R-CMD-check.yaml

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
  push:
    branches: [main, master, develop]
  pull_request:
    branches: [main, master]

name: R-CMD-check

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: macos-latest,   r: 'release'}
          # - {os: windows-latest, r: 'release'} # disabled until vol2birdR CRAN release
          - {os: ubuntu-latest,   r: 'devel'}
          - {os: ubuntu-latest,   r: 'release'}
          - {os: ubuntu-latest,   r: 'oldrel-1'}

    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
      R_KEEP_PKG_SOURCE: yes

    steps:
      - uses: actions/checkout@v3

      - uses: r-lib/actions/setup-pandoc@v2

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          http-user-agent: ${{ matrix.config.http-user-agent }}
          use-public-rspm: true

      - name: Install macOS system dependencies
        if: runner.os == 'macOS'
        run: |
          env HOMEBREW_NO_AUTO_UPDATE=1 brew install hdf5 proj gsl

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: any::rcmdcheck
          needs: check

      - name: Install Linux system dependencies
        if: runner.os == 'Linux'
        run: |
          pak::local_system_requirements(execute = TRUE)
          pak::pkg_system_requirements("rcmdcheck", execute = TRUE)
          pak::pkg_system_requirements("proj4", execute = TRUE) # Using same proj for now...
          pak::pkg_system_requirements("hdf5r", execute = TRUE) # Using same hdf5 for now...
        shell: Rscript {0}
      - name: Install dependencies
        run: |
          # set upgrade to FALSE because otherwise several package that are not strict dependencies
          # (like terra) get triggered to build and fail
          pak::local_install_deps(upgrade = FALSE)
          pak::pkg_install("rcmdcheck")
          pak::pkg_install("rmarkdown")
          pak::pkg_install("markdown")
        shell: Rscript {0}

      - uses: r-lib/actions/check-r-package@v2
        with:
          upload-snapshots: true