From 713cfd8e9c99e38578e5210b44851fd1da5c0279 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Marius=20W=C3=B6ste?= Date: Wed, 8 Jul 2020 11:27:16 +0200 Subject: [PATCH] Fix bsseq MulticoreParam .. this is the only change necessary for R4.0.2? Suspicously seamless transition. --- snakemake_wrapper/scripts/bsseq.R | 1 + 1 file changed, 1 insertion(+) diff --git a/snakemake_wrapper/scripts/bsseq.R b/snakemake_wrapper/scripts/bsseq.R index be7a20f..159e4b2 100644 --- a/snakemake_wrapper/scripts/bsseq.R +++ b/snakemake_wrapper/scripts/bsseq.R @@ -6,6 +6,7 @@ if (exists("snakemake")) { } library(bsseq) +library(BiocParallel) callDmrs <- function (methylDackelBedGraphFiles, sampleNames, group1Samples, group2Samples, threads, min_cpg, min_diff, localCorrect, rdatFile, csvFile, pdfFile) {