diff --git a/.github/workflows/django.yml b/.github/workflows/django.yml
index de20631c..0fcd1558 100644
--- a/.github/workflows/django.yml
+++ b/.github/workflows/django.yml
@@ -24,9 +24,7 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install -r requirements.txt
-    - name: Create .secret file
-      run: |
-        echo "${{ secrets.PORTAL_USERDB_SECRET }}" > server/.secret
+
     - name: Run Tests
       run: |
         python3.9 manage.py test
diff --git a/Dockerfile b/Dockerfile
index cb994a0c..5574addf 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -6,10 +6,6 @@ LABEL org.opencontainers.image.source=https://github.com/octocat/my-repo
 LABEL org.opencontainers.image.description="My container image"
 LABEL org.opencontainers.image.licenses=MIT
 
-# Note that this is just for debug / test purposes; should not be set via the setup for production
-# ENV DJANGO_SUPERUSER_PASSWORD="BioCompute123"
-# ENV DJANGO_SUPERUSER_USERNAME="BioComputeSuperUser"
-# ENV DJANGO_SUPERUSER_EMAIL="BioComputeSuperUser@gwu.edu"
 
 RUN apt-get -qq update && apt-get install -y python3.9 python3-dev python3-pip
 
@@ -17,18 +13,15 @@ RUN python3 -m pip install --upgrade pip
 
 WORKDIR /biocompute_api
 
-COPY requirements.txt .
-
+COPY requirements.txt /biocompute_api/
 RUN python3 -m pip install -r requirements.txt
 
-COPY . ./
-
-WORKDIR /biocompute_api/
+COPY . /biocompute_api/
 
-# RUN python3 manage.py migrate
-# RUN python3 manage.py createsuperuser --no-input
+WORKDIR /biocompute_api
 
 EXPOSE 8000
-#CMD ["bash"]
-ENTRYPOINT ["python3", "manage.py", "runserver"]
-CMD ["0.0.0.0:8000"]
\ No newline at end of file
+
+ENTRYPOINT ["./entrypoint.sh"]
+
+CMD ["python3", "manage.py", "runserver", "0.0.0.0:8000"]
diff --git a/biocompute/apis.py b/biocompute/apis.py
index 8b66fc21..58f93f74 100644
--- a/biocompute/apis.py
+++ b/biocompute/apis.py
@@ -244,7 +244,6 @@ def post(self, request) -> Response:
                 data=bco_results
             )
 
-        import pdb; pdb.set_trace()
         return Response(status=status.HTTP_200_OK, data=response_data)
     
         # for index, object in enumerate(data):
@@ -307,7 +306,6 @@ def post(self, request) -> Response:
         #         continue
 
         #     bco_results = validator.parse_and_validate(bco_instance.contents)
-        #     import pdb; pdb.set_trace()
         #     identifier, results = bco_results.popitem()
 
         #     if results["number_of_errors"] > 0:
@@ -499,7 +497,7 @@ def post(self, request) -> Response:
                 message=message,
                 data=results
             ))
-
+        
         status_code = response_status(accepted_requests, rejected_requests)
         return Response(status=status_code, data=response_data)
 
diff --git a/biocompute/models.py b/biocompute/models.py
index 274b81be..bc2a7014 100644
--- a/biocompute/models.py
+++ b/biocompute/models.py
@@ -19,7 +19,7 @@
 ]
 
 class Bco(models.Model):
-    """BioComput Object Model.
+    """BioCompute Object Model.
 
     Attributes:
     -----------
diff --git a/biocompute/services.py b/biocompute/services.py
index 95cb4159..01192e75 100644
--- a/biocompute/services.py
+++ b/biocompute/services.py
@@ -50,12 +50,25 @@ def load_schema(schema_uri):
         Returns:
         - dict: The loaded JSON schema.
         """
+        schema_mapping = {
+            "https://w3id.org/ieee/ieee-2791-schema/2791object.json": f"{BASE_DIR}/config/schemas/2791/2791object.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.1.0/dataset/dataset_extension.json": f"{BASE_DIR}/config/schemas/1.1.0/dataset_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.1.0/fhir/fhir_extension.json": f"{BASE_DIR}/config/schemas/1.1.0/fhir_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.1.0/galaxy/galaxy_extension.json": f"{BASE_DIR}/config/schemas/1.1.0/galaxy_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.1.0/license/license_extension.json": f"{BASE_DIR}/config/schemas/1.1.0/license_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.1.0/scm/scm_extension.json": f"{BASE_DIR}/config/schemas/1.1.0/scm_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.2.0/dataset/dataset_extension.json": f"{BASE_DIR}/config/schemas/1.2.0/dataset_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.2.0/fhir/fhir_extension.json": f"{BASE_DIR}/config/schemas/1.2.0/fhir_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.2.0/galaxy/galaxy_extension.json": f"{BASE_DIR}/config/schemas/1.2.0/galaxy_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.2.0/license/license_extension.json": f"{BASE_DIR}/config/schemas/1.2.0/license_extension.json",
+            "https://raw.githubusercontent.com/biocompute-objects/extension_domain/1.2.0/scm/scm_extension.json": f"{BASE_DIR}/config/schemas/1.2.0/scm_extension.json"
+        }
 
-        if schema_uri == \
-          "https://w3id.org/ieee/ieee-2791-schema/2791object.json":
-            return jsonref.load_uri(
-                f"file://{BASE_DIR}/config/IEEE/2791object.json"
-            )
+        if schema_uri in schema_mapping:
+            print(schema_uri in schema_mapping, schema_uri)
+            return jsonref.load_uri(f"file://{schema_mapping[schema_uri]}")
+        else:
+            print(schema_uri in schema_mapping, schema_uri)
         try:
             return jsonref.load_uri(schema_uri)
         except (JSONDecodeError, TypeError, RequestsConnectionError) as e:
diff --git a/config/schemas/1.1.0/dataset_extension.json b/config/schemas/1.1.0/dataset_extension.json
new file mode 100644
index 00000000..00ad6677
--- /dev/null
+++ b/config/schemas/1.1.0/dataset_extension.json
@@ -0,0 +1,86 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/dataset/dataset_extension.json",
+    "title": "dataset_extension",
+    "type": "object",
+    "description": "The external references extension to list additional licenses and dataset catagories for a dataset BCO (dsBCO).",
+    "required": ["dataset_extension", "extension_schema"],
+    "additionalProperties": false,
+    "properties": {
+        "dataset_extension": {
+            "type": "object",
+            "additionalProperties": false,
+            "required": ["dataset_categories"],
+            "properties": {
+                "additional_license": {
+                    "type": "object",
+                    "description": "The additional license property contains the details about the licenses applied to the dataset and the script or tool/software used to process the given dataset.",
+                    "additionalProperties": false,
+                    "properties": {
+                        "data_license": {
+                            "title": "data_license",
+                            "type": "string",
+                            "description": "The license applied to the data or the dataset by the author",
+                            "examples": [
+                                "https://creativecommons.org/licenses/by/4.0/"
+                            ]
+                        },
+                        "script_license": {
+                            "title": "script_license",
+                            "type": "string",
+                            "description": "The license applied to the computational script or the tool/software developed to process (parse, QC, align) the input dataset for a final output dataset.",
+                            "examples": [
+                                "https://www.gnu.org/licenses/gpl-3.0.en.html"
+                            ]
+                        }
+                    }
+                },
+                "dataset_categories": {
+                    "title": "dataset_categories",
+                    "type": "array",
+                    "description": "Dataset categories describe and provide more information about the dataset which can be used to classify, group, sort and filter datasets.",
+                    "items": {
+                        "required": [
+                            "category_value",
+                            "category_name"
+                        ],
+                        "additionalProperties": false,
+                        "properties": {
+                            "category_value": {
+                                "type": "string",
+                                "title": "category_value",
+                                "description": "An explanation about the purpose of this instance.",
+                                "examples": [
+                                    "Homo sapiens"
+                                ]
+                            },
+                            "category_name": {
+                                "type": "string",
+                                "title": "category_name",
+                                "description": "An explanation about the purpose of this instance.",
+                                "enum": [
+                                    "species",
+                                    "molecule",
+                                    "tag",
+                                    "file_type",
+                                    "status",
+                                    "scope"
+                                ]
+                            }
+                        }
+                    }
+                }
+            }
+        },
+		"extension_schema": {
+            "title": "extension_schema",
+            "type": "string",
+			"format": "uri",
+            "description": "The schema applied to the extension object",
+            "examples": [
+                "http://www.w3id.org/biocompute/extension_domain/example.json"
+            ]
+			
+		}
+    }
+}
diff --git a/config/schemas/1.1.0/fhir_extension.json b/config/schemas/1.1.0/fhir_extension.json
new file mode 100644
index 00000000..383169ed
--- /dev/null
+++ b/config/schemas/1.1.0/fhir_extension.json
@@ -0,0 +1,67 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "https://w3id.org/biocompute/extension_domain/1.1.0/fhir/fhir_extension.json",
+    "title": "fhir_extension",
+    "type": "object",
+    "description": "The external references extension to FHIR resource",
+    "required": ["fhir_extension", "extension_schema"],
+    "additionalProperties": false,
+    "properties":{
+        "extension_schema": {
+            "title": "extension_schema",
+            "type": "string",
+            "format": "uri",
+            "description": "The schema applied to the extension object",
+            "examples": [
+                "http://www.w3id.org/biocompute/extension_domain/example.json"
+            ]
+            
+        },
+        "fhir_extension":{
+            "title": "",
+            "type": "array",
+            "decription": "",
+            "items": {
+                "required": [
+                    "fhir_endpoint",
+                    "fhir_version",
+                    "fhir_resources"
+                ],
+                "properties": {
+                    "fhir_endpoint": {
+                        "type": "string",
+                        "description": "Base URI of FHIR server where the resources are stored",
+                        "examples": [
+                            "http://fhirtest.uhn.ca/baseDstu3"
+                        ],
+                        "format": "uri"
+                    },
+                    "fhir_version": {
+                        "type": "string",
+                        "description": "FHIR version of the server endpoint"
+                    },
+                    "fhir_resources": {
+                        "type": "array",
+                        "items": {
+                            "type": "object",
+                            "required": [
+                                "fhir_resource",
+                                "fhir_id"
+                            ],
+                            "properties": {
+                                "fhir_resource": {
+                                    "type": "string",
+                                    "description": "Type of FHIR resource used"
+                                },
+                                "fhir_id": {
+                                    "type": "string",
+                                    "description": "Server-specific identifier string"
+                                }
+                            }
+                        }
+                    }
+                }
+            }
+        }
+    }
+}
diff --git a/config/schemas/1.1.0/galaxy_extension.json b/config/schemas/1.1.0/galaxy_extension.json
new file mode 100644
index 00000000..eb59a870
--- /dev/null
+++ b/config/schemas/1.1.0/galaxy_extension.json
@@ -0,0 +1,44 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/galaxy/galaxy_extension.json",
+    "title": "galaxy_extension",
+    "type": "object",
+    "description": "The external references **example** extension for a Galaxy BCO.",
+    "required": ["galaxy_extension", "extension_schema"],
+    "additionalProperties": false,
+    "properties": {
+        "extension_schema": {
+            "type": "string",
+            "format": "uri",
+            "description": "The schema applied to the extension object",
+            "examples": [
+                "http://www.w3id.org/biocompute/extension_domain/example.json"
+            ]
+            
+        },
+        "galaxy_extension": {
+            "type": "object",
+            "required": [
+                "galaxy_url",
+                "galaxy_version"
+            ],
+            "properties": {
+                "galaxy_url": {
+                    "type": "string",
+                    "description": "The base url for the galaxy instance used to create the BioCompute Object.",
+                    "examples": [
+                        "https://galaxy.aws.biochemistry.gwu.edu/"
+                    ],
+                    "format": "uri"
+                },
+                "galaxy_version": {
+                    "type": "string",
+                    "description": "The specific version of the Galaxy software used to generate the BioCompute Object.",
+                    "examples": [
+                        "20.01"
+                    ]
+                }
+            }
+        }
+    }
+}
diff --git a/config/schemas/1.1.0/license_extension.json b/config/schemas/1.1.0/license_extension.json
new file mode 100644
index 00000000..dabe9024
--- /dev/null
+++ b/config/schemas/1.1.0/license_extension.json
@@ -0,0 +1,41 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/license/license_extension.json",
+    "type": "object",
+    "description": "The extension to add additional licenses.",
+    "required": ["licence_extension", "extension_schema"],
+    "additionalProperties": false,
+    "properties":{
+        "extension_schema": {
+            "title": "extension_schema",
+            "type": "string",
+            "format": "uri",
+            "description": "The schema applied to the extension object",
+            "examples": [
+                "http://www.w3id.org/biocompute/extension_domain/example.json"
+            ]
+        },
+        "licence_extension":{
+            "required": [
+                "data_license",
+                "scripts_license"
+            ],
+            "properties": {
+                "data_license": {
+                    "type": "string",
+                    "examples": [
+                        "https://github.com/example/repo1"
+                    ],
+                    "format": "uri"
+                },
+                "scripts_license": {
+                    "type": "string",
+                    "examples": [
+                        "https://github.com/example/repo1"
+                    ],
+                    "format": "uri"
+                }
+            }
+        }
+    }
+}
diff --git a/config/schemas/1.1.0/scm_extension.json b/config/schemas/1.1.0/scm_extension.json
new file mode 100644
index 00000000..ed29c550
--- /dev/null
+++ b/config/schemas/1.1.0/scm_extension.json
@@ -0,0 +1,67 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "https://w3id.org/biocompute/extension_domain/1.1.0/scm/scm_extension.json",
+    "title": "scm_extension",
+    "type": "object",
+    "description": "The external references extension to a SCM repository",
+    "required": ["scm_extension", "extension_schema"],
+    "additionalProperties": false,
+    "properties":{
+        "extension_schema": {
+            "title": "extension_schema",
+            "type": "string",
+            "format": "uri",
+            "description": "The schema applied to the extension object",
+            "examples": [
+                "http://www.w3id.org/biocompute/extension_domain/example.json"
+            ]
+            
+        },
+        "scm_extension":{
+            "required": [
+                "scm_repository",
+                "scm_type",
+                "scm_commit",
+                "scm_path"
+            ],
+            "properties": {
+                "scm_repository": {
+                    "type": "string",
+                    "examples": [
+                        "https://github.com/example/repo1"
+                    ],
+                    "format": "uri"
+                },
+                "scm_type": {
+                    "type": "string",
+                    "enum": [
+                        "git",
+                        "svn",
+                        "hg",
+                        "other"
+                    ]
+                },
+                "scm_commit": {
+                    "type": "string",
+                    "examples": [
+                        "c9ffea0b60fa3bcf8e138af7c99ca141a6b8fb21"
+                    ]
+                },
+                "scm_path": {
+                    "type": "string",
+                    "examples": [
+                        "workflow/hive-viral-mutation-detection.cwl"
+                    ],
+                    "format": "string"
+                },
+                "scm_preview": {
+                    "type": "string",
+                    "examples": [
+                        "https://github.com/example/repo1/blob/c9ffea0b60fa3bcf8e138af7c99ca141a6b8fb21/workflow/hive-viral-mutation-detection.cwl"
+                    ],
+                    "format": "uri"
+                }
+            }
+        }
+    }
+}
diff --git a/config/schemas/1.2.0/dataset_extension.json b/config/schemas/1.2.0/dataset_extension.json
new file mode 100644
index 00000000..f71efaa4
--- /dev/null
+++ b/config/schemas/1.2.0/dataset_extension.json
@@ -0,0 +1,78 @@
+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/dataset/dataset_extension.json",
+  "title": "dataset_extension",
+  "type": "object",
+  "description": "The external references extension to list additional licenses and dataset catagories for a dataset BCO (dsBCO).",
+  "required": ["dataset_extension", "extension_schema"],
+  "additionalProperties": false,
+  "properties": {
+    "dataset_extension": {
+      "type": "object",
+      "additionalProperties": false,
+      "required": ["dataset_categories"],
+      "properties": {
+        "additional_license": {
+          "type": "object",
+          "description": "The additional license property contains the details about the licenses applied to the dataset and the script or tool/software used to process the given dataset.",
+          "additionalProperties": false,
+          "properties": {
+            "data_license": {
+              "title": "data_license",
+              "type": "string",
+              "description": "The license applied to the data or the dataset by the author",
+              "examples": ["https://creativecommons.org/licenses/by/4.0/"]
+            },
+            "script_license": {
+              "title": "script_license",
+              "type": "string",
+              "description": "The license applied to the computational script or the tool/software developed to process (parse, QC, align) the input dataset for a final output dataset.",
+              "examples": ["https://www.gnu.org/licenses/gpl-3.0.en.html"]
+            }
+          }
+        },
+        "dataset_categories": {
+          "title": "dataset_categories",
+          "type": "array",
+          "description": "Dataset categories describe and provide more information about the dataset which can be used to classify, group, sort and filter datasets.",
+          "items": {
+            "required": ["category_value", "category_name"],
+            "additionalProperties": false,
+            "properties": {
+              "category_value": {
+                "type": "string",
+                "title": "category_value",
+                "description": "An explanation about the purpose of this instance.",
+                "examples": ["Homo sapiens"]
+              },
+              "category_name": {
+                "type": "string",
+                "title": "category_name",
+                "description": "An explanation about the purpose of this instance.",
+                "enum": [
+                  "species",
+                  "molecule",
+                  "tag",
+                  "tags",
+                  "priority",
+                  "file_type",
+                  "status",
+                  "scope"
+                ]
+              }
+            }
+          }
+        }
+      }
+    },
+    "extension_schema": {
+      "title": "extension_schema",
+      "type": "string",
+      "format": "uri",
+      "description": "The schema applied to the extension object",
+      "examples": [
+        "http://www.w3id.org/biocompute/extension_domain/example.json"
+      ]
+    }
+  }
+}
diff --git a/config/schemas/1.2.0/fhir_extension.json b/config/schemas/1.2.0/fhir_extension.json
new file mode 100644
index 00000000..0eb9da95
--- /dev/null
+++ b/config/schemas/1.2.0/fhir_extension.json
@@ -0,0 +1,57 @@
+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "$id": "https://w3id.org/biocompute/extension_domain/1.1.0/fhir/fhir_extension.json",
+  "title": "fhir_extension",
+  "type": "object",
+  "description": "The external references extension to FHIR resource",
+  "required": ["fhir_extension", "extension_schema"],
+  "additionalProperties": false,
+  "properties": {
+    "extension_schema": {
+      "title": "extension_schema",
+      "type": "string",
+      "format": "uri",
+      "description": "The schema applied to the extension object",
+      "examples": [
+        "http://www.w3id.org/biocompute/extension_domain/example.json"
+      ]
+    },
+    "fhir_extension": {
+      "title": "",
+      "type": "array",
+      "decription": "",
+      "items": {
+        "required": ["fhir_endpoint", "fhir_version", "fhir_resources"],
+        "properties": {
+          "fhir_endpoint": {
+            "type": "string",
+            "description": "Base URI of FHIR server where the resources are stored",
+            "examples": ["http://fhirtest.uhn.ca/baseDstu3"],
+            "format": "uri"
+          },
+          "fhir_version": {
+            "type": "string",
+            "description": "FHIR version of the server endpoint"
+          },
+          "fhir_resources": {
+            "type": "array",
+            "items": {
+              "type": "object",
+              "required": ["fhir_resource", "fhir_id"],
+              "properties": {
+                "fhir_resource": {
+                  "type": "string",
+                  "description": "Type of FHIR resource used"
+                },
+                "fhir_id": {
+                  "type": "string",
+                  "description": "Server-specific identifier string"
+                }
+              }
+            }
+          }
+        }
+      }
+    }
+  }
+}
diff --git a/config/schemas/1.2.0/galaxy_extension.json b/config/schemas/1.2.0/galaxy_extension.json
new file mode 100644
index 00000000..7367d546
--- /dev/null
+++ b/config/schemas/1.2.0/galaxy_extension.json
@@ -0,0 +1,36 @@
+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/galaxy/galaxy_extension.json",
+  "title": "galaxy_extension",
+  "type": "object",
+  "description": "The external references **example** extension for a Galaxy BCO.",
+  "required": ["galaxy_extension", "extension_schema"],
+  "additionalProperties": false,
+  "properties": {
+    "extension_schema": {
+      "type": "string",
+      "format": "uri",
+      "description": "The schema applied to the extension object",
+      "examples": [
+        "http://www.w3id.org/biocompute/extension_domain/example.json"
+      ]
+    },
+    "galaxy_extension": {
+      "type": "object",
+      "required": ["galaxy_url", "galaxy_version"],
+      "properties": {
+        "galaxy_url": {
+          "type": "string",
+          "description": "The base url for the galaxy instance used to create the BioCompute Object.",
+          "examples": ["https://galaxy.aws.biochemistry.gwu.edu/"],
+          "format": "uri"
+        },
+        "galaxy_version": {
+          "type": "string",
+          "description": "The specific version of the Galaxy software used to generate the BioCompute Object.",
+          "examples": ["20.01"]
+        }
+      }
+    }
+  }
+}
diff --git a/config/schemas/1.2.0/license_extension.json b/config/schemas/1.2.0/license_extension.json
new file mode 100644
index 00000000..118c7585
--- /dev/null
+++ b/config/schemas/1.2.0/license_extension.json
@@ -0,0 +1,34 @@
+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "$id": "http://www.w3id.org/biocompute/extension_domain/1.1.0/license/license_extension.json",
+  "type": "object",
+  "description": "The extension to add additional licenses.",
+  "required": ["licence_extension", "extension_schema"],
+  "additionalProperties": false,
+  "properties": {
+    "extension_schema": {
+      "title": "extension_schema",
+      "type": "string",
+      "format": "uri",
+      "description": "The schema applied to the extension object",
+      "examples": [
+        "http://www.w3id.org/biocompute/extension_domain/example.json"
+      ]
+    },
+    "licence_extension": {
+      "required": ["data_license", "scripts_license"],
+      "properties": {
+        "data_license": {
+          "type": "string",
+          "examples": ["https://github.com/example/repo1"],
+          "format": "uri"
+        },
+        "scripts_license": {
+          "type": "string",
+          "examples": ["https://github.com/example/repo1"],
+          "format": "uri"
+        }
+      }
+    }
+  }
+}
diff --git a/config/schemas/1.2.0/scm_extension.json b/config/schemas/1.2.0/scm_extension.json
new file mode 100644
index 00000000..af0f8c7f
--- /dev/null
+++ b/config/schemas/1.2.0/scm_extension.json
@@ -0,0 +1,50 @@
+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "$id": "https://w3id.org/biocompute/extension_domain/1.1.0/scm/scm_extension.json",
+  "title": "scm_extension",
+  "type": "object",
+  "description": "The external references extension to a SCM repository",
+  "required": ["scm_extension", "extension_schema"],
+  "additionalProperties": false,
+  "properties": {
+    "extension_schema": {
+      "title": "extension_schema",
+      "type": "string",
+      "format": "uri",
+      "description": "The schema applied to the extension object",
+      "examples": [
+        "http://www.w3id.org/biocompute/extension_domain/example.json"
+      ]
+    },
+    "scm_extension": {
+      "required": ["scm_repository", "scm_type", "scm_commit", "scm_path"],
+      "properties": {
+        "scm_repository": {
+          "type": "string",
+          "examples": ["https://github.com/example/repo1"],
+          "format": "uri"
+        },
+        "scm_type": {
+          "type": "string",
+          "enum": ["git", "svn", "hg", "other"]
+        },
+        "scm_commit": {
+          "type": "string",
+          "examples": ["c9ffea0b60fa3bcf8e138af7c99ca141a6b8fb21"]
+        },
+        "scm_path": {
+          "type": "string",
+          "examples": ["workflow/hive-viral-mutation-detection.cwl"],
+          "format": "string"
+        },
+        "scm_preview": {
+          "type": "string",
+          "examples": [
+            "https://github.com/example/repo1/blob/c9ffea0b60fa3bcf8e138af7c99ca141a6b8fb21/workflow/hive-viral-mutation-detection.cwl"
+          ],
+          "format": "uri"
+        }
+      }
+    }
+  }
+}
diff --git a/config/IEEE/2791object.json b/config/schemas/2791/2791object.json
similarity index 100%
rename from config/IEEE/2791object.json
rename to config/schemas/2791/2791object.json
diff --git a/config/IEEE/description_domain.json b/config/schemas/2791/description_domain.json
similarity index 100%
rename from config/IEEE/description_domain.json
rename to config/schemas/2791/description_domain.json
diff --git a/config/IEEE/error_domain.json b/config/schemas/2791/error_domain.json
similarity index 100%
rename from config/IEEE/error_domain.json
rename to config/schemas/2791/error_domain.json
diff --git a/config/IEEE/execution_domain.json b/config/schemas/2791/execution_domain.json
similarity index 100%
rename from config/IEEE/execution_domain.json
rename to config/schemas/2791/execution_domain.json
diff --git a/config/IEEE/io_domain.json b/config/schemas/2791/io_domain.json
similarity index 100%
rename from config/IEEE/io_domain.json
rename to config/schemas/2791/io_domain.json
diff --git a/config/IEEE/parametric_domain.json b/config/schemas/2791/parametric_domain.json
similarity index 100%
rename from config/IEEE/parametric_domain.json
rename to config/schemas/2791/parametric_domain.json
diff --git a/config/IEEE/provenance_domain.json b/config/schemas/2791/provenance_domain.json
similarity index 100%
rename from config/IEEE/provenance_domain.json
rename to config/schemas/2791/provenance_domain.json
diff --git a/config/IEEE/usability_domain.json b/config/schemas/2791/usability_domain.json
similarity index 100%
rename from config/IEEE/usability_domain.json
rename to config/schemas/2791/usability_domain.json
diff --git a/config/settings.py b/config/settings.py
index 42adc2f6..52ed91dd 100644
--- a/config/settings.py
+++ b/config/settings.py
@@ -9,29 +9,35 @@
 BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
 
 # --- SECURITY SETTINGS --- #
-# Load the server config file.
-secrets = configparser.ConfigParser()
-secrets.read(BASE_DIR + "/.secrets")
-DEBUG = secrets["SERVER"]["DEBUG"]
-VERSION = secrets["SERVER"]["SERVER_VERSION"]
-# Set the anonymous user's key.
-ANON_KEY = secrets["DJANGO_KEYS"]["ANON_KEY"]
-ALLOWED_HOSTS = secrets["SERVER"]["ALLOWED_HOSTS"].split(',')
-# SECURITY WARNING: keep the secret key used in production secret!
-SECRET_KEY = secrets["DJANGO_KEYS"]["SECRET_KEY"]
-
-# SECURITY WARNING: don't run with debug turned on in production!
-
-# The publicly accessible hostname.
-HOSTNAME = secrets["SERVER"]["HOSTNAME"]
-# The human-readable hostname.
-HUMAN_READABLE_HOSTNAME = secrets["SERVER"]["HUMAN_READABLE_HOSTNAME"]
-# The publicly accessible hostname.
-PUBLIC_HOSTNAME = secrets["SERVER"]["PUBLIC_HOSTNAME"]
-
-
-CORS_ORIGIN_ALLOW_ALL = True
-CORS_ORIGIN_WHITELIST = ["*"]
+# Load the server .secrets file.
+try:
+    secrets = configparser.ConfigParser()
+    secrets.read(BASE_DIR + "/.secrets")
+    DEBUG = secrets["SERVER"]["DEBUG"]
+    SERVER_VERSION = secrets["SERVER"]["SERVER_VERSION"]
+    ANON_KEY = secrets["DJANGO_KEYS"]["ANON_KEY"]
+    ALLOWED_HOSTS = secrets["SERVER"]["ALLOWED_HOSTS"].split(',')
+    SECRET_KEY = secrets["DJANGO_KEYS"]["SECRET_KEY"]
+    HOSTNAME = secrets["SERVER"]["HOSTNAME"]
+    DATABASE=secrets["SERVER"]["DATABASE"]
+    HUMAN_READABLE_HOSTNAME = secrets["SERVER"]["HUMAN_READABLE_HOSTNAME"]
+    PUBLIC_HOSTNAME = secrets["SERVER"]["PUBLIC_HOSTNAME"]
+    EMAIL_BACKEND = secrets["SERVER"]["EMAIL_BACKEND"]
+
+except KeyError:
+    SECRET_KEY="^2uql114+yy0d$xv6+lm8*#1=uxs_oa0zw0bvu^fpi4tc9x0i"
+    ANON_KEY="627626823549f787c3ec763ff687169206626149"
+    DEBUG=True
+    ALLOWED_HOSTS="*"
+    SERVER_VERSION="24.08.08"
+    HOSTNAME="127.0.0.1:8000"
+    HUMAN_READABLE_HOSTNAME="Local Test BCODB"
+    PUBLIC_HOSTNAME="http://127.0.0.1:8000"
+    SERVER_URL="http://localhost:3000"
+    DATABASE="db.sqlite3"
+    EMAIL_BACKEND="django.core.mail.backends.console.EmailBackend"
+    CORS_ORIGIN_ALLOW_ALL = True
+    CORS_ORIGIN_WHITELIST = ["*"]
 
 # Use the REST framework
 REST_FRAMEWORK = {
@@ -144,7 +150,7 @@
 DATABASES = {
     "default": {
         "ENGINE": "django.db.backends.sqlite3",
-        "NAME": secrets["SERVER"]["DATABASE"],
+        "NAME": DATABASE,
     }
 }
 
@@ -178,7 +184,7 @@
 # Make the object naming accessible as a dictionary.
 
 # emailing notifications
-EMAIL_BACKEND = secrets["SERVER"]["EMAIL_BACKEND"]
+EMAIL_BACKEND = EMAIL_BACKEND
 EMAIL_HOST = "localhost"
 EMAIL_PORT = 25
 DEFAULT_AUTO_FIELD = "django.db.models.AutoField"
diff --git a/config/urls.py b/config/urls.py
index fc7add75..cf9b78a9 100755
--- a/config/urls.py
+++ b/config/urls.py
@@ -11,7 +11,7 @@
 from rest_framework import permissions
 from biocompute.apis import DraftRetrieveApi, PublishedRetrieveApi
 
-VERSION = settings.VERSION
+VERSION = settings.SERVER_VERSION
 
 ShcemaView = get_schema_view(
     openapi.Info(
diff --git a/docker-compose.yml b/docker-compose.yml
index 78ece6f2..5535b497 100644
--- a/docker-compose.yml
+++ b/docker-compose.yml
@@ -1,24 +1,18 @@
-#cat docker-compose.yml
-
-version: '3.4'
 
 services:
   bco-api:
     platform: linux/amd64
     build: .
-    image: ghcr.io/biocompute-objects/bco_api:23.07
     container_name: bco-api
-    volumes:
-       - ./data/db.sqlite3:/biocompute_api/db.sqlite3
-       - ./data/server.conf:/biocompute_api/server.conf
+    # volumes:
+    #   - ./db.sqlite3:/biocompute_api/db.sqlite3
+    #   - ./.secrets:/biocompute_api/.secrets
     environment:
       TZ: 'America/New_York'
-      ENV DJANGO_SUPERUSER_PASSWORD: "BioCompute123"
-      ENV DJANGO_SUPERUSER_USERNAME: "BioComputeSuperUser"
-      ENV DJANGO_SUPERUSER_EMAIL: "BioComputeSuperUser@gwu.edu"
+
     ports:
       - "8000:8000"
-    read_only: true
+
     tmpfs:
       - /tmp
     restart: unless-stopped
diff --git a/docs/deployment/dockerDeployment.md b/docs/deployment/dockerDeployment.md
index e69de29b..2440a7ac 100644
--- a/docs/deployment/dockerDeployment.md
+++ b/docs/deployment/dockerDeployment.md
@@ -0,0 +1,88 @@
+# BCODB Docker Deployment
+
+
+### Requirements
+- Python 3: [3.10.6 reccomended](https://www.python.org/downloads/release/python-3106/)
+- [PyEnv](https://github.com/pyenv/pyenv) (optional but recommended for Mac/Linux)
+- Docker:
+    - [Docker Desktop for Linux](https://docs.docker.com/desktop/install/linux-install/)
+    - [Docker Desktop for Mac (macOS)](https://docs.docker.com/desktop/install/mac-install/)
+    - [Docker Desktop for Windows](https://docs.docker.com/desktop/install/windows-install/)
+
+
+## Clone the repository
+```
+git clone https://github.com/biocompute-objects/bco_api
+```
+
+**Make sure you are on the desired branch (Check for latest branch):**
+
+```
+git switch [DESIRED BRANCH TAG]
+```
+
+## Enter the repository
+```
+cd bco_api
+```
+## Configure the DB settings using the `.secrets` file:
+
+### OPTION 1: Generate the secrets file 
+
+In the project root copy the `.secrets.example` to `.secrets`
+
+```
+cp .secrets.example .secrets
+```
+#### Generate the DJANGO_KEY
+Generate a 32-bytes long PSK key using the `openssl` command or `PowerShell` command.
+
+##### Mac/Linux:
+```
+openssl rand -base64 32
+```
+##### Windows:
+```   
+[Convert]::ToBase64String((1..32 | ForEach-Object { Get-Random -Minimum 0 -Maximum 256 }) -as [byte[]])
+```
+
+Use a text editor to open the `.secrets` file and update the rest of the variables. For details on each of the variables see the [configuration](/docs/config.md) documentation. 
+
+### OPTION 2: Use the `local_deployment.secrets` file
+Fromt the project root:
+```
+cp admin_only/local_deployment.secrets .secrets
+```
+
+### Building the BCO API via Docker
+
+A docker file is provided to allow easy building of the BCO API.  This can be done from the root directory (the directory with Dockerfile in it) by running:
+
+`docker build -t bco_api:latest .`
+
+This will build a container named `bco_api` with the tag `latest`.
+
+The build process (via the `entrypoint.sh` script) will check for an existing database in the repository and run migrations. If no database is present one will be created and the test data will be loaded (taken from `config/fixtures/local_data.json`).
+
+### Running the container via Docker
+
+The BCO Api container can be run via docker on the command line in Linux/Windows by running:
+
+`docker run --rm --network host -it bco_api:latest`
+
+The BCO Api container can be run via docker on the command line in MacOS by running:
+
+`docker run --rm -p 8000:8000 -it bco_api:latest`
+
+This will expose the server at `http://127.0.0.1:8000`, whitch is where all of the default settings will expect to find the BCODB. 
+
+#### Overriding the port
+
+It is possible to override the port 8000 to whatever port is desired.  This is done by running the container with 8080 representing the desired port.
+
+`docker run --rm --network host -it bco_api:latest 0.0.0.0:8080`
+
+
+NOTE: The ip address of 0.0.0.0 is to allow the web serer to properly associate with 127.0.0.1 - if given 127.0.0.1 it will not allow communications outside of the container!
+
+You can also give it a specific network created with `docker network create` if you wanted to give assigned IP addresses.
diff --git a/entrypoint.sh b/entrypoint.sh
new file mode 100755
index 00000000..80cf23a6
--- /dev/null
+++ b/entrypoint.sh
@@ -0,0 +1,15 @@
+#!/bin/bash
+# entrypoint.sh
+
+# Check if the SQLite database file exists and run migrations if it doesn't
+if [ ! -f "db.sqlite3" ]; then
+  echo "Database not found. Running migrations..."
+  python3 manage.py migrate
+  python3 manage.py loaddata config/fixtures/local_data.json
+else
+  echo "Database exists. Running migrations."
+  python3 manage.py migrate
+fi
+
+# Start the Django server
+exec "$@"