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Juicer changes chromosome names #346

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jeramiahsmith opened this issue Mar 4, 2024 · 1 comment
Open

Juicer changes chromosome names #346

jeramiahsmith opened this issue Mar 4, 2024 · 1 comment
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@jeramiahsmith
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We are trying to view a juicer .hic file on our UCSC assembly hub, however juicer has modified the names of our reference sequences (capitalized and removed "chr") such hat they are incompatible with the existing reference. Is there a way to fix this or modify the behavior of juicer on the front end?

@sa501428
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sa501428 commented Mar 7, 2024

This issue was fixed a while back; you can find the latest jars here: https://github.com/aidenlab/Juicebox/releases

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