diff --git a/ancestry_pipeline/v1.0/Dockerfile b/ancestry_pipeline/v1.0/Dockerfile index 9f05521..554f905 100644 --- a/ancestry_pipeline/v1.0/Dockerfile +++ b/ancestry_pipeline/v1.0/Dockerfile @@ -94,3 +94,4 @@ RUN wget -O phase3_orig.psam "https://rti-common.s3.us-east-1.amazonaws.com/ance WORKDIR /data ENTRYPOINT [ "/opt/entrypoint.sh" ] + diff --git a/ancestry_pipeline/v1.0/README.md b/ancestry_pipeline/v1.0/README.md index 2639322..36481c9 100644 --- a/ancestry_pipeline/v1.0/README.md +++ b/ancestry_pipeline/v1.0/README.md @@ -6,6 +6,10 @@ docker run ``` + +
+Build instructions + # Prior to build, generate new presigned URLs for reference files in S3 using following code: ``` shell aws s3 presign s3://rti-common/ancestry/smartpca_mahal_pipeline/all_phase3_unique_grch37_dbsnp_b153_ld_pruned.bed --expires-in 172800 @@ -13,4 +17,5 @@ aws s3 presign s3://rti-common/ancestry/smartpca_mahal_pipeline/all_phase3_uniqu aws s3 presign s3://rti-common/ancestry/smartpca_mahal_pipeline/all_phase3_unique_grch37_dbsnp_b153_ld_pruned.fam --expires-in 172800 aws s3 presign s3://rti-common/ancestry/smartpca_mahal_pipeline/1000g_variants.tsv --expires-in 172800 aws s3 presign s3://rti-common/ancestry/smartpca_mahal_pipeline/phase3_orig.psam --expires-in 172800 -``` \ No newline at end of file +``` +