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New robot form term requests for Feofanova PMID 37253714 #2150

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earlEBI opened this issue Dec 7, 2023 · 1 comment
Closed

New robot form term requests for Feofanova PMID 37253714 #2150

earlEBI opened this issue Dec 7, 2023 · 1 comment
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@earlEBI
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earlEBI commented Dec 7, 2023

Link to a webulous form for 106 circulating metabolite terms.
https://docs.google.com/spreadsheets/d/1F0OU7hZO93r7r1XIAID29Cs0rKly0vVU/edit?usp=sharing&ouid=115603389613071004022&rtpof=true&sd=true
In the paper (SupData3), terms are mapped to HMDB IDs only, which I then used the HMDB tool to map to pubchem/chebi... but it didn't pick up matches for all.
Also added a synonym column (includes other labels that were included in the 'metabolite names' column, separated by a ;).
I've only requested those terms which I could not find already existing and which had significant GWAS associations reported, but if there are any terms EFO doesn't think should be created due to lack of information, I can use a higher term.
If I should be requesting eg. definitions differently for OBA terms, please say. Thanks!

@ar-ibrahim
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Term requests with existing CHEBI IDs were created in OBA and have been made available after the January release. All remaining terms were created in EFO and will be available after the February release 3.63.0.

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