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Too slow to get the inter.hic #354

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YouxinZhao opened this issue Jul 16, 2024 · 1 comment
Open

Too slow to get the inter.hic #354

YouxinZhao opened this issue Jul 16, 2024 · 1 comment

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@YouxinZhao
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I am running the juicer. sh pipeline, but it is too slow to obtain inter.hic. I have spent 20 days and the program is still running. I am not sure if the program is running properly. I have added parallel to the environment variables
@YouxinZhao
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the Genome size is 2.6Gb. The hic data is 400Gb

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@YouxinZhao