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plateHoleInfo.py
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plateHoleInfo.py
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from platefile import resfile, ascfile
from Hole import Hole
import Cassette
import Setup
import os.path
import math
from m2fs.plate.plate import PlateConfigParser
SCALE=14.25
SH_RADIUS=0.1875
ORDERED_FIBER_NAMES=['{}{}-{:02}'.format(color,cnum,fnum)
for color in 'RB'
for cnum in range(1,9)
for fnum in range(1,17)]
class platefile(object):
def __init__(self, filename):
self.filename=filename
def nanfloat(s):
"""Convert string to float or nan if can't"""
try:
return float(s)
except Exception:
return float('nan')
def std_offset(c1,c2):
"""c1 sh, c2 std"""
c1=(tuple([float(x) for x in c1[0].split()]),
tuple([float(x) for x in c1[1].split()]))
c2=(tuple([float(x) for x in c2[0].split()]),
tuple([float(x) for x in c2[1].split()]))
ra1=(c1[0][0]+c1[0][1]/60.0+c1[0][2]/3600.0)*15.0
de1=c1[1][0]
if de1<0:
de1-=c1[1][1]/60.0+c1[1][2]/3600.0
else:
de1+=c1[1][1]/60.0+c1[1][2]/3600.0
ra2=(c2[0][0]+c2[0][1]/60.0+c2[0][2]/3600.0)*15.0
de2=c2[1][0]
if de2<0:
de2-=c2[1][1]/60.0+c2[1][2]/3600.0
else:
de2+=c2[1][1]/60.0+c2[1][2]/3600.0
ra1*=math.pi/180.0
de1*=math.pi/180.0
ra2*=math.pi/180.0
de2*=math.pi/180.0
seps=math.acos(math.sin(de1)*math.sin(de2) +
math.cos(de1)*math.cos(de2)*math.cos(ra2-ra1) )
return str(round(seps*180*3600/math.pi,2))
def _setup_nfo_to_dict(setup_nfo_list):
nfo=setup_nfo_list
#nfo 4 lines with endings
#first from ascfile
words=nfo[0].split()
ha=words[4]
st=words[5]
airm=words[8]
az=words[12]
el=words[11]
#last 3 from resfile
words=nfo[1].split()
ra=' '.join(words[0:3])
de=' '.join(words[3:6])
ep=words[6]
import datetime
words=nfo[3].split()
setup_time_utc=datetime.datetime(int(words[5]), int(words[4]),
int(words[3]), int(words[0]),
int(words[1]), int(words[2]))
return {'RA':ra,'DE':de,'EPOCH':ep,'UTC':setup_time_utc,
'EL':el,'AZ':az,'AIRMASS':airm,'SIDEREAL_TIME':st,
'OBSERVATORY':'LCO/Magellan',
'TELESCOPE':'Clay'}
class plateHoleInfo(object):
"""
Frontend to the .res & .asc files of a setup
used to retrieve information about a given hole
"""
def __init__(self,file):
self.setups={}
self.cassettes={}
self.cassette_groups={}
self.holeSet=set()
self.sh_hole=None#'hole'
self.standard={'hole':None,'offset':0.0}
self.mechanical_holes=[]
if 'Sum.asc' in file:
self.name=os.path.basename(file)[0:-4]
self.rfile=resfile(file.replace('Sum.asc','plate.res'))
self.afile=ascfile(file)
self.pfile_filename=file.replace('_Sum.asc','.plate')
self._init_fromASC()
if 'HotJupiters_1' in self.name:
_postProcessHJSetups(self)
if 'Calvet' in self.name:
_postProcessCalvetSetups(self)
if 'Carnegie' in self.name:
_postProcessCarnegieSetups(self)
if 'Kounkel_2' in self.name:
_postProcessKounkel2Setups(self)
#set of cassettes with same color & slit in future this
# will come from plate file
#h & l are used to divide the physical cassettes into a high-numbered
#fiber logical cassette and a low-numbered liber logical cassette
#for a given cassette h & l had better be created with the same slit
# assignemnts!
self.cassettes={s:Cassette.new_cassette_dict() for s in self.setups}
self.cassette_groups={s:[Cassette.blue_cassette_names(),
Cassette.red_cassette_names()]
for s in self.setups}
if 'Carnegie_1' in self.name:
_postProcessIanCassettes(self)
if 'HotJupiters_1' in self.name:
_postProcessHJCassettes(self)
# if 'Calvet' in self.name:
# _postProcessCalvetCassettes(self)
if 'Outer_LMC_1' in self.name:
_postProcessNideverCassettes(self)
if 'Vasily' in self.name:
_postProcessVasilyCassettes(self)
if 'Kounkel_2' in self.name:
_postProcessKounkel2Cassettes(self)
if 'Calvet' in self.name:
# this doesn't work because hole.reset() copiest over the restriction to 'ASSIGNMENT' and the isAssigned() test just assumes the cassette is assigned if it is a string.'
# for h in self.setups['Setup 1']['holes']:
# h['INIT_ASSIGNMENT']['CASSETTE']='R'
# for h in self.setups['Setup 2']['holes']:
# h['INIT_ASSIGNMENT']['CASSETTE']='B'
_OddsOnly(self, 'Setup 1')
_OddsOnly(self, 'Setup 2')
_OddsOnly(self, 'Setup 3')
_OddsOnly(self, 'Setup 4')
_OddsOnly(self, 'Setup 5')
_OddsOnly(self, 'Setup 6')
_OddsOnly(self, 'Setup 7')
_OddsOnly(self, 'Setup 8')
_ROnly(self, 'Setup 1')
_BOnly(self, 'Setup 2')
_ROnly(self, 'Setup 3')
_BOnly(self, 'Setup 4')
_ROnly(self, 'Setup 5')
_BOnly(self, 'Setup 6')
_ROnly(self, 'Setup 8')
if 'Aarnio' in self.name:
_OddsOnly(self, 'Setup 1')
_OddsOnly(self, 'Setup 2')
_SetDeadFibers(self)
for s in self.setups:
self.setups[s]['cassetteConfig']=self.cassettes_for_setup(s)
else:
self.name=os.path.basename(file)[0:-6]
self.pfile_filename=file
self._init_from_plate(file)
def _init_fromASC(self):
#add shack hartman holes
#Add the SH to the global set
self.sh_hole=Hole(0.0, 0.0, 0.0, SH_RADIUS/SCALE, type='C')
self.holeSet.add(self.sh_hole)
#add standard to plate
awords=self.afile.seventeen.split()
rwords=self.rfile.seventeen.split()
std_ra=' '.join(rwords[1:4])
std_de=' '.join(rwords[4:7])
std_hole=Hole(float(awords[0])/SCALE, float(awords[1])/SCALE,
float(awords[2])/SCALE, float(awords[3])/SCALE,
type=awords[4], mattfib='R-01-17',
idstr=self.afile.seventeen)
self.holeSet.add(std_hole)
self.standard['hole']=std_hole
#add fiducial & thumbscrew holes
for l in self.afile.fid_thumb_lines:
awords=l.split()
h=Hole(float(awords[0])/SCALE,
float(awords[1])/SCALE,
float(awords[2])/SCALE,
float(awords[3])/SCALE,
type=awords[4])
self.mechanical_holes.append(h)
self.holeSet.add(h)
#Go through all the setups in the files
for setup_name, setup_dict in self.rfile.setups.items():
#make sure setup is in both
if setup_name not in self.afile.setups.keys():
raise ValueError('Setup must be in both res & asc files')
#create a setup
self.setups[setup_name]=Setup.new_setup(platename=self.name,
setup_name=setup_name)
targets=[]
other=[]
#Merge all the hole data in res & asc
for i, rline in enumerate(setup_dict['setup_lines']):
aline=self.afile.getLineNofSetup(i, setup_name)
awords=aline.split()
atype=awords[4]
rwords=rline.split()
rtype=rwords[8]
#Verify that the asc & res files agree
if rtype!=atype:
raise LookupError('Hole types different in .res & .asc')
if rwords[0] !=awords[5]:
raise LookupError('old fiber assignments differ in .res & .asc')
#Grab Matt's fiber assignment
matt_fiber=rwords[0]
#Perform a crappy extraction of additional hole information
addit={}
if rtype =='O' and len(rwords) > 9:
addit=parse_extra_data(self.name, setup_name, rwords[9:])
#Instantiate a hole
hole=Hole(float(awords[0])/SCALE,
float(awords[1])/SCALE,
float(awords[2])/SCALE,
float(awords[3])/SCALE,
ra=tuple([x for x in rwords[1:4]]),
de=tuple([x for x in rwords[4:7]]),
ep=float(rwords[7]),
setup=setup_name,
type=rtype,
mattfib=matt_fiber,
idstr=aline,
**addit)
#Enforce holes exist only once
if hole in self.holeSet:
print "Duplicate hole: {}".format(hole)
for h in self.holeSet:
if h.hash==hole.hash:
hole=h
break
else:
self.holeSet.add(hole)
#Don't add fiber 17 to any setup
if matt_fiber[-3:-1]=='17':
continue
#gather the holes
if rtype in ('O', 'S'):
targets.append(hole)
else:
other.append(hole)
#other holes go into unused, bit of a misnomer
self.setups[setup_name]['unused_holes']=other
#Put science holes into a channel
self.setups[setup_name]['holes']=targets
setupNfo=self.afile.setups[setup_name]['setup_nfo_str']
setupNfo.extend(self.rfile.setups[setup_name]['setup_nfo_str'])
self.setups[setup_name]['INFO']=_setup_nfo_to_dict(setupNfo)
if setup_name=='Setup 1':
#compute the offset to the stadard star
self.standard['offset']=std_offset(
(self.setups[setup_name]['INFO']['RA'],
self.setups[setup_name]['INFO']['DE']),
(std_ra,std_de))
self.setups[setup_name]['INFO']['NAME']=setup_name
def _init_from_plate(self, file):
def plateDict_2_Hole(d):
addit=d.copy()
try:
return Hole(float(addit.pop('x'))/SCALE,
float(addit.pop('y'))/SCALE,
float(addit.pop('z'))/SCALE,
float(addit.pop('r'))/SCALE,
**addit)
except ValueError:
return None
plate=Plate(file)
#Add the SH to the global set
self.sh_hole=plateDict_2_Hole(plate.shackhartman)
self.holeSet.add(self.sh_hole)
#Add standard to plate
std_hole=plateDict_2_Hole(plate.standard)
self.holeSet.add(std_hole)
self.standard={'hole':std_hole, 'offset':plate.standard_offset}
#add fiducial & thumbscrew holes
self.mechanical_holes=[plateDict_2_Hole(d) for d in plate.mechanical]
self.holeSet.update(self.mechanical_holes)
#Go through all the setups in the files
for setup_name, setup in plate.setups.iteritems():
targets=[]
other=[]
for t in setup._target_list:
t['setup']=setup_name
hole=plateDict_2_Hole(t)
if not hole:
#fiber mightnot be plugged
continue
#Enforce holes exist only once
if hole in self.holeSet:
print "Duplicate hole: {}".format(hole)
for h in self.holeSet:
if h.hash==hole.hash:
hole=h
break
else:
self.holeSet.add(hole)
targets.append(hole)
for t in setup._guide_list:
hole=plateDict_2_Hole(t)
#Enforce holes exist only once
if hole in self.holeSet:
print "Duplicate hole: {}".format(hole)
for h in self.holeSet:
if h.hash==hole.hash:
hole=h
break
else:
self.holeSet.add(hole)
other.append(hole)
if targets:
#create a setup
self.setups[setup_name]=Setup.new_setup(platename=self.name,
setup_name=setup_name)
#other holes go into unused, bit of a misnomer
self.setups[setup_name]['unused_holes']=other
#Put science holes into a channel
self.setups[setup_name]['holes']=targets
self.setups[setup_name]['INFO']=setup.attrib.copy()
self.cassettes[setup_name]=Cassette.new_cassette_dict()
for h in targets:
if h['FIBER']:
cname=h['ASSIGNMENT']['CASSETTE']
fnum=h['ASSIGNMENT']['FIBERNO']
self.cassettes[setup_name][cname].map[fnum]=h
self.cassettes[setup_name][cname].holes.append(h)
self.cassettes[setup_name][cname].used+=1
self.setups[setup_name]['cassetteConfig']=self.cassettes[setup_name]
self.cassette_groups[setup_name]=[Cassette.blue_cassette_names(),
Cassette.red_cassette_names()]
self.plate=plate
def cassettes_for_setup(self,setup_name):
import copy
ret=copy.deepcopy(self.cassettes[setup_name])
if not ret:
import ipd;ipd.set_trace()
return ret
def cassette_groups_for_setup(self, setup_name):
return self.cassette_groups[setup_name]
def write_platefile(self):
plate_holes=[]
for h in self.mechanical_holes+[self.sh_hole,self.standard['hole']]:
rec={}
rec['x']='{:.4f}'.format(h.x*SCALE)
rec['y']='{:.4f}'.format(h.y*SCALE)
rec['z']='{:.4f}'.format(h.z*SCALE)
rec['r']='{:.4f}'.format(h.radius*SCALE)
rec['type']=h['TYPE']
rec['id']=h['ID']
rec.update({str.lower(k):str(v) for k,v in h['CUSTOM'].items()})
plate_holes.append(rec)
pfile_data={'plate':{'name':self.name,
'offset':str(self.standard['offset'])},
'plateholes':plate_holes}
for s in self.setups:
setup=self.setups[s]
#Grab targets
used_holes=[]
for fiber in ORDERED_FIBER_NAMES:
rec={}
rec['fiber']=fiber
#get cassette
c=setup['cassetteConfig'][Cassette.fiber2cassettename(fiber)]
#get the hole
h=c.get_hole(fiber)
#determine if in this setup
if h and h in setup['holes']:
rec['ra']=h.ra_string()
rec['de']=h.de_string()
rec['ep']=str(h['EPOCH'])
rec['x']='{:.4f}'.format(h.x*SCALE)
rec['y']='{:.4f}'.format(h.y*SCALE)
rec['z']='{:.4f}'.format(h.z*SCALE)
rec['r']='{:.4f}'.format(h.radius*SCALE)
rec['type']=h['TYPE']
rec['priority']=str(h['PRIORITY'])
rec['id']=h['ID']
rec['slit']=str(h['SLIT'])
rec.update({str.lower(k):str(v) for k,v in h['CUSTOM'].items()})
else:
if h:
rec['id']='unassigned'
rec['type']='U'
else:
rec['id']='inactive'
rec['type']='I'
used_holes.append(rec)
#Grab guides
guide_holes=[]
ga=(h for h in setup['unused_holes'] if h['TYPE'] in ['G','A'])
for h in ga:
rec={}
rec['ra']=h.ra_string()
rec['de']=h.de_string()
rec['ep']=str(h['EPOCH'])
rec['x']='{:.4f}'.format(h.x*SCALE)
rec['y']='{:.4f}'.format(h.y*SCALE)
rec['z']='{:.4f}'.format(h.z*SCALE)
rec['r']='{:.4f}'.format(h.radius*SCALE)
rec['type']=h['TYPE']
rec.update({str.lower(k):str(v) for k,v in h['CUSTOM'].items()})
guide_holes.append(rec)
#Write out unassignable & undrillable target
pfile_data[s]={ 'info':setup['INFO'].copy(),
'Targets':used_holes,
'Guide':guide_holes,
'Unused':[]} #TODO in the future
pfile=PlateConfigParser( self.pfile_filename,sections=pfile_data)
pfile.write()
def _postProcessHJSetups(plateinfo):
"""
Take the 2 setups for Nov13 Bailey plate and break them into the
6 real setups
"""
setups=plateinfo.setups
#need to create three setups from each setup
#1 is calibration
#2 is lores (all science targets)
#3 is hires primary field
#4-6 is same, but for original setup 2
new_setups={}
holes=setups['Setup 1']['holes']
#telluric calibrator target pool
tpool=[h for h in holes if h.get('subclass','')=='Telluric']
#hires targets
ppool=[h for h in holes if h.get('subclass','')=='']
#lo res target pool
lpool=[h for h in holes if h.get('subclass','')=='Extra']
import copy
for k in ['Setup 1','Setup 2','Setup 3']:
new_setups[k]=copy.copy(setups['Setup 1'])
new_setups[k]['setup']=k
new_setups['Setup 1']['holes']=tpool
new_setups['Setup 2']['holes']=lpool
new_setups['Setup 3']['holes']=ppool
holes=setups['Setup 2']['holes']
#telluric calibrator target pool
tpool=[h for h in holes if h.get('subclass','')=='Telluric']
#hires targets
ppool=[h for h in holes if h.get('subclass','')=='']
#lo res target pool
lpool=[h for h in holes if h.get('subclass','')=='Extra']
for k in ['Setup 4','Setup 5','Setup 6']:
new_setups[k]=copy.copy(setups['Setup 2'])
new_setups[k]['setup']=k
new_setups['Setup 4']['holes']=tpool
new_setups['Setup 5']['holes']=lpool
new_setups['Setup 6']['holes']=ppool
#update the setups
plateinfo.setups=new_setups
def _postProcessCalvetSetups(plateinfo):
"""
Drop excess targets
"""
s=plateinfo.setups['Setup 7']
ob=[h for h in s['holes'] if h.isObject()]
sk=[h for h in s['holes'] if h.isSky()]
if sk:
ratio=float(len(ob))/len(sk)
pct_keep=float(123)/(len(ob)+len(sk))
from math import floor
no=int(floor(pct_keep*len(ob)))
ns=int(floor(pct_keep*len(sk)))
else:
ns=0
no=123
ob.sort(key=lambda h: h['PRIORITY'])
sk.sort(key=lambda h: h['PRIORITY'])
s['holes']=ob[0:no]+sk[0:ns]
def _postProcessCarnegieSetups(plateinfo):
"""
Drop excess targets
"""
droptarg=[('06 49 4.92','-36 00 29.3'),
('06 49 3.13','-35 59 42.2'),
('06 49 6.67','-36 00 13.1'),
('06 49 17.74','-35 57 5.2'),
('06 49 11.16','-35 55 58.2'),
('06 49 22.03','-36 02 0.6'),
('06 49 3.09','-35 55 22.6'),
('06 48 56.65','-35 57 50.3'),
('06 49 3.09','-36 05 13.4'),
('06 48 54.51','-36 05 13.4'),
('06 48 46.44','-35 55 58.2'),
('06 48 39.86','-35 57 5.2'),
('06 48 34.08','-36 00 18.0'),
('06 48 46.44','-36 04 37.8'),
('06 48 35.57','-35 58 35.4')]
def in_to_drop(hole):
return (' '.join(h['RA']),' '.join(h['DEC'])) in droptarg
s=plateinfo.setups['Setup 2']
s['holes']=[h for h in s['holes'] if not in_to_drop(h)]
def _postProcessKounkel2Setups(plateinfo):
"""
Drop excess targets
"""
h=plateinfo.setups['Setup 2']['holes']
h.sort(key=lambda h: h['PRIORITY'],reverse=True)
plateinfo.setups['Setup 2']['holes']=h[0:128]
def _postProcessIanCassettes(plateinfo):
"""
Take the 2 setups for Nov13 Bailey plate and break them into the
6 real setups
"""
for c in plateinfo.cassettes['Setup 2'].values():
if 'l' in c.name:
if 'R8' in c.name:
c.usable=[1]
else:
c.usable=[1,8]
else:
if 'R8' in c.name:
c.usable=[9,16]
else:
c.usable=[15]
def _postProcessHJCassettes(plateinfo):
for s in ['Setup 3','Setup 6']:
for c in plateinfo.cassettes[s].values():
if 'l' in c.name:
c.usable=[2,4,6,8]
else:
c.usable=[10,12,14,16]
for c in plateinfo.cassettes['Setup 4'].values():
if 'l' in c.name:
c.usable=[2]
else:
c.usable=[16]
for c in plateinfo.cassettes['Setup 1'].values():
#have 8 want in fiber 8 of every other tetris
if c.name[1] in ['1','3','5','7']:
if 'l' in c.name:
c.usable=[8]
else:
c.usable=[]
else:
c.usable=[]
for s in ['Setup 2','Setup 5']:
for c in plateinfo.cassettes[s].values():
if 'l' in c.name:
c.usable=range(1,8,2)
else:
c.usable=range(9,16,2)
def _postProcessCalvetCassettes(plateinfo):
for c_set in plateinfo.cassettes.values():
for c in c_set.values():
if 'l' in c.name:
c.usable=[2,4,6,8]
else:
c.usable=[10,12,14,16]
def _postProcessVasilyCassettes(plateinfo):
#Setups 1, 2, 3, 4
ok=['B1','R1','B5','R5','B2','R2','B6','R6']
for c in plateinfo.cassettes['Setup 1'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 1']=[[i+k for i in ok for k in 'lh']]
ok=['B3','R3','B7','R7','B4','R4','B8','R8']
for c in plateinfo.cassettes['Setup 2'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 2']=[[i+k for i in ok for k in 'lh']]
def _postProcessKounkel2Cassettes(plateinfo):
cnames=Cassette.new_cassette_dict().keys()
ok3=['B1h','R3h','B5h','R7h']
ok5=['R2l','R6h','R6l']
filtered_left=[c for c in Cassette.left_only(cnames) if c not in ok5]
filtered_right=[c for c in Cassette.right_only(cnames) if c not in ok3]
ok3+=filtered_left
ok5+=filtered_right
#Setups 3
ok=ok3
for c in plateinfo.cassettes['Setup 3'].values():
if c.name in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 3']=[ok]
#Setup 5
ok=ok5
for c in plateinfo.cassettes['Setup 5'].values():
if c.name in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 5']=[ok]
#Setup 1
ok=['R'+str(i)+lh for i in range(1,9) for lh in 'lh']
for c in plateinfo.cassettes['Setup 1'].values():
if c.name in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 1']=[ok]
#Setup 1
ok=['B'+str(i)+lh for i in range(1,9) for lh in 'lh']
for c in plateinfo.cassettes['Setup 2'].values():
if c.name in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 2']=[ok]
def _postProcessNideverCassettes(plateinfo):
#Setups 1, 2, 3, 4
ok=['B1','B5','B2','B6']
for c in plateinfo.cassettes['Setup 1'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 1']=[[i+k for i in ok for k in 'lh']]
ok=['R1','R5','R2','R6']
for c in plateinfo.cassettes['Setup 2'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 2']=[[i+k for i in ok for k in 'lh']]
ok=['B3','B7','B4','B8']
for c in plateinfo.cassettes['Setup 3'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 3']=[[i+k for i in ok for k in 'lh']]
ok=['R3','R7','R4','R8']
for c in plateinfo.cassettes['Setup 4'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 4']=[[i+k for i in ok for k in 'lh']]
#Setups 5, 6, 7, 8
ok=['B1','B5','B2','B6']
for c in plateinfo.cassettes['Setup 5'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 5']=[[i+k for i in ok for k in 'lh']]
ok=['R1','R5','R2','R6']
for c in plateinfo.cassettes['Setup 6'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 6']=[[i+k for i in ok for k in 'lh']]
ok=['B3','B7','B4','B8']
for c in plateinfo.cassettes['Setup 7'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 7']=[[i+k for i in ok for k in 'lh']]
ok=['R3','R7','R4','R8']
for c in plateinfo.cassettes['Setup 8'].values():
if c.name[0:2] in ok:
if 'l' in c.name:
c.usable=range(1,9)
else:
c.usable=range(9,17)
else:
c.usable=[]
plateinfo.cassette_groups['Setup 8']=[[i+k for i in ok for k in 'lh']]
def parse_extra_data(name,setup, words):
if name=='Calvet_sum':
if words[0].lower()=='f':
return {'PRIORITY':float(words[1][:-1])}
else:
return {'PRIORITY':float(0.0)}
ret={}
#import pdb;pdb.set_trace()
#Carnegie
if name=='Carnegie_1_Sum':
if setup=='Setup 1':
x,y,z=words[0].split('_')
ret['foo']=x
ret['bar']=y
ret['baa']=z
if setup=='Setup 2':
keys=['ID','V','V-I','d']
fields=words[0].split('_')
for i,x in enumerate(fields):
field=x.split('=')
if len(field)>1:
ret[keys[i]]=field[1]
if 'V-I' in ret:
ret['COLOR']=nanfloat(ret['V-I'])
if 'V' in ret:
ret['MAGNITUDE']=nanfloat(ret['V'])
if setup=='Setup 3':
ret['ID']=words[0]
#Nuria 1
if name=='Calvet_1_Sum':
if setup in ['Setup 1','Setup 2','Setup 6']:
id,mag=words[0].split('_')
else:
id1,id2,mag=words[0].split('_')
id=id1+'_'+id2
ret['ID']=id
ret['V?']=mag
ret['MAGNITUDE']=nanfloat(mag)
#Nuria 1
if name=='Calvet_2_Sum':
if setup in ['Setup 1','Setup 2','Setup 3','Setup 4','Setup 5']:
id,mag=words[0].split('_')
else:
id1,id2,mag=words[0].split('_')
id=id1+'_'+id2
ret['ID']=id
ret['V?']=mag
ret['MAGNITUDE']=nanfloat(mag)
#Kounkel 2
if name=='Kounkel_2_Sum':
ret['V?']=words[0]
#Jeb
if name=='HotJupiters_1_Sum':
l=words[0].split('_')
ret['ID']=l[0]
ret['V']=l[1]
ret['MAGNITUDE']=nanfloat(l[1])
if len(l)>2:
ret['subclass']=l[2]
#Fornax_1
if name=='Fornax_1_Sum':
l=words[0].split('=')
ret['V']=l[1]
ret['MAGNITUDE']=nanfloat(l[1])
#David
if name=='Outer_LMC_1_Sum':
ret['ID']=words[0]
#Carina_1
if name=='VasilyStream_1_Sum':
l=words[0].split('_')
ret['i']=l[3]
ret['g']=l[2]
ret['MAGNITUDE']=nanfloat(l[2])
return ret
def _OddsOnly(plateinfo, setup):
for c in plateinfo.cassettes[setup].itervalues():
if 'l' in c.name:
c.usable=[1,3,5,7]
else:
c.usable=[9,11,13,15]
def _ROnly(plateinfo, setup):
for c in plateinfo.cassettes[setup].itervalues():
if 'B' in c.name:
c.usable=[]
plateinfo.cassette_groups[setup]=[Cassette.red_cassette_names()]
def _BOnly(plateinfo, setup):
for c in plateinfo.cassettes[setup].itervalues():
if 'R' in c.name:
c.usable=[]
plateinfo.cassette_groups[setup]=[Cassette.blue_cassette_names()]
def _SetDeadFibers(plateinfo):
dead=( ('R1l',(2,)),
('R8h',(9,)),
('R2h',(9,)),
('R7h',(11, 12)),
('B4l',(5,)),
('B4h',(15,)),
('B6l',(2,4)))
# b8-3, 6-13,5-7,4-4 treat as ok
# r8-3, 8-8, treat as ok
for cassettes in plateinfo.cassettes.itervalues():
for cname, fnums in dead:
for fnum in fnums:
try:
cassettes[cname].usable.remove(fnum)
except Exception:
pass