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Metalhead dependency messed up packages #281

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alperyilmaz opened this issue Jan 25, 2021 · 3 comments
Closed

Metalhead dependency messed up packages #281

alperyilmaz opened this issue Jan 25, 2021 · 3 comments

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@alperyilmaz
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As mention in #266 tutorials/transfer_learning/transfer_learning.jl uses Metalhead. When I tried to run that file, there were massive changes in packages, as shown below. Some important packages (CUDA, Flux, Images, Plots) were downgraded and I don't know how to upgrade them back. I removed Metalhead but those packages does not update still.

Updating `~/.julia/environments/v1.5/Project.toml`
  [336ed68f] ↑ CSV v0.7.9 ⇒ v0.8.2
  [052768ef] ↓ CUDA v2.1.0 ⇒ v1.3.3
  [587475ba] ↓ Flux v0.11.2 ⇒ v0.11.1
  [7e08b658] ↑ GeometricFlux v0.7.4 ⇒ v0.7.5
  [3ebe565e] ↑ GraphSignals v0.1.8 ⇒ v0.1.12
  [7073ff75] ↑ IJulia v1.23.0 ⇒ v1.23.1
  [916415d5] ↓ Images v0.23.3 ⇒ v0.22.5
  [093fc24a] ↑ LightGraphs v1.3.3 ⇒ v1.3.5
  [dbeba491] + Metalhead v0.5.1
  [d96e819e] ↑ Parameters v0.12.1 ⇒ v0.12.2
  [91a5bcdd] ↓ Plots v1.10.1 ⇒ v1.0.14
  [c3e4b0f8] ↑ Pluto v0.12.10 ⇒ v0.12.18
  [e88e6eb3] ↑ Zygote v0.5.15 ⇒ v0.5.17
Updating `~/.julia/environments/v1.5/Manifest.toml`
  [79e6a3ab] ↑ Adapt v2.3.0 ⇒ v2.4.0
  [ec485272] ↑ ArnoldiMethod v0.0.4 ⇒ v0.1.0
  [4fba245c] + ArrayInterface v2.14.17
  [4c555306] ↑ ArrayLayouts v0.4.11 ⇒ v0.4.12
  [ab4f0b2a] - BFloat16s v0.1.0
  [336ed68f] ↑ CSV v0.7.9 ⇒ v0.8.2
  [052768ef] ↓ CUDA v2.1.0 ⇒ v1.3.3
  [83423d85] - Cairo_jll v1.16.0+6
  [324d7699] - CategoricalArrays v0.8.3
  [082447d4] ↑ ChainRules v0.7.33 ⇒ v0.7.49
  [d360d2e6] ↑ ChainRulesCore v0.9.18 ⇒ v0.9.27
  [cdddcdb0] - ChainRulesTestUtils v0.5.3
  [35d6a980] - ColorSchemes v3.10.2
  [3da002f7] ↓ ColorTypes v0.10.9 ⇒ v0.9.1
  [5ae59095] ↓ Colors v0.12.4 ⇒ v0.11.2
  [34da2185] ↑ Compat v3.23.0 ⇒ v3.25.0
  [adafc99b] - CpuId v0.2.2
  [a8cc5b0e] - Crayons v4.0.4
  [124859b0] ↑ DataDeps v0.7.3 ⇒ v0.7.6
  [a93c6f00] - DataFrames v0.22.0
  [864edb3b] ↑ DataStructures v0.17.20 ⇒ v0.18.9
  [163ba53b] ↑ DiffResults v1.0.2 ⇒ v1.0.3
  [b552c78f] ↑ DiffRules v1.0.1 ⇒ v1.0.2
  [5ae413db] - EarCut_jll v2.1.5+1
  [2e619515] - Expat_jll v2.2.7+6
  [c87230d0] ↓ FFMPEG v0.4.0 ⇒ v0.3.0
  [7a1cc6ca] ↑ FFTW v1.1.0 ⇒ v1.3.0
  [f5851436] + FFTW_jll v3.3.9+7
  [1a297f60] ↑ FillArrays v0.9.7 ⇒ v0.10.2
  [26cc04aa] - FiniteDifferences v0.11.2
  [53c48c17] ↓ FixedPointNumbers v0.8.4 ⇒ v0.7.1
  [587475ba] ↓ Flux v0.11.2 ⇒ v0.11.1
  [a3f928ae] - Fontconfig_jll v2.13.1+14
  [59287772] - Formatting v0.4.1
  [f6369f11] ↑ ForwardDiff v0.10.12 ⇒ v0.10.15
  [fb4132e2] + FuzzyCompletions v0.4.0
  [0656b61e] - GLFW_jll v3.3.2+1
  [0c68f7d7] ↓ GPUArrays v6.1.1 ⇒ v5.2.1
  [61eb1bfa] ↓ GPUCompiler v0.8.3 ⇒ v0.6.1
  [28b8d3ca] ↓ GR v0.53.0 ⇒ v0.48.0
  [d2c73de3] - GR_jll v0.53.0+0
  [7e08b658] ↑ GeometricFlux v0.7.4 ⇒ v0.7.5
  [5c1252a2] - GeometryBasics v0.3.7
  [4d00f742] + GeometryTypes v0.8.4
  [78b55507] - Gettext_jll v0.20.1+7
  [7746bdde] - Glib_jll v2.59.0+4
  [a1251efa] ↑ GraphLaplacians v0.1.0 ⇒ v0.1.1
  [21828b05] ↑ GraphMLDatasets v0.1.1 ⇒ v0.1.2
  [3ebe565e] ↑ GraphSignals v0.1.8 ⇒ v0.1.12
  [f67ccb44] ↑ HDF5 v0.13.6 ⇒ v0.14.3
  [cd3eb016] ↑ HTTP v0.8.19 ⇒ v0.9.2
  [0e44f5e4] + Hwloc v1.2.0
  [e33a78d0] + Hwloc_jll v2.4.0+0
  [7073ff75] ↑ IJulia v1.23.0 ⇒ v1.23.1
  [7869d1d1] ↑ IRTools v0.4.1 ⇒ v0.4.2
  [615f187c] + IfElse v0.1.0
  [2996bd0c] ↓ ImageQualityIndexes v0.2.1 ⇒ v0.1.4
  [916415d5] ↓ Images v0.23.3 ⇒ v0.22.5
  [1d5cc7b8] + IntelOpenMP_jll v2018.0.3+2
  [41ab1584] - InvertedIndices v1.0.0
  [692b3bcd] ↑ JLLWrappers v1.1.3 ⇒ v1.2.0
  [929cbde3] ↓ LLVM v3.4.0 ⇒ v2.0.0
  [dd4b983a] - LZO_jll v2.10.0+3
  [b964fa9f] - LaTeXStrings v1.2.0
  [23fbe1c1] - Latexify v0.14.7
  [e9f186c6] - Libffi_jll v3.2.1+4
  [d4300ac3] - Libgcrypt_jll v1.8.5+4
  [7e76a0d4] - Libglvnd_jll v1.3.0+3
  [7add5ba3] - Libgpg_error_jll v1.36.0+3
  [94ce4f54] - Libiconv_jll v1.16.0+7
  [4b2f31a3] - Libmount_jll v2.34.0+3
  [38a345b3] - Libuuid_jll v2.34.0+7
  [093fc24a] ↑ LightGraphs v1.3.3 ⇒ v1.3.5
  [bdcacae8] ↑ LoopVectorization v0.8.26 ⇒ v0.9.20
  [23992714] ↑ MAT v0.8.1 ⇒ v0.9.2
  [856f044c] + MKL_jll v2020.2.254+0
  [dbb5928d] ↓ MappedArrays v0.3.0 ⇒ v0.2.2
  [dbeba491] + Metalhead v0.5.1
  [46d2c3a1] - MuladdMacro v0.2.2
  [872c559c] ↑ NNlib v0.7.7 ⇒ v0.7.12
  [77ba4419] ↑ NaNMath v0.3.4 ⇒ v0.3.5
  [6fe1bfb0] ↑ OffsetArrays v1.4.0 ⇒ v1.5.1
  [2f80f16e] - PCRE_jll v8.42.0+4
  [d96e819e] ↑ Parameters v0.12.1 ⇒ v0.12.2
  [69de0a69] ↑ Parsers v1.0.12 ⇒ v1.0.15
  [30392449] - Pixman_jll v0.40.0+0
  [ccf2f8ad] ↓ PlotThemes v2.0.0 ⇒ v1.0.3
  [995b91a9] ↓ PlotUtils v1.0.10 ⇒ v0.6.5
  [91a5bcdd] ↓ Plots v1.10.1 ⇒ v1.0.14
  [c3e4b0f8] ↑ Pluto v0.12.10 ⇒ v0.12.18
  [08abe8d2] - PrettyTables v0.10.1
  [438e738f] ↑ PyCall v1.92.1 ⇒ v1.92.2
  [ede63266] - Qt_jll v5.15.2+1
  [01d81517] ↓ RecipesPipeline v0.2.1 ⇒ v0.1.13
  [ae029012] ↑ Requires v1.1.0 ⇒ v1.1.2
  [708f8203] - Richardson v1.2.0
  [21efa798] - SIMDPirates v0.8.26
  [476501e8] ↑ SLEEFPirates v0.5.5 ⇒ v0.6.6
  [b1168b60] ↑ ScatterNNlib v0.1.4 ⇒ v0.1.6
  [6c6a2e73] - Scratch v1.0.3
  [276daf66] ↑ SpecialFunctions v0.10.3 ⇒ v1.2.1
  [09ab397b] - StructArrays v0.4.4
  [856f2bd8] - StructTypes v1.1.0
  [bd369af6] ↑ Tables v1.2.1 ⇒ v1.3.1
  [5c2747f8] + URIs v1.2.0
  [3d5dd08c] ↑ VectorizationBase v0.12.33 ⇒ v0.15.7
  [a2964d1f] - Wayland_jll v1.17.0+4
  [2381bf8a] - Wayland_protocols_jll v1.18.0+4
  [02c8fc9c] - XML2_jll v2.9.10+3
  [aed1982a] - XSLT_jll v1.1.33+4
  [4f6342f7] - Xorg_libX11_jll v1.6.9+4
  [0c0b7dd1] - Xorg_libXau_jll v1.0.9+4
  [935fb764] - Xorg_libXcursor_jll v1.2.0+4
  [a3789734] - Xorg_libXdmcp_jll v1.1.3+4
  [1082639a] - Xorg_libXext_jll v1.3.4+4
  [d091e8ba] - Xorg_libXfixes_jll v5.0.3+4
  [a51aa0fd] - Xorg_libXi_jll v1.7.10+4
  [d1454406] - Xorg_libXinerama_jll v1.1.4+4
  [ec84b674] - Xorg_libXrandr_jll v1.5.2+4
  [ea2f1a96] - Xorg_libXrender_jll v0.9.10+4
  [14d82f49] - Xorg_libpthread_stubs_jll v0.1.0+3
  [c7cfdc94] - Xorg_libxcb_jll v1.13.0+3
  [cc61e674] - Xorg_libxkbfile_jll v1.1.0+4
  [12413925] - Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] - Xorg_xcb_util_jll v0.4.0+1
  [975044d2] - Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] - Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] - Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] - Xorg_xkbcomp_jll v1.4.2+4
  [33bec58e] - Xorg_xkeyboard_config_jll v2.27.0+4
  [c5fb5394] - Xorg_xtrans_jll v1.4.0+3
  [e88e6eb3] ↑ Zygote v0.5.15 ⇒ v0.5.17
  [700de1a5] ↑ ZygoteRules v0.2.0 ⇒ v0.2.1
  [3f19e933] + p7zip_jll v16.2.0+3
  [d8fb68d0] - xkbcommon_jll v0.9.1+5
  [9fa8497b] - Future
   Building IJulia ──→ `~/.julia/packages/IJulia/IDNmS/deps/build.log`
   Building GR ──────→ `~/.julia/packages/GR/yMV3y/deps/build.log`
   Building Plots ───→ `~/.julia/packages/Plots/8GUYs/deps/build.log`
   Building PyCall ──→ `~/.julia/packages/PyCall/tqyST/deps/build.log`
   Building DataDeps → `~/.julia/packages/DataDeps/jrlAW/deps/build.log`
   Building FFTW ────→ `~/.julia/packages/FFTW/ayqyZ/deps/build.log`
   Building HDF5 ────→ `~/.julia/packages/HDF5/d0V7K/deps/build.log`
@DhairyaLGandhi
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DhairyaLGandhi commented Jan 25, 2021 •
edited
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Have you tried with ] up
There's a new release of metalhead, flux so good to try that out

You could also try with ] add [email protected] and see if that's alright

@alperyilmaz
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I did ] up and package manager said that packages are restored but CUDA package started to download the artifacts.. then I ran out of space in home directory.. So, I cleaned .julia folder and then re-installed some of the packages. I was thinking we should inform Metalhead developers about version mismatch but you said there's new version.. That's good..

@DhairyaLGandhi
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Seems like this should be alright with the latest release. Do re-open if you still have issues! Thanks for this!

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@alperyilmaz @DhairyaLGandhi