diff --git a/modules/merge_and_uncode_rca_uploads.nf b/modules/merge_and_uncode_rca_uploads.nf index 88bead78..6507da93 100644 --- a/modules/merge_and_uncode_rca_uploads.nf +++ b/modules/merge_and_uncode_rca_uploads.nf @@ -20,13 +20,13 @@ process merge_and_uncode_rca_uploads { if (production) { """ cd /usr/local/src/myscripts/ - Rscript merge_and_uncode_rca_uploads.R -c $cohort -v --production --save_synapse + Rscript merge_and_uncode_rca_uploads.R -c $cohort -v --production --save_synapse -c $comment """ } else { """ cd /usr/local/src/myscripts/ - Rscript merge_and_uncode_rca_uploads.R -c $cohort -v --save_synapse + Rscript merge_and_uncode_rca_uploads.R -c $cohort -v --save_synapse -c $comment """ } } \ No newline at end of file