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CRAM support #117

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santoshe1 opened this issue Jun 14, 2022 · 5 comments
Closed

CRAM support #117

santoshe1 opened this issue Jun 14, 2022 · 5 comments
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enhancement New feature or request

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@santoshe1
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Hello,

Thank you for the tool Clair3. I would like to know if Clair3 supports CRAM as input instead of BAM?

Best,
S
@aquaskyline aquaskyline added the enhancement New feature or request label Jun 14, 2022
@aquaskyline
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Scheduled CRAM support in the next update.

@santoshe1
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Thank you, Could you let us know the tentative date for next update @aquaskyline ?

@aquaskyline
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Probably in September. So if in a hurry, could you please try converting CRAM to BAM before feeding it to Clair3. Sorry that we cannot help more.

@santoshe1
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Thank you for the response.

@aquaskyline aquaskyline reopened this Aug 19, 2022
@aquaskyline
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Supported CRAM input in v0.1-r12.

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@aquaskyline @santoshe1