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Example.txt
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Example.txt
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Copyright (C) <year> Open Microscopy Environment.
# All rights reserved.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License along
# with this program; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
"""
Describe your script here
"""
from omero.gateway import BlitzGateway
from omero.rtypes import rlong, rstring
import omero.scripts as scripts
if __name__ == "__main__":
dataTypes = [rstring('Image')]
client = scripts.client(
'Example.py', """This script ...""",
scripts.String(
"Data_Type", optional=False, grouping="1",
description="Choose source of images (only Image supported)",
values=dataTypes, default="Image"),
scripts.List(
"IDs", optional=False, grouping="2",
description="List of Image IDs to process.").ofType(rlong(0)),
version="0.1",
authors=["Author 1", "Author 2"],
institutions=["The OME Consortium"],
)
try:
conn = BlitzGateway(client_obj=client)
# Do work here including calling functions
# defined above.
client.setOutput("Message", rstring("Success"))
finally:
client.closeSession()