trouble running docker GemNotFound Gemfile.lock

[korinagoldsmith]

I've been having trouble running docker for a while now. This is the error I keep getting. I tried manually updating to the current repo using git rebase but I'm still having errors.

2024-09-26 14:31:50 jekyll-1 | error: pathspec 'Gemfile.lock' did not match any file(s) known to git
2024-09-26 20:30:45 jekyll-1 | Resolving dependencies...
2024-09-26 20:30:45 jekyll-1 | /usr/local/bundle/gems/bundler-2.5.20/lib/bundler/definition.rb:599:in `materialize': Could not find jekyll-diagrams-0.10.0, mini_racer-0.6.4, faraday-retry-2.2.1, libv8-node-16.19.0.1-aarch64-linux, faraday-2.12.0, faraday-net_http-3.3.0 in locally installed gems (Bundler::GemNotFound)

I also have a build error. I will insert it below if that helps.

24.58 Gem::Ext::BuildError: ERROR: Failed to build gem native extension.
24.58
24.58 current directory:
24.58 /var/lib/gems/3.2.0/gems/mini_racer-0.16.0/ext/mini_racer_extension
24.58 /usr/bin/ruby3.2 -I/usr/lib/ruby/vendor_ruby extconf.rb
24.58 checking for -lpthread... yes
24.58 checking for whether -Wl,--exclude-libs=ALL is accepted as LDFLAGS... no
24.58 creating Makefile
24.58
24.58 current directory:
24.58 /var/lib/gems/3.2.0/gems/mini_racer-0.16.0/ext/mini_racer_extension
24.58 make DESTDIR= sitearchdir=./.gem.20240926-7-h5zbiw
24.58 sitelibdir=./.gem.20240926-7-h5zbiw clean
24.58
24.58 current directory:
24.58 /var/lib/gems/3.2.0/gems/mini_racer-0.16.0/ext/mini_racer_extension
24.58 make DESTDIR= sitearchdir=./.gem.20240926-7-h5zbiw
24.58 sitelibdir=./.gem.20240926-7-h5zbiw
24.58 compiling mini_racer_extension.cc
24.58 linking shared-object mini_racer_extension.so
24.58 /usr/bin/ld: cannot find
24.58 /var/lib/gems/3.2.0/gems/libv8-node-18.19.0.0-aarch64-linux/vendor/v8/aarch64-linux-gnu/libv8/obj/libv8_monolith.a:
24.58 No such file or directory
24.58 collect2: error: ld returned 1 exit status
24.58 make: *** [Makefile:265: mini_racer_extension.so] Error 1
24.58
24.58 make failed, exit code 2
24.58
24.58 Gem files will remain installed in /var/lib/gems/3.2.0/gems/mini_racer-0.16.0
24.58 for inspection.
24.58 Results logged to
24.58 /var/lib/gems/3.2.0/extensions/aarch64-linux-gnu/3.2.0/mini_racer-0.16.0/gem_make.out
24.58
24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:119:in run' 24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:53:in block in make'
24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:45:in each' 24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:45:in make'
24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/ext_conf_builder.rb:42:in build' 24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:187:in build_extension'
24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:221:in block in 24.58 build_extensions' 24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:218:in each'
24.58 /usr/lib/ruby/vendor_ruby/rubygems/ext/builder.rb:218:in build_extensions' 24.58 /usr/lib/ruby/vendor_ruby/rubygems/installer.rb:844:in build_extensions'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/rubygems_gem_installer.rb:109:in
24.58 build_extensions' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/rubygems_gem_installer.rb:28:in 24.58 install'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/source/rubygems.rb:205:in
24.58 install' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/installer/gem_installer.rb:55:in 24.58 install'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/installer/gem_installer.rb:17:in
24.58 install_from_spec' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/installer/parallel_installer.rb:133:in 24.58 do_install'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/installer/parallel_installer.rb:124:in
24.58 block in worker_pool' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/worker.rb:62:in 24.58 apply_func'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/worker.rb:57:in block in 24.58 process_queue' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/worker.rb:54:in loop'
24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/worker.rb:54:in
24.58 process_queue' 24.58 /var/lib/gems/3.2.0/gems/bundler-2.5.20/lib/bundler/worker.rb:90:in block (2
24.58 levels) in create_threads'
24.58
24.58 An error occurred while installing mini_racer (0.16.0), and Bundler cannot
24.58 continue.
24.58
24.58 In Gemfile:
24.58 mini_racer

Dockerfile:35

33 | WORKDIR /srv/jekyll
34 |
35 | >>> RUN bundle install --no-cache
36 | # && rm -rf /var/lib/gems/3.1.0/cache
37 | EXPOSE 8080

ERROR: failed to solve: process "/bin/sh -c bundle install --no-cache" did not complete successfully: exit code: 5

[TheFermi0n]

I am also having some trouble running docker compose up. I get the following error which is suggesting that the docker image doesn't include those gems or something? Maybe I understood wrong!!

For now, I am back to the legacy method!!

[+] Running 1/0
 ✔ Container thefermi0ngithubio-jekyll-1  Created                                                                                                                                                                 0.0s 
Attaching to jekyll-1
jekyll-1  | /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/definition.rb:596:in `materialize': Could not find jekyll-4.3.3, jekyll-toc-0.18.0, mini_racer-0.12.0, webrick-1.8.1, css_parser-1.17.1, addressable-2.8.6, i18n-1.14.5, rouge-4.2.1, uglifier-4.2.0, nokogiri-1.16.5-aarch64-linux, libv8-node-21.7.2.0-aarch64-linux, public_suffix-5.0.5, concurrent-ruby-1.2.3, sass-embedded-1.77.0-aarch64-linux-gnu, rexml-3.2.8, unicode-display_width-2.5.0, activesupport-7.1.3.2, google-protobuf-4.26.1-aarch64-linux, rb-inotify-0.10.1, strscan-3.1.0, minitest-5.22.3, ffi-1.16.3 in locally installed gems (Bundler::GemNotFound)
jekyll-1  |     from /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/definition.rb:203:in `specs'
jekyll-1  |     from /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/definition.rb:270:in `specs_for'
jekyll-1  |     from /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/runtime.rb:18:in `setup'
jekyll-1  |     from /usr/local/bundle/gems/bundler-2.5.7/lib/bundler.rb:162:in `setup'
jekyll-1  |     from /usr/local/bundle/gems/jekyll-4.3.4/lib/jekyll/plugin_manager.rb:52:in `require_from_bundler'
jekyll-1  |     from /usr/local/bundle/gems/jekyll-4.3.4/exe/jekyll:11:in `<top (required)>'
jekyll-1  |     from /usr/local/bundle/bin/jekyll:25:in `load'
jekyll-1  |     from /usr/local/bundle/bin/jekyll:25:in `<main>'

Details

• macOS: Sequoia 15.0 (24A335)
• docker desktop: 4.34.2 (167172)
• docker compose: version v2.29.2-desktop.2

[george-gca]

@pourmand1376 maybe this have something to do with the entry_point.sh update?

[pourmand1376]

Hey Guys.

I've fixed the bug so that you won't ever see Gemfile.lock git problem. But the problem doesn't solve there.

I found and tested both of your repositories at here. I found out that your docker versions are very different from our built ones (some gem packages are deleted from repo). @korinagoldsmith

For this to solve, we may have to take three solutions:

• You can solve this easily by yourself by using docker compose build and docker compose up. It would built a new docker image for you. You may go ahead from there.
• You may update your repository to the upstream repository so that you would have the same dependencies.
• We should version whenever we change dependencies, so the users would somehow have access to previous versions. I have to think about this more.

To solve @TheFermi0n, I think docker compose build and docker compose up would solve the problem also.

[pourmand1376]

Definitely agree. Releases should be natural not time-based.

[george-gca]

@alshedivat what do you think?

[jaiarora0011]

For me, doing docker compose build and docker compose up solves the problem locally, but I get this error when pushing the Gemfile.lock changes to github:

Downloading rexml-3.3.6 revealed dependencies not in the API or the lockfile
(strscan (>= 0)).
Running `bundle update rexml` should fix the problem.
Error: The process '/opt/hostedtoolcache/Ruby/3.2.2/x64/bin/bundle' failed with exit code 34

[pourmand1376]

You just shouldn't push Gemfile changes to remote.

We have done much in the new version so that people can't push changes of this file to github.

[TheFermi0n]

We have done much in the new version so that people can't push changes of this file to github.

Thank you very much. That would be great. Right now I need to manually revert or deselect the gemlock changes(file).