09:45:06,124 - build - dflowfm - INFO - generating manholes locations and bedlevels.
+2024-10-16 09:45:06,124 - build - manholes - INFO - Generating manholes on pipes and/or tunnels
+2024-10-16 09:45:06,357 - build - manholes - INFO - Shifting manholes bedlevels based on bedlevel_shift = 0.5
+2024-10-16 09:45:06,537 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:06,539 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:06,539 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:06,539 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:06,539 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:06,539 - build - dataframe - INFO - Reading manholes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/storages/manholes_defaults.csv
+2024-10-16 09:45:06,550 - build - dflowfm - INFO - overwriting manholes street level from dem.
+2024-10-16 09:45:06,550 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:06,568 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:45:06,585 - build - dflowfm - DEBUG - street level mean is 863.6583862304688
+2024-10-16 09:45:06,585 - build - dflowfm - DEBUG - dropping duplicated manholeid
+2024-10-16 09:45:06,626 - build - dflowfm - DEBUG - Adding manholes vector to geoms.
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundaries_geodataset_fn: None
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundaries_timeseries_fn: None
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundary_value: -2.0
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.branch_type: river
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundary_type: waterlevel
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundary_unit: m
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.boundary_locs: both
+2024-10-16 09:45:06,627 - build - model_api - INFO - setup_1dboundary.snap_offset: 1.0
+2024-10-16 09:45:06,627 - build - dflowfm - INFO - Preparing 1D waterlevel boundaries for river.
+2024-10-16 09:45:06,628 - build - boundaries - INFO - Using constant value -2.0 mfor all waterlevel boundaries.
+2024-10-16 09:45:06,629 - build - model_api - INFO - setup_mesh2d.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:45:06,629 - build - model_api - INFO - setup_mesh2d.res: 500
+2024-10-16 09:45:06,676 - build - model_api - INFO - setup_maps_from_rasterdataset.raster_fn: merit_hydro
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.variables: [&#39;elevtn&#39;]
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.fill_method: nearest
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.reproject_method: nearest
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.interpolation_method: nearestNb
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.locationtype: 2d
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.name: None
+2024-10-16 09:45:06,677 - build - model_api - INFO - setup_maps_from_rasterdataset.split_dataset: True
+2024-10-16 09:45:06,677 - build - model_api - INFO - Preparing maps data from raster source merit_hydro
+2024-10-16 09:45:06,677 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:06,694 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.523, 46.538] (epsg:4326))
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.raster_fn: vito_2015
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_table_fn: vito_mapping
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_variables: [&#39;roughness_manning&#39;, &#39;infiltcap&#39;]
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.fill_method: None
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.reproject_method: nearest
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.interpolation_method: triangulation
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.locationtype: 2d
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.name: None
+2024-10-16 09:45:06,719 - build - model_api - INFO - setup_maps_from_raster_reclass.split_dataset: True
+2024-10-16 09:45:06,719 - build - model_api - INFO - Preparing map data by reclassifying the data in vito_2015 based on vito_mapping
+2024-10-16 09:45:06,719 - build - rasterdataset - INFO - Reading vito_2015 raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/vito.tif
+2024-10-16 09:45:06,735 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.523, 46.538] (epsg:4326))
+2024-10-16 09:45:06,736 - build - dataframe - INFO - Reading vito_mapping csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/landuse/vito_mapping.csv
 The nodata value None is not in the reclass table.None will be used for the params.
-2024-10-16 09:28:33,231 - build - model_api - INFO - setup_rainfall_from_constant.constant_value: 150
-2024-10-16 09:28:33,232 - build - dflowfm - INFO - Preparing rainfall meteo forcing from uniform timeseries.
-2024-10-16 09:28:33,233 - build - boundaries - INFO - Preparing global (spatially uniform) timeseries.
-2024-10-16 09:28:33,233 - build - boundaries - WARNING - time unit days is not supported by the current GUI version: 2022.04
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.link_direction: 1d_to_2d
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.link_type: embedded
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.polygon_fn: None
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.branch_type: None
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.max_length: inf
-2024-10-16 09:28:33,235 - build - model_api - INFO - setup_link1d2d.dist_factor: 2.0
-2024-10-16 09:28:33,235 - build - dflowfm - WARNING - adding 1d2d links for all branches at non boundary locations.
-2024-10-16 09:28:33,235 - build - dflowfm - INFO - setting up 1d_to_2d links.
-2024-10-16 09:28:33,489 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d
-2024-10-16 09:28:33,489 - build - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/maps
-2024-10-16 09:28:33,564 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
-2024-10-16 09:28:33,800 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
-2024-10-16 09:28:33,812 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
-2024-10-16 09:28:33,821 - build - model_api - DEBUG - Writing file geoms/branches.geojson
-2024-10-16 09:28:34,006 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
-2024-10-16 09:28:34,021 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
-2024-10-16 09:28:34,202 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
-2024-10-16 09:28:34,504 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
-2024-10-16 09:28:34,630 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:28:34,637 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
-2024-10-16 09:28:34,705 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
-2024-10-16 09:28:34,817 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
-2024-10-16 09:28:34,890 - build - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
-2024-10-16 09:28:35,310 - build - dflowfm - INFO - Writting friction file(s)
-2024-10-16 09:28:35,315 - build - dflowfm - INFO - Writting manholes file.
-2024-10-16 09:28:35,664 - build - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:28:35,664 - build - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:28:35,665 - build - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:28:35,677 - build - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:28:35,680 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:28:35,681 - build - model_api - WARNING - Replacing geom: rivers_nodes
-2024-10-16 09:28:35,691 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:28:35,694 - build - model_api - WARNING - Replacing geom: boundaries
-2024-10-16 09:28:35,703 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:28:35,710 - build - model_api - WARNING - Replacing geom: pipe_nodes
-2024-10-16 09:28:35,718 - build - model_api - WARNING - Replacing geom: manholes
-2024-10-16 09:28:35,718 - build - model_api - WARNING - Replacing geom: region
-2024-10-16 09:28:35,718 - build - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:28:35,719 - build - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:28:35,719 - build - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:28:35,719 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
-2024-10-16 09:28:35,952 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
-2024-10-16 09:28:35,963 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
-2024-10-16 09:28:35,972 - build - model_api - DEBUG - Writing file geoms/branches.geojson
-2024-10-16 09:28:36,154 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
-2024-10-16 09:28:36,168 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
-2024-10-16 09:28:36,348 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
-2024-10-16 09:28:36,653 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
-2024-10-16 09:28:36,778 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:28:36,786 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
-2024-10-16 09:28:36,852 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
-2024-10-16 09:28:36,963 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
-2024-10-16 09:28:37,555 - build - dflowfm - INFO - Writting branches.gui file
-2024-10-16 09:28:37,903 - build - dflowfm - INFO - Writting forcing files.
-2024-10-16 09:28:38,934 - build - dflowfm - INFO - Initialising empty dimr file
-2024-10-16 09:28:38,934 - build - dflowfm - INFO - Adding dflowfm component to dimr config
-2024-10-16 09:28:38,935 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/dimr_config.xml
+2024-10-16 09:45:06,820 - build - model_api - INFO - setup_rainfall_from_constant.constant_value: 150
+2024-10-16 09:45:06,820 - build - dflowfm - INFO - Preparing rainfall meteo forcing from uniform timeseries.
+2024-10-16 09:45:06,822 - build - boundaries - INFO - Preparing global (spatially uniform) timeseries.
+2024-10-16 09:45:06,822 - build - boundaries - WARNING - time unit days is not supported by the current GUI version: 2022.04
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.link_direction: 1d_to_2d
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.link_type: embedded
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.polygon_fn: None
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.branch_type: None
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.max_length: inf
+2024-10-16 09:45:06,824 - build - model_api - INFO - setup_link1d2d.dist_factor: 2.0
+2024-10-16 09:45:06,824 - build - dflowfm - WARNING - adding 1d2d links for all branches at non boundary locations.
+2024-10-16 09:45:06,824 - build - dflowfm - INFO - setting up 1d_to_2d links.
+2024-10-16 09:45:07,067 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d
+2024-10-16 09:45:07,067 - build - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/maps
+2024-10-16 09:45:07,142 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
+2024-10-16 09:45:07,376 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
+2024-10-16 09:45:07,387 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
+2024-10-16 09:45:07,396 - build - model_api - DEBUG - Writing file geoms/branches.geojson
+2024-10-16 09:45:07,578 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
+2024-10-16 09:45:07,592 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
+2024-10-16 09:45:07,774 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
+2024-10-16 09:45:08,075 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
+2024-10-16 09:45:08,201 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:08,208 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
+2024-10-16 09:45:08,276 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
+2024-10-16 09:45:08,388 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
+2024-10-16 09:45:08,462 - build - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
+2024-10-16 09:45:08,868 - build - dflowfm - INFO - Writting friction file(s)
+2024-10-16 09:45:08,873 - build - dflowfm - INFO - Writting manholes file.
+2024-10-16 09:45:09,215 - build - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:45:09,215 - build - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:45:09,216 - build - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:45:09,228 - build - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:45:09,230 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:09,232 - build - model_api - WARNING - Replacing geom: rivers_nodes
+2024-10-16 09:45:09,241 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:09,243 - build - model_api - WARNING - Replacing geom: boundaries
+2024-10-16 09:45:09,253 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:09,260 - build - model_api - WARNING - Replacing geom: pipe_nodes
+2024-10-16 09:45:09,267 - build - model_api - WARNING - Replacing geom: manholes
+2024-10-16 09:45:09,268 - build - model_api - WARNING - Replacing geom: region
+2024-10-16 09:45:09,268 - build - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:45:09,269 - build - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:45:09,269 - build - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:45:09,269 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
+2024-10-16 09:45:09,503 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
+2024-10-16 09:45:09,515 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
+2024-10-16 09:45:09,524 - build - model_api - DEBUG - Writing file geoms/branches.geojson
+2024-10-16 09:45:09,706 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
+2024-10-16 09:45:09,719 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
+2024-10-16 09:45:09,901 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
+2024-10-16 09:45:10,197 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
+2024-10-16 09:45:10,323 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:10,329 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
+2024-10-16 09:45:10,395 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
+2024-10-16 09:45:10,505 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
+2024-10-16 09:45:11,094 - build - dflowfm - INFO - Writting branches.gui file
+2024-10-16 09:45:11,415 - build - dflowfm - INFO - Writting forcing files.
+2024-10-16 09:45:12,435 - build - dflowfm - INFO - Initialising empty dimr file
+2024-10-16 09:45:12,436 - build - dflowfm - INFO - Adding dflowfm component to dimr config
+2024-10-16 09:45:12,436 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d2d/dimr_config.xml
 
 </pre></div></div>
 </div>
diff --git a/dev/_examples/build_1dmodel.html b/dev/_examples/build_1dmodel.html
index 166774b..834bf1a 100644
--- a/dev/_examples/build_1dmodel.html
+++ b/dev/_examples/build_1dmodel.html
@@ -615,183 +615,183 @@ <h2>Building a 1D Delft3D FM model<a class="headerlink" href="#Building-a-1D-Del
 </div>
 <div class="output_area docutils container">
 <div class="highlight"><pre>
-2024-10-16 09:28:47,733 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d/hydromt.log.
-2024-10-16 09:28:47,733 - build - log - INFO - HydroMT version: 0.10.0
-2024-10-16 09:28:47,733 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d.
-2024-10-16 09:28:47,733 - build - main - INFO - User settings:
-2024-10-16 09:28:48,472 - build - data_catalog - INFO - Reading data catalog artifact_data latest
-2024-10-16 09:28:48,472 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
-2024-10-16 09:28:49,092 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
-2024-10-16 09:28:49,092 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
-2024-10-16 09:28:49,097 - build - dflowfm - INFO - Initialising empty mdu file
-2024-10-16 09:28:49,101 - build - dflowfm - INFO - project crs: 3857
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.hydrography_fn: merit_hydro
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.river_geom_fn: hydro_rivers_lin
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.rivers_defaults_fn: rivers_defaults
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.rivdph_method: gvf
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.rivwth_method: geom
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.river_upa: 25.0
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.river_len: 1000
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.min_rivwth: 50.0
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.min_rivdph: 1.0
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.rivbank: True
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.rivbankq: 25
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.segment_length: 3000.0
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.smooth_length: 10000.0
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.friction_type: Manning
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.friction_value: 0.023
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.constrain_rivbed: True
-2024-10-16 09:28:49,102 - build - model_api - INFO - setup_rivers_from_dem.constrain_estuary: True
-2024-10-16 09:28:49,103 - build - dflowfm - INFO - Preparing river shape from hydrography data.
-2024-10-16 09:28:49,109 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:28:49,229 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:28:49,232 - build - geodataframe - INFO - Reading hydro_rivers_lin vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/rivers_lin2019_v1.gpkg
-2024-10-16 09:28:49,261 - build - geodataframe - DEBUG - Clip intersects [1384045.361, 5855358.290, 1393854.608, 5866810.259] (EPSG:3857)
-2024-10-16 09:28:56,880 - build - dem - INFO - Deriving bankfull river surface elevation from its banks.
-2024-10-16 09:29:03,539 - build - dem - INFO - Smoothing river width (n=2).
-2024-10-16 09:29:05,080 - build - dataframe - INFO - Reading rivers_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/rivers_defaults.csv
-2024-10-16 09:29:05,092 - build - branches - INFO - Processing branches
-2024-10-16 09:29:05,092 - build - branches - DEBUG - Cleaning up branches
-2024-10-16 09:29:05,096 - build - branches - DEBUG - Exploding branches.
-2024-10-16 09:29:05,097 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
-2024-10-16 09:29:05,098 - build - branches - DEBUG - Removing 1 branches that are shorter than 0.1 meter.
-2024-10-16 09:29:05,101 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
-2024-10-16 09:29:05,105 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
-2024-10-16 09:29:05,106 - build - branches - DEBUG - Performing snapping at all branch ends, excluding intersections(To avoid messy results, please use a lower snap_offset)..
-2024-10-16 09:29:05,106 - build - branches - DEBUG - Splitting branches based on spacing
-2024-10-16 09:29:05,108 - build - branches - DEBUG - clipping branches into 5 segments
-2024-10-16 09:29:05,108 - build - branches - DEBUG - Generating branchnodes
-2024-10-16 09:29:05,112 - build - branches - INFO - Validating branches
-2024-10-16 09:29:05,114 - build - crosssections - INFO - Adding/Filling branches attributes values
-2024-10-16 09:29:05,116 - build - dflowfm - INFO - Preparing crossections from branch.
-2024-10-16 09:29:05,126 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
-2024-10-16 09:29:05,126 - build - dflowfm - DEBUG - Adding rivers and river_nodes vector to geoms.
-2024-10-16 09:29:05,128 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:29:05,129 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:29:05,130 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:29:05,196 - build - model_api - INFO - setup_pipes.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:29:05,196 - build - model_api - INFO - setup_pipes.pipes_fn: grip_roads
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.pipes_defaults_fn: pipes_defaults
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.pipe_filter: pipe
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.spacing: 50
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.friction_type: WhiteColeBrook
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.friction_value: 0.003
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.crosssections_shape: circle
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.crosssections_value: 0.5
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.dem_fn: merit_hydro
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.pipes_depth: 2.0
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.pipes_invlev: 3.0
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.snap_offset: 0.5
-2024-10-16 09:29:05,197 - build - model_api - INFO - setup_pipes.allow_intersection_snapping: True
-2024-10-16 09:29:05,197 - build - dflowfm - INFO - Preparing 1D pipes.
-2024-10-16 09:29:05,200 - build - geodataframe - INFO - Reading grip_roads vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/grip_roads.gpkg
-2024-10-16 09:29:05,217 - build - geodataframe - DEBUG - Clip intersects [1384046.361, 5855359.290, 1393853.608, 5866809.259] (EPSG:3857)
-2024-10-16 09:29:05,218 - build - dataframe - INFO - Reading pipes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/pipes_defaults.csv
-2024-10-16 09:29:05,224 - build - branches - INFO - Processing branches
-2024-10-16 09:29:05,226 - build - branches - DEBUG - Cleaning up branches
-2024-10-16 09:29:05,232 - build - branches - DEBUG - Exploding branches.
-2024-10-16 09:29:05,233 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
-2024-10-16 09:29:05,234 - build - branches - DEBUG - Removing 0 branches that are shorter than 0.1 meter.
-2024-10-16 09:29:05,246 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
-2024-10-16 09:29:05,273 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
-2024-10-16 09:29:05,277 - build - branches - DEBUG - Performing snapping at all branch ends, including intersections(To avoid messy results, please use a lower snap_offset).
-2024-10-16 09:29:05,278 - build - branches - DEBUG - Splitting branches based on spacing
-2024-10-16 09:29:07,178 - build - branches - DEBUG - clipping branches into 2826 segments
-2024-10-16 09:29:07,179 - build - branches - DEBUG - Generating branchnodes
-2024-10-16 09:29:07,604 - build - branches - INFO - Validating branches
-2024-10-16 09:29:07,606 - build - crosssections - INFO - Adding/Filling branches attributes values
-2024-10-16 09:29:07,620 - build - dflowfm - INFO - grip_roads does not have columns [invlev_up, invlev_dn].Invert levels will be generated from dem_fn ordefault value 3.0
-2024-10-16 09:29:07,620 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:29:07,639 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:29:08,062 - build - dflowfm - INFO - Preparing crossections from branch.
-2024-10-16 09:29:08,132 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
-2024-10-16 09:29:08,152 - build - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:29:08,152 - build - dflowfm - DEBUG - Adding pipes and pipe_nodes vector to geoms.
-2024-10-16 09:29:08,586 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:29:08,588 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:29:08,589 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:29:08,589 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:29:08,589 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:29:09,729 - build - model_mesh - WARNING - Overwriting grid network1d and the corresponding data variables in mesh.
-2024-10-16 09:29:09,780 - build - model_mesh - WARNING - Overwriting grid mesh1d and the corresponding data variables in mesh.
-2024-10-16 09:29:09,999 - build - model_api - WARNING - Replacing geom: boundaries
-2024-10-16 09:29:10,000 - build - model_api - INFO - setup_manholes.manholes_fn: None
-2024-10-16 09:29:10,000 - build - model_api - INFO - setup_manholes.manhole_defaults_fn: manholes_defaults
-2024-10-16 09:29:10,000 - build - model_api - INFO - setup_manholes.bedlevel_shift: 0.5
-2024-10-16 09:29:10,000 - build - model_api - INFO - setup_manholes.dem_fn: merit_hydro
-2024-10-16 09:29:10,000 - build - model_api - INFO - setup_manholes.snap_offset: 0.001
-2024-10-16 09:29:10,000 - build - dflowfm - INFO - generating manholes locations and bedlevels.
-2024-10-16 09:29:10,000 - build - manholes - INFO - Generating manholes on pipes and/or tunnels
-2024-10-16 09:29:10,236 - build - manholes - INFO - Shifting manholes bedlevels based on bedlevel_shift = 0.5
-2024-10-16 09:29:10,417 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:29:10,418 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:29:10,418 - build - dflowfm - DEBUG - Adding branches vector to geoms.
-2024-10-16 09:29:10,418 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:29:10,419 - build - dflowfm - DEBUG - Updating branches in network.
-2024-10-16 09:29:10,419 - build - dataframe - INFO - Reading manholes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/storages/manholes_defaults.csv
-2024-10-16 09:29:10,430 - build - dflowfm - INFO - overwriting manholes street level from dem.
-2024-10-16 09:29:10,430 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:29:10,448 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
-2024-10-16 09:29:10,464 - build - dflowfm - DEBUG - street level mean is 863.6583862304688
-2024-10-16 09:29:10,464 - build - dflowfm - DEBUG - dropping duplicated manholeid
-2024-10-16 09:29:10,506 - build - dflowfm - DEBUG - Adding manholes vector to geoms.
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundaries_geodataset_fn: None
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundaries_timeseries_fn: None
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundary_value: -2.0
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.branch_type: river
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundary_type: waterlevel
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundary_unit: m
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.boundary_locs: both
-2024-10-16 09:29:10,507 - build - model_api - INFO - setup_1dboundary.snap_offset: 1.0
-2024-10-16 09:29:10,507 - build - dflowfm - INFO - Preparing 1D waterlevel boundaries for river.
-2024-10-16 09:29:10,508 - build - boundaries - INFO - Using constant value -2.0 mfor all waterlevel boundaries.
-2024-10-16 09:29:10,509 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d
-2024-10-16 09:29:10,516 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
-2024-10-16 09:29:10,749 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
-2024-10-16 09:29:10,761 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
-2024-10-16 09:29:10,770 - build - model_api - DEBUG - Writing file geoms/branches.geojson
-2024-10-16 09:29:10,955 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
-2024-10-16 09:29:10,970 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
-2024-10-16 09:29:11,151 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
-2024-10-16 09:29:11,452 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:29:11,460 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
-2024-10-16 09:29:11,586 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
-2024-10-16 09:29:11,656 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
-2024-10-16 09:29:11,767 - build - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
-2024-10-16 09:29:12,182 - build - dflowfm - INFO - Writting friction file(s)
-2024-10-16 09:29:12,187 - build - dflowfm - INFO - Writting manholes file.
-2024-10-16 09:29:12,529 - build - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:29:12,530 - build - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:29:12,543 - build - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:29:12,546 - build - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:29:12,547 - build - model_api - WARNING - Replacing geom: rivers_nodes
-2024-10-16 09:29:12,556 - build - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:29:12,560 - build - model_api - WARNING - Replacing geom: boundaries
-2024-10-16 09:29:12,569 - build - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:29:12,576 - build - model_api - WARNING - Replacing geom: pipe_nodes
-2024-10-16 09:29:12,576 - build - model_api - WARNING - Replacing geom: region
-2024-10-16 09:29:12,584 - build - model_api - WARNING - Replacing geom: manholes
-2024-10-16 09:29:12,584 - build - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:29:12,585 - build - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:29:12,585 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
-2024-10-16 09:29:12,822 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
-2024-10-16 09:29:12,834 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
-2024-10-16 09:29:12,843 - build - model_api - DEBUG - Writing file geoms/branches.geojson
-2024-10-16 09:29:13,027 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
-2024-10-16 09:29:13,042 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
-2024-10-16 09:29:13,222 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
-2024-10-16 09:29:13,520 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:29:13,528 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
-2024-10-16 09:29:13,655 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
-2024-10-16 09:29:13,723 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
-2024-10-16 09:29:14,034 - build - dflowfm - INFO - Writting branches.gui file
-2024-10-16 09:29:14,368 - build - dflowfm - INFO - Writting forcing files.
-2024-10-16 09:29:15,383 - build - dflowfm - INFO - Initialising empty dimr file
+2024-10-16 09:45:20,929 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d/hydromt.log.
+2024-10-16 09:45:20,929 - build - log - INFO - HydroMT version: 0.10.0
+2024-10-16 09:45:20,929 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d.
+2024-10-16 09:45:20,929 - build - main - INFO - User settings:
+2024-10-16 09:45:21,674 - build - data_catalog - INFO - Reading data catalog artifact_data latest
+2024-10-16 09:45:21,675 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
+2024-10-16 09:45:22,311 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
+2024-10-16 09:45:22,311 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
+2024-10-16 09:45:22,316 - build - dflowfm - INFO - Initialising empty mdu file
+2024-10-16 09:45:22,321 - build - dflowfm - INFO - project crs: 3857
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.hydrography_fn: merit_hydro
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.river_geom_fn: hydro_rivers_lin
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.rivers_defaults_fn: rivers_defaults
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.rivdph_method: gvf
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.rivwth_method: geom
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.river_upa: 25.0
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.river_len: 1000
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.min_rivwth: 50.0
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.min_rivdph: 1.0
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.rivbank: True
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.rivbankq: 25
+2024-10-16 09:45:22,321 - build - model_api - INFO - setup_rivers_from_dem.segment_length: 3000.0
+2024-10-16 09:45:22,322 - build - model_api - INFO - setup_rivers_from_dem.smooth_length: 10000.0
+2024-10-16 09:45:22,322 - build - model_api - INFO - setup_rivers_from_dem.friction_type: Manning
+2024-10-16 09:45:22,322 - build - model_api - INFO - setup_rivers_from_dem.friction_value: 0.023
+2024-10-16 09:45:22,322 - build - model_api - INFO - setup_rivers_from_dem.constrain_rivbed: True
+2024-10-16 09:45:22,322 - build - model_api - INFO - setup_rivers_from_dem.constrain_estuary: True
+2024-10-16 09:45:22,322 - build - dflowfm - INFO - Preparing river shape from hydrography data.
+2024-10-16 09:45:22,328 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:22,448 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:45:22,451 - build - geodataframe - INFO - Reading hydro_rivers_lin vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/rivers_lin2019_v1.gpkg
+2024-10-16 09:45:22,480 - build - geodataframe - DEBUG - Clip intersects [1384045.361, 5855358.290, 1393854.608, 5866810.259] (EPSG:3857)
+2024-10-16 09:45:29,979 - build - dem - INFO - Deriving bankfull river surface elevation from its banks.
+2024-10-16 09:45:36,586 - build - dem - INFO - Smoothing river width (n=2).
+2024-10-16 09:45:38,117 - build - dataframe - INFO - Reading rivers_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/rivers_defaults.csv
+2024-10-16 09:45:38,129 - build - branches - INFO - Processing branches
+2024-10-16 09:45:38,129 - build - branches - DEBUG - Cleaning up branches
+2024-10-16 09:45:38,133 - build - branches - DEBUG - Exploding branches.
+2024-10-16 09:45:38,134 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
+2024-10-16 09:45:38,135 - build - branches - DEBUG - Removing 1 branches that are shorter than 0.1 meter.
+2024-10-16 09:45:38,138 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
+2024-10-16 09:45:38,143 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
+2024-10-16 09:45:38,144 - build - branches - DEBUG - Performing snapping at all branch ends, excluding intersections(To avoid messy results, please use a lower snap_offset)..
+2024-10-16 09:45:38,144 - build - branches - DEBUG - Splitting branches based on spacing
+2024-10-16 09:45:38,145 - build - branches - DEBUG - clipping branches into 5 segments
+2024-10-16 09:45:38,146 - build - branches - DEBUG - Generating branchnodes
+2024-10-16 09:45:38,150 - build - branches - INFO - Validating branches
+2024-10-16 09:45:38,151 - build - crosssections - INFO - Adding/Filling branches attributes values
+2024-10-16 09:45:38,154 - build - dflowfm - INFO - Preparing crossections from branch.
+2024-10-16 09:45:38,164 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
+2024-10-16 09:45:38,164 - build - dflowfm - DEBUG - Adding rivers and river_nodes vector to geoms.
+2024-10-16 09:45:38,167 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:38,168 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:38,168 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.pipes_fn: grip_roads
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.pipes_defaults_fn: pipes_defaults
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.pipe_filter: pipe
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.spacing: 50
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.friction_type: WhiteColeBrook
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.friction_value: 0.003
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.crosssections_shape: circle
+2024-10-16 09:45:38,235 - build - model_api - INFO - setup_pipes.crosssections_value: 0.5
+2024-10-16 09:45:38,236 - build - model_api - INFO - setup_pipes.dem_fn: merit_hydro
+2024-10-16 09:45:38,236 - build - model_api - INFO - setup_pipes.pipes_depth: 2.0
+2024-10-16 09:45:38,236 - build - model_api - INFO - setup_pipes.pipes_invlev: 3.0
+2024-10-16 09:45:38,236 - build - model_api - INFO - setup_pipes.snap_offset: 0.5
+2024-10-16 09:45:38,236 - build - model_api - INFO - setup_pipes.allow_intersection_snapping: True
+2024-10-16 09:45:38,236 - build - dflowfm - INFO - Preparing 1D pipes.
+2024-10-16 09:45:38,239 - build - geodataframe - INFO - Reading grip_roads vector data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/grip_roads.gpkg
+2024-10-16 09:45:38,255 - build - geodataframe - DEBUG - Clip intersects [1384046.361, 5855359.290, 1393853.608, 5866809.259] (EPSG:3857)
+2024-10-16 09:45:38,256 - build - dataframe - INFO - Reading pipes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/branches/pipes_defaults.csv
+2024-10-16 09:45:38,262 - build - branches - INFO - Processing branches
+2024-10-16 09:45:38,264 - build - branches - DEBUG - Cleaning up branches
+2024-10-16 09:45:38,271 - build - branches - DEBUG - Exploding branches.
+2024-10-16 09:45:38,272 - build - branches - DEBUG - Removing 0 branches which have duplicated geometry.
+2024-10-16 09:45:38,273 - build - branches - DEBUG - Removing 0 branches that are shorter than 0.1 meter.
+2024-10-16 09:45:38,284 - build - branches - DEBUG - Renaming 0 id_col duplicates. Convention:BRANCH_1, BRANCH_1 --&gt; BRANCH_1, BRANCH_1-2.
+2024-10-16 09:45:38,310 - build - branches - DEBUG - Reducing precision of the GeoDataFrame.Rounding precision (e-6) .
+2024-10-16 09:45:38,315 - build - branches - DEBUG - Performing snapping at all branch ends, including intersections(To avoid messy results, please use a lower snap_offset).
+2024-10-16 09:45:38,316 - build - branches - DEBUG - Splitting branches based on spacing
+2024-10-16 09:45:40,186 - build - branches - DEBUG - clipping branches into 2826 segments
+2024-10-16 09:45:40,186 - build - branches - DEBUG - Generating branchnodes
+2024-10-16 09:45:40,604 - build - branches - INFO - Validating branches
+2024-10-16 09:45:40,606 - build - crosssections - INFO - Adding/Filling branches attributes values
+2024-10-16 09:45:40,620 - build - dflowfm - INFO - grip_roads does not have columns [invlev_up, invlev_dn].Invert levels will be generated from dem_fn ordefault value 3.0
+2024-10-16 09:45:40,620 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:40,639 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:45:41,057 - build - dflowfm - INFO - Preparing crossections from branch.
+2024-10-16 09:45:41,125 - build - dflowfm - DEBUG - Adding crosssections vector to geoms.
+2024-10-16 09:45:41,145 - build - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:45:41,145 - build - dflowfm - DEBUG - Adding pipes and pipe_nodes vector to geoms.
+2024-10-16 09:45:41,585 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:41,587 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:41,587 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:41,587 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:41,588 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:42,701 - build - model_mesh - WARNING - Overwriting grid network1d and the corresponding data variables in mesh.
+2024-10-16 09:45:42,752 - build - model_mesh - WARNING - Overwriting grid mesh1d and the corresponding data variables in mesh.
+2024-10-16 09:45:42,972 - build - model_api - WARNING - Replacing geom: boundaries
+2024-10-16 09:45:42,973 - build - model_api - INFO - setup_manholes.manholes_fn: None
+2024-10-16 09:45:42,973 - build - model_api - INFO - setup_manholes.manhole_defaults_fn: manholes_defaults
+2024-10-16 09:45:42,973 - build - model_api - INFO - setup_manholes.bedlevel_shift: 0.5
+2024-10-16 09:45:42,973 - build - model_api - INFO - setup_manholes.dem_fn: merit_hydro
+2024-10-16 09:45:42,973 - build - model_api - INFO - setup_manholes.snap_offset: 0.001
+2024-10-16 09:45:42,973 - build - dflowfm - INFO - generating manholes locations and bedlevels.
+2024-10-16 09:45:42,973 - build - manholes - INFO - Generating manholes on pipes and/or tunnels
+2024-10-16 09:45:43,211 - build - manholes - INFO - Shifting manholes bedlevels based on bedlevel_shift = 0.5
+2024-10-16 09:45:43,393 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:43,395 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:43,395 - build - dflowfm - DEBUG - Adding branches vector to geoms.
+2024-10-16 09:45:43,395 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:43,395 - build - dflowfm - DEBUG - Updating branches in network.
+2024-10-16 09:45:43,395 - build - dataframe - INFO - Reading manholes_defaults csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/storages/manholes_defaults.csv
+2024-10-16 09:45:43,406 - build - dflowfm - INFO - overwriting manholes street level from dem.
+2024-10-16 09:45:43,406 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:43,424 - build - rasterdataset - DEBUG - Clip to [12.433, 46.466, 12.521, 46.537] (epsg:4326))
+2024-10-16 09:45:43,441 - build - dflowfm - DEBUG - street level mean is 863.6583862304688
+2024-10-16 09:45:43,441 - build - dflowfm - DEBUG - dropping duplicated manholeid
+2024-10-16 09:45:43,484 - build - dflowfm - DEBUG - Adding manholes vector to geoms.
+2024-10-16 09:45:43,484 - build - model_api - INFO - setup_1dboundary.boundaries_geodataset_fn: None
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.boundaries_timeseries_fn: None
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.boundary_value: -2.0
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.branch_type: river
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.boundary_type: waterlevel
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.boundary_unit: m
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.boundary_locs: both
+2024-10-16 09:45:43,485 - build - model_api - INFO - setup_1dboundary.snap_offset: 1.0
+2024-10-16 09:45:43,485 - build - dflowfm - INFO - Preparing 1D waterlevel boundaries for river.
+2024-10-16 09:45:43,486 - build - boundaries - INFO - Using constant value -2.0 mfor all waterlevel boundaries.
+2024-10-16 09:45:43,487 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d
+2024-10-16 09:45:43,494 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
+2024-10-16 09:45:43,729 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
+2024-10-16 09:45:43,741 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
+2024-10-16 09:45:43,750 - build - model_api - DEBUG - Writing file geoms/branches.geojson
+2024-10-16 09:45:43,933 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
+2024-10-16 09:45:43,947 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
+2024-10-16 09:45:44,123 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
+2024-10-16 09:45:44,419 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:44,427 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
+2024-10-16 09:45:44,552 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
+2024-10-16 09:45:44,619 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
+2024-10-16 09:45:44,728 - build - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
+2024-10-16 09:45:45,137 - build - dflowfm - INFO - Writting friction file(s)
+2024-10-16 09:45:45,142 - build - dflowfm - INFO - Writting manholes file.
+2024-10-16 09:45:45,482 - build - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:45:45,483 - build - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:45:45,496 - build - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:45:45,499 - build - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:45:45,500 - build - model_api - WARNING - Replacing geom: rivers_nodes
+2024-10-16 09:45:45,509 - build - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:45:45,512 - build - model_api - WARNING - Replacing geom: boundaries
+2024-10-16 09:45:45,521 - build - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:45:45,529 - build - model_api - WARNING - Replacing geom: pipe_nodes
+2024-10-16 09:45:45,529 - build - model_api - WARNING - Replacing geom: region
+2024-10-16 09:45:45,536 - build - model_api - WARNING - Replacing geom: manholes
+2024-10-16 09:45:45,537 - build - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:45:45,538 - build - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:45:45,538 - build - model_api - DEBUG - Writing file geoms/crosssections.geojson
+2024-10-16 09:45:45,771 - build - model_api - DEBUG - Writing file geoms/rivers.geojson
+2024-10-16 09:45:45,783 - build - model_api - DEBUG - Writing file geoms/rivers_nodes.geojson
+2024-10-16 09:45:45,792 - build - model_api - DEBUG - Writing file geoms/branches.geojson
+2024-10-16 09:45:45,974 - build - model_api - DEBUG - Writing file geoms/boundaries.geojson
+2024-10-16 09:45:45,988 - build - model_api - DEBUG - Writing file geoms/pipes.geojson
+2024-10-16 09:45:46,169 - build - model_api - DEBUG - Writing file geoms/pipe_nodes.geojson
+2024-10-16 09:45:46,462 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:46,469 - build - model_api - DEBUG - Writing file geoms/manholes.geojson
+2024-10-16 09:45:46,592 - build - model_api - DEBUG - Writing file geoms/network1d.geojson
+2024-10-16 09:45:46,659 - build - model_api - DEBUG - Writing file geoms/mesh1d.geojson
+2024-10-16 09:45:46,965 - build - dflowfm - INFO - Writting branches.gui file
+2024-10-16 09:45:47,300 - build - dflowfm - INFO - Writting forcing files.
+2024-10-16 09:45:48,315 - build - dflowfm - INFO - Initialising empty dimr file
 INFO:build:Initialising empty dimr file
-2024-10-16 09:29:15,384 - build - dflowfm - INFO - Adding dflowfm component to dimr config
+2024-10-16 09:45:48,316 - build - dflowfm - INFO - Adding dflowfm component to dimr config
 INFO:build:Adding dflowfm component to dimr config
-2024-10-16 09:29:15,384 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d/dimr_config.xml
+2024-10-16 09:45:48,316 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d/dimr_config.xml
 INFO:build:Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_1d/dimr_config.xml
 
 </pre></div></div>
diff --git a/dev/_examples/build_2dmodel.html b/dev/_examples/build_2dmodel.html
index b318ba8..09aaa83 100644
--- a/dev/_examples/build_2dmodel.html
+++ b/dev/_examples/build_2dmodel.html
@@ -593,62 +593,62 @@ <h2>Building a 2D Delft3D FM model<a class="headerlink" href="#Building-a-2D-Del
 </div>
 <div class="output_area docutils container">
 <div class="highlight"><pre>
-2024-10-16 09:29:24,194 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/hydromt.log.
-2024-10-16 09:29:24,194 - build - log - INFO - HydroMT version: 0.10.0
-2024-10-16 09:29:24,194 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d.
-2024-10-16 09:29:24,194 - build - main - INFO - User settings:
-2024-10-16 09:29:24,941 - build - data_catalog - INFO - Reading data catalog artifact_data latest
-2024-10-16 09:29:24,941 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
-2024-10-16 09:29:25,563 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
-2024-10-16 09:29:25,564 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
-2024-10-16 09:29:25,569 - build - dflowfm - INFO - Initialising empty mdu file
-2024-10-16 09:29:25,573 - build - dflowfm - INFO - project crs: 3857
-2024-10-16 09:29:25,574 - build - model_api - INFO - setup_mesh2d.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
-2024-10-16 09:29:25,574 - build - model_api - INFO - setup_mesh2d.res: 500
-2024-10-16 09:29:25,605 - build - model_api - INFO - setup_maps_from_rasterdataset.raster_fn: merit_hydro
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.variables: [&#39;elevtn&#39;]
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.fill_method: nearest
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.reproject_method: nearest
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.interpolation_method: nearestNb
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.locationtype: 2d
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.name: None
-2024-10-16 09:29:25,606 - build - model_api - INFO - setup_maps_from_rasterdataset.split_dataset: True
-2024-10-16 09:29:25,606 - build - model_api - INFO - Preparing maps data from raster source merit_hydro
-2024-10-16 09:29:25,607 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
-2024-10-16 09:29:25,633 - build - rasterdataset - DEBUG - Clip to [12.433, 46.467, 12.523, 46.538] (epsg:4326))
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.raster_fn: vito_2015
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_table_fn: vito_mapping
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_variables: [&#39;roughness_manning&#39;, &#39;infiltcap&#39;]
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.fill_method: None
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.reproject_method: nearest
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.interpolation_method: triangulation
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.locationtype: 2d
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.name: None
-2024-10-16 09:29:25,782 - build - model_api - INFO - setup_maps_from_raster_reclass.split_dataset: True
-2024-10-16 09:29:25,782 - build - model_api - INFO - Preparing map data by reclassifying the data in vito_2015 based on vito_mapping
-2024-10-16 09:29:25,783 - build - rasterdataset - INFO - Reading vito_2015 raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/vito.tif
-2024-10-16 09:29:25,798 - build - rasterdataset - DEBUG - Clip to [12.433, 46.467, 12.523, 46.538] (epsg:4326))
-2024-10-16 09:29:25,799 - build - dataframe - INFO - Reading vito_mapping csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/landuse/vito_mapping.csv
+2024-10-16 09:45:56,942 - build - log - DEBUG - Writing log messages to new file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/hydromt.log.
+2024-10-16 09:45:56,942 - build - log - INFO - HydroMT version: 0.10.0
+2024-10-16 09:45:56,942 - build - main - INFO - Building instance of dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d.
+2024-10-16 09:45:56,942 - build - main - INFO - User settings:
+2024-10-16 09:45:57,686 - build - data_catalog - INFO - Reading data catalog artifact_data latest
+2024-10-16 09:45:57,686 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.9/data_catalog.yml
+2024-10-16 09:45:58,304 - build - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
+2024-10-16 09:45:58,304 - build - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
+2024-10-16 09:45:58,310 - build - dflowfm - INFO - Initialising empty mdu file
+2024-10-16 09:45:58,314 - build - dflowfm - INFO - project crs: 3857
+2024-10-16 09:45:58,314 - build - model_api - INFO - setup_mesh2d.region: {&#39;bbox&#39;: [12.4331, 46.4661, 12.5212, 46.5369]}
+2024-10-16 09:45:58,314 - build - model_api - INFO - setup_mesh2d.res: 500
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.raster_fn: merit_hydro
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.variables: [&#39;elevtn&#39;]
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.fill_method: nearest
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.reproject_method: nearest
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.interpolation_method: nearestNb
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.locationtype: 2d
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.name: None
+2024-10-16 09:45:58,346 - build - model_api - INFO - setup_maps_from_rasterdataset.split_dataset: True
+2024-10-16 09:45:58,346 - build - model_api - INFO - Preparing maps data from raster source merit_hydro
+2024-10-16 09:45:58,347 - build - rasterdataset - INFO - Reading merit_hydro raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/merit_hydro/{variable}.tif
+2024-10-16 09:45:58,373 - build - rasterdataset - DEBUG - Clip to [12.433, 46.467, 12.523, 46.538] (epsg:4326))
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.raster_fn: vito_2015
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_table_fn: vito_mapping
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.reclass_variables: [&#39;roughness_manning&#39;, &#39;infiltcap&#39;]
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.fill_method: None
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.reproject_method: nearest
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.interpolation_method: triangulation
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.locationtype: 2d
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.name: None
+2024-10-16 09:45:58,521 - build - model_api - INFO - setup_maps_from_raster_reclass.split_dataset: True
+2024-10-16 09:45:58,521 - build - model_api - INFO - Preparing map data by reclassifying the data in vito_2015 based on vito_mapping
+2024-10-16 09:45:58,522 - build - rasterdataset - INFO - Reading vito_2015 raster data from /home/runner/.hydromt_data/artifact_data/v0.0.9/data.tar/vito.tif
+2024-10-16 09:45:58,537 - build - rasterdataset - DEBUG - Clip to [12.433, 46.467, 12.523, 46.538] (epsg:4326))
+2024-10-16 09:45:58,538 - build - dataframe - INFO - Reading vito_mapping csv data from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/landuse/vito_mapping.csv
 The nodata value None is not in the reclass table.None will be used for the params.
-2024-10-16 09:29:25,894 - build - model_api - INFO - setup_rainfall_from_constant.constant_value: 150
-2024-10-16 09:29:25,894 - build - dflowfm - INFO - Preparing rainfall meteo forcing from uniform timeseries.
-2024-10-16 09:29:25,897 - build - boundaries - INFO - Preparing global (spatially uniform) timeseries.
-2024-10-16 09:29:25,897 - build - boundaries - WARNING - time unit days is not supported by the current GUI version: 2022.04
-2024-10-16 09:29:25,899 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d
-2024-10-16 09:29:25,899 - build - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/maps
-2024-10-16 09:29:25,966 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:29:25,989 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
-2024-10-16 09:29:26,065 - build - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:29:26,065 - build - model_api - WARNING - Replacing geom: region
-2024-10-16 09:29:26,066 - build - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:29:26,066 - build - model_api - DEBUG - Writing file geoms/region.geojson
-2024-10-16 09:29:26,072 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
-2024-10-16 09:29:26,377 - build - dflowfm - INFO - Writting forcing files.
-2024-10-16 09:29:26,407 - build - dflowfm - INFO - Initialising empty dimr file
+2024-10-16 09:45:58,624 - build - model_api - INFO - setup_rainfall_from_constant.constant_value: 150
+2024-10-16 09:45:58,624 - build - dflowfm - INFO - Preparing rainfall meteo forcing from uniform timeseries.
+2024-10-16 09:45:58,626 - build - boundaries - INFO - Preparing global (spatially uniform) timeseries.
+2024-10-16 09:45:58,626 - build - boundaries - WARNING - time unit days is not supported by the current GUI version: 2022.04
+2024-10-16 09:45:58,628 - build - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d
+2024-10-16 09:45:58,628 - build - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/maps
+2024-10-16 09:45:58,682 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:58,705 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
+2024-10-16 09:45:58,781 - build - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:45:58,782 - build - model_api - WARNING - Replacing geom: region
+2024-10-16 09:45:58,782 - build - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:45:58,782 - build - model_api - DEBUG - Writing file geoms/region.geojson
+2024-10-16 09:45:58,788 - build - model_api - DEBUG - Writing file geoms/mesh2d.geojson
+2024-10-16 09:45:59,094 - build - dflowfm - INFO - Writting forcing files.
+2024-10-16 09:45:59,124 - build - dflowfm - INFO - Initialising empty dimr file
 INFO:build:Initialising empty dimr file
-2024-10-16 09:29:26,407 - build - dflowfm - INFO - Adding dflowfm component to dimr config
+2024-10-16 09:45:59,124 - build - dflowfm - INFO - Adding dflowfm component to dimr config
 INFO:build:Adding dflowfm component to dimr config
-2024-10-16 09:29:26,407 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/dimr_config.xml
+2024-10-16 09:45:59,124 - build - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/dimr_config.xml
 INFO:build:Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_2d/dimr_config.xml
 
 </pre></div></div>
diff --git a/dev/_examples/update_refine_2dgrid.html b/dev/_examples/update_refine_2dgrid.html
index d88f13a..89a3f5e 100644
--- a/dev/_examples/update_refine_2dgrid.html
+++ b/dev/_examples/update_refine_2dgrid.html
@@ -581,65 +581,65 @@ <h2>Update a 1D2D Delft3D FM model to refine the 2D mesh<a class="headerlink" hr
 </div>
 <div class="output_area docutils container">
 <div class="highlight"><pre>
-2024-10-16 09:29:44,415 - update - log - INFO - HydroMT version: 0.10.0
-2024-10-16 09:29:44,415 - update - main - INFO - Updating dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave (r).
-2024-10-16 09:29:44,415 - update - main - INFO - Output dir: /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine
-2024-10-16 09:29:44,415 - update - main - INFO - User settings:
-2024-10-16 09:29:45,132 - update - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
-2024-10-16 09:29:45,133 - update - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
-2024-10-16 09:29:45,138 - update - dflowfm - INFO - Reading mdu file at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave/dflowfm/DFlowFM.mdu
-2024-10-16 09:29:46,168 - update - dflowfm - INFO - project crs: 3857
-2024-10-16 09:29:46,168 - update - dflowfm - INFO - Reading model data from /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave
-2024-10-16 09:29:46,168 - update - dflowfm - INFO - Reading dimr file at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave/dimr_config.xml
-2024-10-16 09:29:47,608 - update - dflowfm - INFO - Reading branches GUI file
-2024-10-16 09:29:47,808 - update - dflowfm - INFO - Reading cross-sections files
-2024-10-16 09:29:47,852 - update - dflowfm - INFO - Reading manholes file
-2024-10-16 09:29:47,958 - update - model_api - WARNING - Replacing result: elevtn
-2024-10-16 09:29:47,964 - update - model_api - WARNING - Replacing result: infiltcap
-2024-10-16 09:29:47,971 - update - model_api - WARNING - Replacing result: roughness_manning
-2024-10-16 09:29:47,976 - update - model_api - WARNING - Replacing geom: region
-2024-10-16 09:29:47,976 - update - dflowfm - INFO - Reading cross-sections files
-2024-10-16 09:29:48,021 - update - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:29:48,021 - update - dflowfm - INFO - Reading manholes file
-2024-10-16 09:29:48,085 - update - model_api - WARNING - Replacing geom: manholes
-2024-10-16 09:29:48,201 - update - model_api - WARNING - Replacing forcing: boundary1d_waterlevelbndbnd
-2024-10-16 09:29:48,201 - update - dflowfm - INFO - project crs: 3857
-2024-10-16 09:29:48,202 - update - model_api - INFO - setup_mesh2d_refine.polygon_fn: /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson
-2024-10-16 09:29:48,202 - update - model_api - INFO - setup_mesh2d_refine.sample_fn: None
-2024-10-16 09:29:48,202 - update - model_api - INFO - setup_mesh2d_refine.steps: 2
-2024-10-16 09:29:48,202 - update - dflowfm - INFO - reading geometry from file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson.
-2024-10-16 09:29:48,203 - update - geodataframe - INFO - Reading  vector data from /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson
-2024-10-16 09:29:48,252 - update - mesh - INFO - 2d mesh refined based on polygon.Number of faces before: 460 and after: 828
-2024-10-16 09:29:48,254 - update - model_mesh - WARNING - Overwriting grid mesh2d and the corresponding data variables in mesh.
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.link_direction: 1d_to_2d
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.link_type: embedded
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.polygon_fn: None
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.branch_type: None
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.max_length: inf
-2024-10-16 09:29:48,391 - update - model_api - INFO - setup_link1d2d.dist_factor: 2.0
-2024-10-16 09:29:48,391 - update - dflowfm - WARNING - adding 1d2d links for all branches at non boundary locations.
-2024-10-16 09:29:48,391 - update - dflowfm - INFO - setting up 1d_to_2d links.
-2024-10-16 09:29:48,675 - update - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine
-2024-10-16 09:29:48,675 - update - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine/maps
-2024-10-16 09:29:49,641 - update - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
-2024-10-16 09:29:50,220 - update - dflowfm - INFO - Writting friction file(s)
-2024-10-16 09:29:50,226 - update - dflowfm - INFO - Writting manholes file.
-2024-10-16 09:29:50,579 - update - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:29:50,580 - update - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:29:50,580 - update - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:29:50,594 - update - model_api - WARNING - Replacing geom: crosssections
-2024-10-16 09:29:50,600 - update - model_api - WARNING - Replacing geom: manholes
-2024-10-16 09:29:50,601 - update - model_api - WARNING - Replacing geom: rivers
-2024-10-16 09:29:50,604 - update - model_api - WARNING - Replacing geom: pipes
-2024-10-16 09:29:50,606 - update - model_api - WARNING - Replacing geom: branches
-2024-10-16 09:29:50,606 - update - model_api - WARNING - Replacing geom: region
-2024-10-16 09:29:50,607 - update - model_api - WARNING - Replacing geom: mesh1d
-2024-10-16 09:29:50,608 - update - model_api - WARNING - Replacing geom: network1d
-2024-10-16 09:29:50,608 - update - model_api - WARNING - Replacing geom: mesh2d
-2024-10-16 09:29:52,045 - update - dflowfm - INFO - Writting branches.gui file
-2024-10-16 09:29:52,220 - update - dflowfm - INFO - Writting forcing files.
-2024-10-16 09:29:53,348 - update - dflowfm - INFO - Adding dflowfm component to dimr config
-2024-10-16 09:29:53,353 - update - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine/dimr_config.xml
+2024-10-16 09:46:16,102 - update - log - INFO - HydroMT version: 0.10.0
+2024-10-16 09:46:16,102 - update - main - INFO - Updating dflowfm model at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave (r).
+2024-10-16 09:46:16,102 - update - main - INFO - Output dir: /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine
+2024-10-16 09:46:16,102 - update - main - INFO - User settings:
+2024-10-16 09:46:16,824 - update - model_api - INFO - Initializing dflowfm model from hydromt_delft3dfm (v0.2.1.dev0).
+2024-10-16 09:46:16,825 - update - data_catalog - INFO - Parsing data catalog from /usr/share/miniconda/envs/hydromt-delft3dfm/lib/python3.9/site-packages/hydromt_delft3dfm/data/parameters_data.yml
+2024-10-16 09:46:16,830 - update - dflowfm - INFO - Reading mdu file at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave/dflowfm/DFlowFM.mdu
+2024-10-16 09:46:17,864 - update - dflowfm - INFO - project crs: 3857
+2024-10-16 09:46:17,865 - update - dflowfm - INFO - Reading model data from /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave
+2024-10-16 09:46:17,865 - update - dflowfm - INFO - Reading dimr file at /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/dflowfm_piave/dimr_config.xml
+2024-10-16 09:46:19,300 - update - dflowfm - INFO - Reading branches GUI file
+2024-10-16 09:46:19,501 - update - dflowfm - INFO - Reading cross-sections files
+2024-10-16 09:46:19,545 - update - dflowfm - INFO - Reading manholes file
+2024-10-16 09:46:19,653 - update - model_api - WARNING - Replacing result: elevtn
+2024-10-16 09:46:19,659 - update - model_api - WARNING - Replacing result: infiltcap
+2024-10-16 09:46:19,666 - update - model_api - WARNING - Replacing result: roughness_manning
+2024-10-16 09:46:19,671 - update - model_api - WARNING - Replacing geom: region
+2024-10-16 09:46:19,671 - update - dflowfm - INFO - Reading cross-sections files
+2024-10-16 09:46:19,717 - update - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:46:19,717 - update - dflowfm - INFO - Reading manholes file
+2024-10-16 09:46:19,782 - update - model_api - WARNING - Replacing geom: manholes
+2024-10-16 09:46:19,901 - update - model_api - WARNING - Replacing forcing: boundary1d_waterlevelbndbnd
+2024-10-16 09:46:19,901 - update - dflowfm - INFO - project crs: 3857
+2024-10-16 09:46:19,902 - update - model_api - INFO - setup_mesh2d_refine.polygon_fn: /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson
+2024-10-16 09:46:19,902 - update - model_api - INFO - setup_mesh2d_refine.sample_fn: None
+2024-10-16 09:46:19,902 - update - model_api - INFO - setup_mesh2d_refine.steps: 2
+2024-10-16 09:46:19,902 - update - dflowfm - INFO - reading geometry from file /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson.
+2024-10-16 09:46:19,903 - update - geodataframe - INFO - Reading  vector data from /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/data/refine.geojson
+2024-10-16 09:46:19,952 - update - mesh - INFO - 2d mesh refined based on polygon.Number of faces before: 460 and after: 828
+2024-10-16 09:46:19,954 - update - model_mesh - WARNING - Overwriting grid mesh2d and the corresponding data variables in mesh.
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.link_direction: 1d_to_2d
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.link_type: embedded
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.polygon_fn: None
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.branch_type: None
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.max_length: inf
+2024-10-16 09:46:20,093 - update - model_api - INFO - setup_link1d2d.dist_factor: 2.0
+2024-10-16 09:46:20,093 - update - dflowfm - WARNING - adding 1d2d links for all branches at non boundary locations.
+2024-10-16 09:46:20,093 - update - dflowfm - INFO - setting up 1d_to_2d links.
+2024-10-16 09:46:20,382 - update - dflowfm - INFO - Writing model data to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine
+2024-10-16 09:46:20,382 - update - dflowfm - INFO - Writing maps files to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine/maps
+2024-10-16 09:46:21,361 - update - dflowfm - INFO - Writting cross-sections files crsdef and crsloc
+2024-10-16 09:46:21,925 - update - dflowfm - INFO - Writting friction file(s)
+2024-10-16 09:46:21,930 - update - dflowfm - INFO - Writting manholes file.
+2024-10-16 09:46:22,286 - update - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:46:22,287 - update - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:46:22,287 - update - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:46:22,301 - update - model_api - WARNING - Replacing geom: crosssections
+2024-10-16 09:46:22,307 - update - model_api - WARNING - Replacing geom: manholes
+2024-10-16 09:46:22,308 - update - model_api - WARNING - Replacing geom: rivers
+2024-10-16 09:46:22,311 - update - model_api - WARNING - Replacing geom: pipes
+2024-10-16 09:46:22,313 - update - model_api - WARNING - Replacing geom: branches
+2024-10-16 09:46:22,313 - update - model_api - WARNING - Replacing geom: region
+2024-10-16 09:46:22,314 - update - model_api - WARNING - Replacing geom: mesh1d
+2024-10-16 09:46:22,315 - update - model_api - WARNING - Replacing geom: network1d
+2024-10-16 09:46:22,315 - update - model_api - WARNING - Replacing geom: mesh2d
+2024-10-16 09:46:23,771 - update - dflowfm - INFO - Writting branches.gui file
+2024-10-16 09:46:23,946 - update - dflowfm - INFO - Writting forcing files.
+2024-10-16 09:46:25,074 - update - dflowfm - INFO - Adding dflowfm component to dimr config
+2024-10-16 09:46:25,079 - update - dflowfm - INFO - Writing model dimr file to /home/runner/work/hydromt_delft3dfm/hydromt_delft3dfm/docs/_examples/build/dflowfm_mesh2d_refine/dimr_config.xml
 
 </pre></div></div>
 </div>
diff --git a/dev/_generated/hydromt_delft3dfm.graph_utils.gpd_to_digraph.html b/dev/_generated/hydromt_delft3dfm.graph_utils.gpd_to_digraph.html
index fd708cf..b4b3cf1 100644
--- a/dev/_generated/hydromt_delft3dfm.graph_utils.gpd_to_digraph.html
+++ b/dev/_generated/hydromt_delft3dfm.graph_utils.gpd_to_digraph.html
@@ -616,7 +616,7 @@
 <h1>hydromt_delft3dfm.graph_utils.gpd_to_digraph<a class="headerlink" href="#hydromt-delft3dfm-graph-utils-gpd-to-digraph" title="Link to this heading">#</a></h1>
 <dl class="py function">
 <dt class="sig sig-object py" id="hydromt_delft3dfm.graph_utils.gpd_to_digraph">
-<span class="sig-prename descclassname"><span class="pre">hydromt_delft3dfm.graph_utils.</span></span><span class="sig-name descname"><span class="pre">gpd_to_digraph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="p"><span class="pre">:</span></span><span class="w"> </span><span class="n"><a class="reference external" href="https://geopandas.org/en/stable/docs/reference/api/geopandas.GeoDataFrame.html#geopandas.GeoDataFrame" title="(in GeoPandas v1.0.1)"><span class="pre">GeoDataFrame</span></a></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><span class="pre">&lt;networkx.classes.digraph.DiGraph</span> <span class="pre">object</span> <span class="pre">at</span> <span class="pre">0x7fd991d3f370&gt;</span></span></span><a class="reference internal" href="../_modules/hydromt_delft3dfm/graph_utils.html#gpd_to_digraph"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#hydromt_delft3dfm.graph_utils.gpd_to_digraph" title="Link to this definition">#</a></dt>
+<span class="sig-prename descclassname"><span class="pre">hydromt_delft3dfm.graph_utils.</span></span><span class="sig-name descname"><span class="pre">gpd_to_digraph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="p"><span class="pre">:</span></span><span class="w"> </span><span class="n"><a class="reference external" href="https://geopandas.org/en/stable/docs/reference/api/geopandas.GeoDataFrame.html#geopandas.GeoDataFrame" title="(in GeoPandas v1.0.1)"><span class="pre">GeoDataFrame</span></a></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><span class="pre">&lt;networkx.classes.digraph.DiGraph</span> <span class="pre">object</span> <span class="pre">at</span> <span class="pre">0x7f3c9bb7f430&gt;</span></span></span><a class="reference internal" href="../_modules/hydromt_delft3dfm/graph_utils.html#gpd_to_digraph"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#hydromt_delft3dfm.graph_utils.gpd_to_digraph" title="Link to this definition">#</a></dt>
 <dd><p>Convert a <cite>gpd.GeoDataFrame</cite> to a <cite>nx.DiGraph</cite>.</p>
 <p>This is done by taking the first and last coordinate in a row as source and target,
 respectively.</p>
diff --git a/dev/_images/_examples_plot_dflowfm_mesh_10_0.png b/dev/_images/_examples_plot_dflowfm_mesh_10_0.png
index 199268d..13bd4be 100644
Binary files a/dev/_images/_examples_plot_dflowfm_mesh_10_0.png and b/dev/_images/_examples_plot_dflowfm_mesh_10_0.png differ
diff --git a/dev/_images/_examples_plot_dflowfm_mesh_12_0.png b/dev/_images/_examples_plot_dflowfm_mesh_12_0.png
index ca9857b..d6591c0 100644
Binary files a/dev/_images/_examples_plot_dflowfm_mesh_12_0.png and b/dev/_images/_examples_plot_dflowfm_mesh_12_0.png differ
diff --git a/dev/_modules/hydromt_delft3dfm/dflowfm.html b/dev/_modules/hydromt_delft3dfm/dflowfm.html
index 105c0ee..3297c34 100644
--- a/dev/_modules/hydromt_delft3dfm/dflowfm.html
+++ b/dev/_modules/hydromt_delft3dfm/dflowfm.html
@@ -3441,6 +3441,9 @@ <h1>Source code for hydromt_delft3dfm.dflowfm</h1><div class="highlight"><pre>
         <span class="n">mdu</span> <span class="o">=</span> <span class="n">FMModel</span><span class="p">(</span><span class="o">**</span><span class="n">cf_dict</span><span class="p">)</span>
         <span class="c1"># add filepath</span>
         <span class="n">mdu</span><span class="o">.</span><span class="n">filepath</span> <span class="o">=</span> <span class="n">mdu_fn</span>
+        <span class="c1"># temporarily remove sediment section to avoid error in Delft3D FM 1D2D 2024.03</span>
+        <span class="c1"># https://issuetracker.deltares.nl/browse/FM1D2D-3047</span>
+        <span class="k">del</span> <span class="n">mdu</span><span class="o">.</span><span class="n">sediment</span>
         <span class="c1"># write</span>
         <span class="n">mdu</span><span class="o">.</span><span class="n">save</span><span class="p">(</span><span class="n">recurse</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
         <span class="c1"># Go back to working dir</span>
diff --git a/dev/searchindex.js b/dev/searchindex.js
index 2cc15f5..d1294d0 100644
--- a/dev/searchindex.js
+++ b/dev/searchindex.js
@@ -1 +1 @@
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\ No newline at end of file
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\ No newline at end of file