Bump Flux version to v0.29

[jiayiwang7]

https://github.com/fluxcd/flux2/releases/tag/v0.29.3

What would you like to be added:

• Check if there is any eks-a cli code change required
• Build Flux 0.29 and its controllers version in the https://github.com/aws/eks-anywhere-build-tooling repo

Why is this needed:

Flux updated its merge/apply behavior in the v0.26 release:

fluxcd/kustomize-controller#527

In order to patch Flux resources through any other field manager from now on, patches are not preserved at all by default now.
This behavior is in line with what EKS-A expects (to be as declarative as possible), and in line with any general user who didn’t understand the three-way merge behavior.