From 76a02445266f4b3c935893a92736031729f00aab Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Wed, 25 Oct 2023 20:56:06 -0700 Subject: [PATCH 01/11] Pipeline.get_sample_names() fix for plate-replicates Fix for get_sample_names() that checks to see if the sample-sheet or pre-prep file defines replicates and returns the unique values from orig_name instead of sample-names if so. --- sequence_processing_pipeline/Pipeline.py | 37 +- .../tests/data/good-mapping-file.txt | 8 +- .../tests/data/pre_prep_w_replicates.csv | 50 +- .../tests/test_Pipeline.py | 479 +++++++++--------- 4 files changed, 292 insertions(+), 282 deletions(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index 570e9563..cc540ecd 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -459,21 +459,50 @@ def get_sample_names(self, project_name=None): def _get_sample_names_from_sample_sheet(self, project_name): if project_name is None: - return [x.Sample_Name for x in self.sample_sheet.samples] + if 'orig_name' in self.sample_sheet.samples[0]: + # return set as a list to match non-replicate results. + return sorted(list({x.orig_name for x in + self.sample_sheet.samples})) + else: + return [x.Sample_Name for x in self.sample_sheet.samples] else: # Since the project-name is stored in an internal variable # in a third-party library, convert the data structure to # JSON using the exposed method and obtain from the result. jsn = json_loads(self.sample_sheet.to_json()) - return [x['Sample_Name'] for x in jsn['Data'] if - f'{project_name}_' in x['Sample_Project']] + if 'orig_name' in self.sample_sheet.samples[0]: + return [x['orig_name'] for x in jsn['Data'] + if f'{project_name}_' in x['Sample_Project']] + else: + return [x['Sample_Name'] for x in jsn['Data'] + if f'{project_name}_' in x['Sample_Project']] def _get_sample_names_from_mapping_file(self, project_name): if project_name is None: - return list(self.mapping_file.sample_name) + if 'orig_name' in self.mapping_file.columns: + # because sample-names w/out replicate suffix will naturally + # appear more than once, we need to remove duplicates before + # returning them in list form. Sort the list to return a + # predictable order for testing. + return sorted(list(set(self.mapping_file.orig_name))) + else: + return list(self.mapping_file.sample_name) else: df = self.mapping_file[self.mapping_file['project_name'] == project_name] + + # since orig_name is currently a required column whether or not + # the pre-prep file contains replicates, search for the presence + # of contains_replicates column instead, as it's not required for + # non-replicate pre-prep files. + if 'contains_replicates' in df.columns: + if set(df['contains_replicates']) == {True}: + # contains_replicates should be either all True or all + # False. We need not assume non-boolean data-types. + # With replicates, assume there are duplicate entries in + # orig_name column. + return list(set((df['orig_name']))) + return list(df['sample_name']) def _parse_project_name(self, project_name, short_names): diff --git a/sequence_processing_pipeline/tests/data/good-mapping-file.txt b/sequence_processing_pipeline/tests/data/good-mapping-file.txt index 5a603867..ac065a2d 100644 --- a/sequence_processing_pipeline/tests/data/good-mapping-file.txt +++ b/sequence_processing_pipeline/tests/data/good-mapping-file.txt @@ -162,8 +162,7 @@ Sample_Name BARCODE center_name center_project_name experiment_design_descriptio 6.22.22.RK.LH GTTGATACGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.LH_E7 E7 6.22.22.RK.RH GAAGAGGGTTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.RH_F7 F7 6.23.22.RK.FH AATGGTTCAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.FH_H8 H8 -6.23.22.RK.LH.A TAACAATAATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G8 G8 -6.23.22.RK.LH.B GCTCGAAGATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G10 G10 +6.23.22.RK.LH TAACAATAATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G8 G8 6.24.22.RK.FH ACGACGCATTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.FH_F10 F10 6.24.22.RK.RH ACTTGGTGTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.RH_E10 E10 6.25.22.RK.FH ACTACTGAGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.25.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.FH_A11 A11 @@ -171,8 +170,7 @@ Sample_Name BARCODE center_name center_project_name experiment_design_descriptio 6.25.22.RK.RH CGCACCCATACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.25.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.RH_H10 H10 6.26.22.RK.FH CGGTGACCTACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.FH_C8 C8 6.26.22.RK.LH CTTAGTGCAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.LH_D8 D8 -6.26.22.RK.RH.A GTCAACGCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_E8 E8 -6.26.22.RK.RH.B TGAGTGGTCTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_F8 F8 +6.26.22.RK.RH GTCAACGCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_E8 E8 6.27.22.RK.FH CATATAGCCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.FH_B8 B8 6.27.22.RK.LH TGAGTATGAGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.LH_H7 H7 6.27.22.RK.RH AATTTAGGTAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.RH_A8 A8 @@ -240,7 +238,7 @@ Sample_Name BARCODE center_name center_project_name experiment_design_descriptio 9.2.22.RK.LH CTCCGAACAACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V168 GT 1331807 9.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.LH_A4 A4 9.2.22.RK.RH CCACTGCCCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V180 GT 1331807 9.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.RH_B4 B4 9.20.22.RK.FH ACACCGCACAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V151 GT 1331807 9.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.FH_G11 G11 -9.20.22.RK.LH CAGCCCTACCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V163 GT 1331807 9.20.22.RK,LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK,LH_H11 H11 +9.20.22.RK.LH CAGCCCTACCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V163 GT 1331807 9.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK,LH_H11 H11 9.20.22.RK.RH GTACTCGAACCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V139 GT 1331807 9.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.RH_F11 F11 9.21.22.RK.FH ATAGTCCTTTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V136 GT 1331807 9.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.FH_F8 F8 9.21.22.RK.LH TATAGGCTCCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V160 GT 1331807 9.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.LH_H8 H8 diff --git a/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv b/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv index 40b837f9..7c245746 100644 --- a/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv +++ b/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv @@ -1,25 +1,25 @@ -orig_name sample_name contains_replicates barcode primer primer_plate well_id_96 well_id_384 plating extractionkit_lot extraction_robot tm1000_8_tool primer_date mastermix_lot water_lot processing_robot tm300_8_tool tm50_8_tool sample_plate project_name well_description experiment_design_description library_construction_protocol linker platform run_center run_date run_prefix pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name instrument_model runid -9.18.19.RK.ST.900 9.18.19.RK.ST.900.A1 TRUE ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.700 9.20.19.RK.ST.700.A5 true GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A7 tRuE AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.21.19.RK.ST.500 9.21.19.RK.ST.500.A9 TRUE GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.22.19.RK.ST.700 9.22.19.RK.ST.700.A11 TRUE GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.700 9.16.19.RK.ST.700.A13 TRUE AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A15 TRUE ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.18.19.RK.ST.900 9.18.19.RK.ST.900.B1 TRUE ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 B1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.B3 TRUE AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 B3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.700 9.20.19.RK.ST.700.B5 TRUE GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 B5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.B7 TRUE AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 B7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.21.19.RK.ST.500 9.21.19.RK.ST.500.B9 TRUE GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 B9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.22.19.RK.ST.700 9.22.19.RK.ST.700.B11 TRUE GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 B11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.700 9.16.19.RK.ST.700.B13 TRUE AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 B13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.B15 TRUE ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 B15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.18.19.RK.ST.900 9.18.19.RK.ST.900.A2 TRUE ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A2 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A4 TRUE AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A4 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.700 9.20.19.RK.ST.700.A6 TRUE GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A6 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A8 TRUE AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A8 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.21.19.RK.ST.500 9.21.19.RK.ST.500.A10 TRUE GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A10 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.22.19.RK.ST.700 9.22.19.RK.ST.700.A12 TRUE GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A12 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.700 9.16.19.RK.ST.700.A14 TRUE AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A14 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A16 TRUE ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A16 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq + orig_name sample_name contains_replicates barcode primer primer_plate well_id_96 well_id_384 plating extractionkit_lot extraction_robot tm1000_8_tool primer_date mastermix_lot water_lot processing_robot tm300_8_tool tm50_8_tool sample_plate project_name well_description experiment_design_description library_construction_protocol linker platform run_center run_date run_prefix pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name instrument_model runid tm10_8_tool +0 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +1 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +2 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +3 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +4 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +5 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +6 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +7 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +8 9.18.19.RK.ST.900 9.18.19.RK.ST.900.B1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 B1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +9 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.B3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 B3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +10 9.20.19.RK.ST.700 9.20.19.RK.ST.700.B5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 B5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +11 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.B7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 B7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +12 9.21.19.RK.ST.500 9.21.19.RK.ST.500.B9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 B9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +13 9.22.19.RK.ST.700 9.22.19.RK.ST.700.B11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 B11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +14 9.16.19.RK.ST.700 9.16.19.RK.ST.700.B13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 B13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +15 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.B15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 B15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +16 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A2 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A2 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +17 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A4 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A4 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +18 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A6 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A6 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +19 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A8 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A8 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +20 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A10 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A10 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +21 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A12 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A12 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +22 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A14 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A14 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +23 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A16 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A16 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq diff --git a/sequence_processing_pipeline/tests/test_Pipeline.py b/sequence_processing_pipeline/tests/test_Pipeline.py index d827a30b..27c6b614 100644 --- a/sequence_processing_pipeline/tests/test_Pipeline.py +++ b/sequence_processing_pipeline/tests/test_Pipeline.py @@ -35,6 +35,7 @@ def setUp(self): self.good_run_dir = self.path(self.good_run_id) self.runinfo_file = self.path(self.good_run_id, 'RunInfo.xml') self.rtacomplete_file = self.path(self.good_run_id, 'RTAComplete.txt') + self.good_sheet_w_replicates = self.path('good_sheet_w_replicates.csv') # most of the tests here were written with the assumption that these # files already exist. @@ -284,63 +285,63 @@ def test_generate_sample_information_files(self): exp_first_lines = { f'{self.good_run_id}_NYU_BMS_Melanoma_13059_blanks.tsv': - 'BLANK1.1A\t2021-10-21\t193\t' - 'Control\tNegative\tSterile w' - 'ater blank\turban biome\tres' - 'earch facility\tsterile wate' - 'r\tmisc environment\tUSA:CA:' - 'San Diego\tBLANK1.1A\t32.5\t' - '-117.25\tcontrol blank\tmeta' - 'genome\t256318\tBLANK1.1A\tN' - 'YU_BMS_Melanoma\tTRUE\t' - 'UCSD\tFALSE', + 'BLANK1.1A\t2021-10-21\t193\t' + 'Control\tNegative\tSterile w' + 'ater blank\turban biome\tres' + 'earch facility\tsterile wate' + 'r\tmisc environment\tUSA:CA:' + 'San Diego\tBLANK1.1A\t32.5\t' + '-117.25\tcontrol blank\tmeta' + 'genome\t256318\tBLANK1.1A\tN' + 'YU_BMS_Melanoma\tTRUE\t' + 'UCSD\tFALSE', f'{self.good_run_id}_Feist_11661_blanks.tsv': - 'BLANK.40.12G\t2021-10-21\t193\tControl' - '\tNegative\tSterile water blank\turban ' - 'biome\tresearch facility\tsterile water' - '\tmisc environment\tUSA:CA:San Diego\tB' - 'LANK.40.12G\t32.5\t-117.25\tcontrol bla' - 'nk\tmetagenome\t256318\tBLANK.40.12G\t' - 'Feist\tTRUE\tUCSD\tFALSE', + 'BLANK.40.12G\t2021-10-21\t193\tControl' + '\tNegative\tSterile water blank\turban ' + 'biome\tresearch facility\tsterile water' + '\tmisc environment\tUSA:CA:San Diego\tB' + 'LANK.40.12G\t32.5\t-117.25\tcontrol bla' + 'nk\tmetagenome\t256318\tBLANK.40.12G\t' + 'Feist\tTRUE\tUCSD\tFALSE', f'{self.good_run_id}_Gerwick_6123_blanks.tsv': - 'BLANK.41.12G\t2021-10-21\t193\tControl' - '\tNegative\tSterile water blank\turban' - ' biome\tresearch facility\tsterile wat' - 'er\tmisc environment\tUSA:CA:San Diego' - '\tBLANK.41.12G\t32.5\t-117.25\tcontrol' - ' blank\tmetagenome\t256318\tBLANK.41.1' - '2G\tGerwick\tTRUE\tUCSD\tFALSE' + 'BLANK.41.12G\t2021-10-21\t193\tControl' + '\tNegative\tSterile water blank\turban' + ' biome\tresearch facility\tsterile wat' + 'er\tmisc environment\tUSA:CA:San Diego' + '\tBLANK.41.12G\t32.5\t-117.25\tcontrol' + ' blank\tmetagenome\t256318\tBLANK.41.1' + '2G\tGerwick\tTRUE\tUCSD\tFALSE' } exp_last_lines = { f'{self.good_run_id}_NYU_BMS_Melanoma_13059_blanks.tsv': - 'BLANK4.4H\t2021-10-21\t193\t' - 'Control\tNegative\tSterile w' - 'ater blank\turban biome\tres' - 'earch facility\tsterile wate' - 'r\tmisc environment\tUSA:CA:' - 'San Diego\tBLANK4.4H\t32.5\t' - '-117.25\tcontrol blank\tmeta' - 'genome\t256318\tBLANK4.4H\tN' - 'YU_BMS_Melanoma\tTRUE\t' - 'UCSD\tFALSE', + 'BLANK4.4H\t2021-10-21\t193\t' + 'Control\tNegative\tSterile w' + 'ater blank\turban biome\tres' + 'earch facility\tsterile wate' + 'r\tmisc environment\tUSA:CA:' + 'San Diego\tBLANK4.4H\t32.5\t' + '-117.25\tcontrol blank\tmeta' + 'genome\t256318\tBLANK4.4H\tN' + 'YU_BMS_Melanoma\tTRUE\t' + 'UCSD\tFALSE', f'{self.good_run_id}_Feist_11661_blanks.tsv': - 'BLANK.43.12H\t2021-10-21\t193\tControl' - '\tNegative\tSterile water blank\turban' - ' biome\tresearch facility\tsterile wat' - 'er\tmisc environment\tUSA:CA:San Diego' - '\tBLANK.43.12H\t32.5\t-117.25\tcontrol' - ' blank\tmetagenome\t256318\tBLANK.43.1' - '2H\tFeist\tTRUE\tUCSD\tFALSE', + 'BLANK.43.12H\t2021-10-21\t193\tControl' + '\tNegative\tSterile water blank\turban' + ' biome\tresearch facility\tsterile wat' + 'er\tmisc environment\tUSA:CA:San Diego' + '\tBLANK.43.12H\t32.5\t-117.25\tcontrol' + ' blank\tmetagenome\t256318\tBLANK.43.1' + '2H\tFeist\tTRUE\tUCSD\tFALSE', f'{self.good_run_id}_Gerwick_6123_blanks.tsv': - 'BLANK.41.12G\t2021-10-21\t193\tContro' - 'l\tNegative\tSterile water blank\turb' - 'an biome\tresearch facility\tsterile ' - 'water\tmisc environment\tUSA:CA:San D' - 'iego\tBLANK.41.12G\t32.5\t-117.25\tco' - 'ntrol blank\tmetagenome\t256318\tBLAN' - 'K.41.12G\tGerwick\tTRUE\tUCSD\t' - 'FALSE' + 'BLANK.41.12G\t2021-10-21\t193\tContro' + 'l\tNegative\tSterile water blank\turb' + 'an biome\tresearch facility\tsterile ' + 'water\tmisc environment\tUSA:CA:San D' + 'iego\tBLANK.41.12G\t32.5\t-117.25\tco' + 'ntrol blank\tmetagenome\t256318\tBLAN' + 'K.41.12G\tGerwick\tTRUE\tUCSD\t' + 'FALSE' } for some_path in paths: @@ -429,7 +430,6 @@ def test_generate_sample_information_files_with_additional_meta(self): self.assertEqual(obs, exp) def test_get_sample_ids(self): - exp_sample_ids = ['CDPH-SAL__Salmonella__Typhi__MDL-143', 'CDPH-SAL_Salmonella_Typhi_MDL-144', 'CDPH-SAL_Salmonella_Typhi_MDL-145', @@ -1388,6 +1388,43 @@ def test_get_sample_names(self): obs = set(pipeline.get_sample_names('Gerwick')) self.assertEqual(obs, exp) + pipeline = Pipeline(self.good_config_file, self.good_run_id, + self.good_sheet_w_replicates, None, + self.output_file_path, self.qiita_id, + Pipeline.METAGENOMIC_PTYPE, None) + + obs = set(pipeline.get_sample_names()) + + exp = {"BLANK.43.12G", "BLANK.43.12H", "RMA.KHP.rpoS.Mage.Q97D", + "RMA.KHP.rpoS.Mage.Q97L", "RMA.KHP.rpoS.Mage.Q97N", + "RMA.KHP.rpoS.Mage.Q97E", "JBI.KHP.HGL.021", "JBI.KHP.HGL.022", + "JBI.KHP.HGL.023", "JBI.KHP.HGL.024", "AP581451B02", + "EP256645B01", "EP112567B02", "EP337425B01", "LP127890A01", + "EP159692B04", "EP987683A01", "AP959450A03", "SP464350A04", + "EP121011B01", "BLANK.43.12G", "BLANK.43.12H", + "RMA.KHP.rpoS.Mage.Q97D", "RMA.KHP.rpoS.Mage.Q97L", + "RMA.KHP.rpoS.Mage.Q97N", "RMA.KHP.rpoS.Mage.Q97E", + "JBI.KHP.HGL.021", "JBI.KHP.HGL.022", "JBI.KHP.HGL.023", + "JBI.KHP.HGL.024", "AP581451B02", "EP256645B01", "EP112567B02", + "EP337425B01", "LP127890A01", "EP159692B04", "EP987683A01", + "AP959450A03", "SP464350A04", "EP121011B01", "BLANK.43.12G", + "BLANK.43.12H", "RMA.KHP.rpoS.Mage.Q97D", + "RMA.KHP.rpoS.Mage.Q97L", "RMA.KHP.rpoS.Mage.Q97N", + "RMA.KHP.rpoS.Mage.Q97E", "JBI.KHP.HGL.021", + "JBI.KHP.HGL.022", "JBI.KHP.HGL.023", "JBI.KHP.HGL.024", + "AP581451B02", "EP256645B01", "EP112567B02", "EP337425B01", + "LP127890A01", "EP159692B04", "EP987683A01", "AP959450A03", + "SP464350A04", "EP121011B01"} + + # verify that when dealing with a sample-sheet containing replicates, + # get_sample_names() only returns the sample-names themselves, w/out + # replicate well-ids appended to them. + self.assertEqual(obs, exp) + + # verify that a replicate sample-name, specifically replicate A1 is + # was not returned by get_sample_names(). + self.assertNotIn('BLANK.43.12G.A1', obs) + def test_get_project_info(self): exp_proj_info = [ {'project_name': 'NYU_BMS_Melanoma_13059', 'qiita_id': '13059'}, @@ -1451,7 +1488,7 @@ def test_parse_project_name(self): ('Foobar', None), ('', None), (None, None)] - } + } for t_set in tests: for test, exp in tests[t_set]: @@ -1485,6 +1522,7 @@ def setUp(self): self.runinfo_file = self.path(self.good_run_id, 'RunInfo.xml') self.rtacomplete_file = self.path(self.good_run_id, 'RTAComplete.txt') self.sample_sheet_path = self.path('good-sample-sheet.csv') + self.pre_prep_w_replicates = self.path('pre_prep_w_replicates.csv') # most of the tests here were written with the assumption that these # files already exist. @@ -1706,198 +1744,123 @@ def test_generate_sample_information_files(self): # aren't needed. def test_get_sample_ids(self): - exp_sample_ids = ['11.1.21.RK.FH', '11.1.21.RK.LH', - '11.1.21.RK.RH', '11.10.21.RK.FH', - '11.10.21.RK.LH', '11.10.21.RK.RH', - '11.12.21.RK.FH', '11.12.21.RK.LH', - '11.12.21.RK.RH', '11.13.21.RK.FH', - '11.13.21.RK.LH', '11.13.21.RK.RH', - '11.17.21.RK.FH', '11.17.21.RK.LH', - '11.17.21.RK.RH', '11.2.21.RK.FH', - '11.2.21.RK.LH', '11.2.21.RK.RH', - '11.3.21.RK.FH', '11.3.21.RK.LH', - '11.3.21.RK.RH', '11.4.21.RK.FH', - '11.4.21.RK.LH', '11.4.21.RK.RH', - '11.5.21.RK.FH', '11.5.21.RK.LH', - '11.5.21.RK.RH', '11.6.21.RK.FH', - '11.6.21.RK.LH', '11.6.21.RK.RH', - '11.7.21.RK.FH', '11.7.21.RK.LH', - '11.7.21.RK.RH', '11.8.21.RK.FH', - '11.8.21.RK.LH', '5.1.22.RK.FH', - '5.1.22.RK.LH', '5.1.22.RK.RH', - '5.10.22.RK.RH', '5.11.22.RK.FH', - '5.11.22.RK.LH', '5.11.22.RK.RH', - '5.12.22.RK.FH', '5.12.22.RK.LH', - '5.12.22.RK.RH', '5.13.22.RK.FH', - '5.13.22.RK.LH', '5.13.22.RK.RH', - '5.14.22.RK.FH', '5.14.22.RK.LH', - '5.14.22.RK.RH', '5.15.22.RK.FH', - '5.15.22.RK.LH', '5.15.22.RK.RH', - '5.16.22.RK.FH', '5.16.22.RK.LH', - '5.16.22.RK.RH', '5.17.22.RK.FH', - '5.17.22.RK.LH', '5.17.22.RK.RH', - '5.18.22.RK.FH', '5.18.22.RK.LH', - '5.18.22.RK.RH', '5.19.22.RK.FH', - '5.19.22.RK.LH', '5.19.22.RK.RH', - '5.2.22.RK.FH', '5.2.22.RK.LH', - '5.2.22.RK.RH', '5.20.22.RK.FH', - '5.20.22.RK.LH', '5.20.22.RK.RH', - '5.21.22.RK.FH', '5.21.22.RK.LH', - '5.21.22.RK.RH', '5.22.22.RK.FH', - '5.22.22.RK.LH', '5.22.22.RK.RH', - '5.23.22.RK.FH', '5.23.22.RK.LH', - '5.23.22.RK.RH', '5.24.22.RK.FH', - '5.24.22.RK.LH', '5.24.22.RK.RH', - '5.27.22.RK.FH', '5.27.22.RK.LH', - '5.27.22.RK.RH', '5.29.22.RK.FH', - '5.29.22.RK.LH', '5.29.22.RK.RH', - '5.3.22.RK.FH', '5.3.22.RK.LH', - '5.3.22.RK.RH', '5.30.22.RK.FH', - '5.30.22.RK.LH', '5.30.22.RK.RH', - '5.31.22.RK.FH', '5.31.22.RK.LH', - '5.31.22.RK.RH', '5.4.22.RK.FH', - '5.4.22.RK.LH', '5.4.22.RK.RH', - '5.5.22.RK.FH', '5.5.22.RK.LH', - '5.5.22.RK.RH', '5.6.22.RK.FH', - '5.6.22.RK.LH', '5.6.22.RK.RH', - '5.7.22.RK.FH', '5.7.22.RK.LH', - '5.7.22.RK.RH', '5.8.22.RK.FH', - '5.8.22.RK.LH', '5.8.22.RK.RH', - '5.9.22.RK.FH', '5.9.22.RK.LH', - '5.9.22.RK.RH', '6.1.22.RK.FH', - '6.1.22.RK.LH', '6.1.22.RK.RH', - '6.10.22.RK.FH', '6.10.22.RK.LH', - '6.10.22.RK.RH', '6.11.22.RK.FH', - '6.11.22.RK.LH', '6.11.22.RK.RH', - '6.12.22.RK.FH', '6.12.22.RK.LH', - '6.12.22.RK.RH', '6.13.22.RK.FH', - '6.13.22.RK.LH', '6.13.22.RK.RH', - '6.14.22.RK.FH', '6.14.22.RK.LH', - '6.14.22.RK.RH', '6.15.22.RK.FH', - '6.15.22.RK.LH', '6.15.22.RK.RH', - '6.16.22.RK.FH', '6.16.22.RK.LH', - '6.16.22.RK.RH', '6.17.22.RK.FH', - '6.17.22.RK.LH', '6.17.22.RK.RH', - '6.18.22.RK.FH', '6.18.22.RK.LH', - '6.18.22.RK.RH', '6.19.22.RK.FH', - '6.19.22.RK.LH', '6.19.22.RK.RH', - '6.2.22.RK.FH', '6.2.22.RK.LH', - '6.2.22.RK.RH', '6.20.22.RK.FH', - '6.20.22.RK.LH', '6.20.22.RK.RH', - '6.21.22.RK.FH', '6.21.22.RK.LH', - '6.21.22.RK.RH', '6.22.22.RK.FH', - '6.22.22.RK.LH', '6.22.22.RK.RH', - '6.23.22.RK.FH', '6.23.22.RK.LH.A', - '6.23.22.RK.LH.B', '6.24.22.RK.FH', - '6.24.22.RK.RH', '6.25.22.RK.FH', - '6.25.22.RK.LH', '6.25.22.RK.RH', - '6.26.22.RK.FH', '6.26.22.RK.LH', - '6.26.22.RK.RH.A', '6.26.22.RK.RH.B', - '6.27.22.RK.FH', '6.27.22.RK.LH', - '6.27.22.RK.RH', '6.28.22.RK.FH', - '6.28.22.RK.LH', '6.28.22.RK.RH', - '6.29.22.RK.FH', '6.29.22.RK.LH', - '6.29.22.RK.RH', '6.3.22.RK.FH', - '6.3.22.RK.LH', '6.3.22.RK.RH', - '6.30.22.RK.FH', '6.30.22.RK.LH', - '6.30.22.RK.RH', '6.4.22.RK.FH', - '6.4.22.RK.LH', '6.4.22.RK.RH', - '6.5.22.RK.FH', '6.5.22.RK.LH', - '6.5.22.RK.RH', '6.6.22.RK.FH', - '6.6.22.RK.LH', '6.6.22.RK.RH', - '6.7.22.RK.FH', '6.7.22.RK.LH', - '6.7.22.RK.RH', '6.8.22.RK.FH', - '6.8.22.RK.LH', '6.8.22.RK.RH', - '6.9.22.RK.FH', '6.9.22.RK.LH', - '6.9.22.RK.RH', '9.1.22.RK.FH', - '9.1.22.RK.LH', '9.1.22.RK.RH', - '9.10.22.RK.FH', '9.10.22.RK.LH', - '9.10.22.RK.RH', '9.11.22.RK.FH', - '9.11.22.RK.LH', '9.11.22.RK.RH', - '9.12.22.RK.FH', '9.12.22.RK.LH', - '9.12.22.RK.RH', '9.13.22.RK.FH', - '9.13.22.RK.LH', '9.13.22.RK.RH', - '9.14.22.RK.FH', '9.14.22.RK.LH', - '9.14.22.RK.RH', '9.15.22.RK.FH', - '9.15.22.RK.LH', '9.15.22.RK.RH', - '9.16.22.RK.FH', '9.16.22.RK.LH', - '9.16.22.RK.RH', '9.17.22.RK.FH', - '9.17.22.RK.LH', '9.17.22.RK.RH', - '9.19.22.RK.FH', '9.19.22.RK.LH', - '9.19.22.RK.RH', '9.2.22.RK.FH', - '9.2.22.RK.LH', '9.2.22.RK.RH', - '9.20.22.RK.FH', '9.20.22.RK.LH', - '9.20.22.RK.RH', '9.21.22.RK.FH', - '9.21.22.RK.LH', '9.21.22.RK.RH', - '9.22.22.RK.FH', '9.22.22.RK.LH', - '9.22.22.RK.RH', '9.23.22.RK.FH', - '9.23.22.RK.LH', '9.23.22.RK.RH', - '9.24.22.RK.FH', '9.24.22.RK.LH', - '9.24.22.RK.RH', '9.25.22.RK.FH', - '9.25.22.RK.LH', '9.26.22.RK.FH', - '9.26.22.RK.LH', '9.26.22.RK.RH', - '9.27.22.RK.FH', '9.27.22.RK.LH', - '9.27.22.RK.RH', '9.29.22.RK.FH', - '9.29.22.RK.LH', '9.29.22.RK.RH', - '9.3.22.RK.FH', '9.3.22.RK.LH', - '9.3.22.RK.RH', '9.30.22.RK.FH', - '9.30.22.RK.LH', '9.30.22.RK.RH', - '9.4.22.RK.FH', '9.4.22.RK.LH', - '9.4.22.RK.RH', '9.5.22.RK.FH', - '9.5.22.RK.LH', '9.5.22.RK.RH', - '9.6.22.RK.FH', '9.6.22.RK.LH', - '9.6.22.RK.RH', '9.7.22.RK.FH', - '9.7.22.RK.LH', '9.7.22.RK.RH', - '9.8.22.RK.FH', '9.8.22.RK.LH', - '9.8.22.RK.RH', '9.9.22.RK.FH', - '9.9.22.RK.LH', '9.9.22.RK.RH', - 'BLANK.242.4C', 'BLANK238.3A', - 'BLANK238.3B', 'BLANK238.3C', - 'BLANK238.3D', 'BLANK238.3E', - 'BLANK238.3F', 'BLANK238.3G', - 'BLANK238.3H', 'BLANK239.10A', - 'BLANK239.10B', 'BLANK239.10C', - 'BLANK239.10D', 'BLANK239.10E', - 'BLANK239.10F', 'BLANK239.10G', - 'BLANK239.10H', 'BLANK240.3A', - 'BLANK240.3B', 'BLANK240.3C', - 'BLANK240.3D', 'BLANK240.3E', - 'BLANK240.3F', 'BLANK240.3G', - 'BLANK240.3H', 'BLANK242.10A', - 'BLANK242.10B', 'BLANK242.10C', - 'BLANK242.10D', 'BLANK242.10E', - 'BLANK242.10F', 'BLANK242.10G', - 'BLANK242.10H', 'BLANK242.11A', - 'BLANK242.11B', 'BLANK242.11C', - 'BLANK242.11D', 'BLANK242.11E', - 'BLANK242.11F', 'BLANK242.11G', - 'BLANK242.11H', 'BLANK242.12A', - 'BLANK242.12B', 'BLANK242.12C', - 'BLANK242.12D', 'BLANK242.12E', - 'BLANK242.12F', 'BLANK242.12G', - 'BLANK242.12H', 'BLANK242.4D', - 'BLANK242.4E', 'BLANK242.4F', - 'BLANK242.4G', 'BLANK242.4H', - 'BLANK242.5A', 'BLANK242.5B', - 'BLANK242.5C', 'BLANK242.5D', - 'BLANK242.5E', 'BLANK242.5F', - 'BLANK242.5G', 'BLANK242.5H', - 'BLANK242.6A', 'BLANK242.6B', - 'BLANK242.6C', 'BLANK242.6D', - 'BLANK242.6E', 'BLANK242.6F', - 'BLANK242.6G', 'BLANK242.6H', - 'BLANK242.7A', 'BLANK242.7B', - 'BLANK242.7C', 'BLANK242.7D', - 'BLANK242.7E', 'BLANK242.7F', - 'BLANK242.7G', 'BLANK242.7H', - 'BLANK242.8A', 'BLANK242.8B', - 'BLANK242.8C', 'BLANK242.8D', - 'BLANK242.8E', 'BLANK242.8F', - 'BLANK242.8G', 'BLANK242.8H', - 'BLANK242.9A', 'BLANK242.9B', - 'BLANK242.9C', 'BLANK242.9D', - 'BLANK242.9E', 'BLANK242.9F', - 'BLANK242.9G', 'BLANK242.9H'] + exp = ['11.1.21.RK.FH', '11.1.21.RK.LH', '11.1.21.RK.RH', + '11.10.21.RK.FH', '11.10.21.RK.LH', '11.10.21.RK.RH', + '11.12.21.RK.FH', '11.12.21.RK.LH', '11.12.21.RK.RH', + '11.13.21.RK.FH', '11.13.21.RK.LH', '11.13.21.RK.RH', + '11.17.21.RK.FH', '11.17.21.RK.LH', '11.17.21.RK.RH', + '11.2.21.RK.FH', '11.2.21.RK.LH', '11.2.21.RK.RH', + '11.3.21.RK.FH', '11.3.21.RK.LH', '11.3.21.RK.RH', + '11.4.21.RK.FH', '11.4.21.RK.LH', '11.4.21.RK.RH', + '11.5.21.RK.FH', '11.5.21.RK.LH', '11.5.21.RK.RH', + '11.6.21.RK.FH', '11.6.21.RK.LH', '11.6.21.RK.RH', + '11.7.21.RK.FH', '11.7.21.RK.LH', '11.7.21.RK.RH', + '11.8.21.RK.FH', '11.8.21.RK.LH', '5.1.22.RK.FH', + '5.1.22.RK.LH', '5.1.22.RK.RH', '5.10.22.RK.RH', + '5.11.22.RK.FH', '5.11.22.RK.LH', '5.11.22.RK.RH', + '5.12.22.RK.FH', '5.12.22.RK.LH', '5.12.22.RK.RH', + '5.13.22.RK.FH', '5.13.22.RK.LH', '5.13.22.RK.RH', + '5.14.22.RK.FH', '5.14.22.RK.LH', '5.14.22.RK.RH', + '5.15.22.RK.FH', '5.15.22.RK.LH', '5.15.22.RK.RH', + '5.16.22.RK.FH', '5.16.22.RK.LH', '5.16.22.RK.RH', + '5.17.22.RK.FH', '5.17.22.RK.LH', '5.17.22.RK.RH', + '5.18.22.RK.FH', '5.18.22.RK.LH', '5.18.22.RK.RH', + '5.19.22.RK.FH', '5.19.22.RK.LH', '5.19.22.RK.RH', + '5.2.22.RK.FH', '5.2.22.RK.LH', '5.2.22.RK.RH', + '5.20.22.RK.FH', '5.20.22.RK.LH', '5.20.22.RK.RH', + '5.21.22.RK.FH', '5.21.22.RK.LH', '5.21.22.RK.RH', + '5.22.22.RK.FH', '5.22.22.RK.LH', '5.22.22.RK.RH', + '5.23.22.RK.FH', '5.23.22.RK.LH', '5.23.22.RK.RH', + '5.24.22.RK.FH', '5.24.22.RK.LH', '5.24.22.RK.RH', + '5.27.22.RK.FH', '5.27.22.RK.LH', '5.27.22.RK.RH', + '5.29.22.RK.FH', '5.29.22.RK.LH', '5.29.22.RK.RH', + '5.3.22.RK.FH', '5.3.22.RK.LH', '5.3.22.RK.RH', + '5.30.22.RK.FH', '5.30.22.RK.LH', '5.30.22.RK.RH', + '5.31.22.RK.FH', '5.31.22.RK.LH', '5.31.22.RK.RH', + '5.4.22.RK.FH', '5.4.22.RK.LH', '5.4.22.RK.RH', + '5.5.22.RK.FH', '5.5.22.RK.LH', '5.5.22.RK.RH', + '5.6.22.RK.FH', '5.6.22.RK.LH', '5.6.22.RK.RH', + '6.23.22.RK.LH', '6.26.22.RK.RH', '5.8.22.RK.FH', + '5.7.22.RK.FH', '5.7.22.RK.LH', '5.7.22.RK.RH', + '5.8.22.RK.LH', '5.8.22.RK.RH', '5.9.22.RK.FH', + '5.9.22.RK.RH', '6.1.22.RK.FH', '6.1.22.RK.LH', + '6.10.22.RK.FH', '6.10.22.RK.LH', '6.10.22.RK.RH', + '6.11.22.RK.FH', '5.9.22.RK.LH', '6.1.22.RK.RH', + '6.11.22.RK.LH', '6.11.22.RK.RH', '6.12.22.RK.FH', + '6.12.22.RK.LH', '6.12.22.RK.RH', '6.13.22.RK.FH', + '6.13.22.RK.LH', '6.13.22.RK.RH', '6.14.22.RK.FH', + '6.14.22.RK.LH', '6.14.22.RK.RH', '6.15.22.RK.FH', + '6.15.22.RK.LH', '6.15.22.RK.RH', '6.16.22.RK.FH', + '6.16.22.RK.LH', '6.16.22.RK.RH', '6.17.22.RK.FH', + '6.17.22.RK.LH', '6.17.22.RK.RH', '6.18.22.RK.FH', + '6.18.22.RK.LH', '6.18.22.RK.RH', '6.19.22.RK.FH', + '6.19.22.RK.LH', '6.19.22.RK.RH', '6.2.22.RK.FH', + '6.2.22.RK.LH', '6.2.22.RK.RH', '6.20.22.RK.FH', + '6.20.22.RK.LH', '6.20.22.RK.RH', '6.21.22.RK.FH', + '6.21.22.RK.LH', '6.21.22.RK.RH', '6.22.22.RK.FH', + '6.22.22.RK.LH', '6.22.22.RK.RH', '6.23.22.RK.FH', + '6.24.22.RK.FH', '6.24.22.RK.RH', '6.25.22.RK.FH', + '6.25.22.RK.LH', '6.25.22.RK.RH', '6.26.22.RK.FH', + '6.26.22.RK.LH', '6.27.22.RK.FH', '6.27.22.RK.LH', + '6.27.22.RK.RH', '6.28.22.RK.FH', '6.28.22.RK.LH', + '6.28.22.RK.RH', '6.29.22.RK.FH', '6.29.22.RK.LH', + '6.29.22.RK.RH', '6.3.22.RK.FH', '6.3.22.RK.LH', '6.3.22.RK.RH', + '6.30.22.RK.FH', '6.30.22.RK.LH', '6.30.22.RK.RH', + '6.4.22.RK.FH', '6.4.22.RK.LH', '6.4.22.RK.RH', '6.5.22.RK.FH', + '6.5.22.RK.LH', '6.5.22.RK.RH', '6.6.22.RK.FH', '6.6.22.RK.LH', + '6.6.22.RK.RH', '6.7.22.RK.FH', '6.7.22.RK.LH', '6.7.22.RK.RH', + '6.8.22.RK.FH', '6.8.22.RK.LH', '6.8.22.RK.RH', '6.9.22.RK.FH', + '6.9.22.RK.LH', '6.9.22.RK.RH', '9.1.22.RK.FH', '9.1.22.RK.LH', + '9.1.22.RK.RH', '9.10.22.RK.FH', '9.10.22.RK.LH', + '9.10.22.RK.RH', '9.11.22.RK.FH', '9.11.22.RK.LH', + '9.11.22.RK.RH', '9.12.22.RK.FH', '9.12.22.RK.LH', + '9.12.22.RK.RH', '9.13.22.RK.FH', '9.13.22.RK.LH', + '9.13.22.RK.RH', '9.14.22.RK.FH', '9.14.22.RK.LH', + '9.14.22.RK.RH', '9.15.22.RK.FH', '9.15.22.RK.LH', + '9.15.22.RK.RH', '9.16.22.RK.FH', '9.16.22.RK.LH', + '9.16.22.RK.RH', '9.17.22.RK.FH', '9.17.22.RK.LH', + '9.17.22.RK.RH', '9.19.22.RK.FH', '9.19.22.RK.LH', + '9.19.22.RK.RH', '9.2.22.RK.FH', '9.2.22.RK.LH', '9.2.22.RK.RH', + '9.20.22.RK.FH', '9.20.22.RK.LH', '9.20.22.RK.RH', + '9.21.22.RK.FH', '9.21.22.RK.LH', '9.21.22.RK.RH', + '9.22.22.RK.FH', '9.22.22.RK.LH', '9.22.22.RK.RH', + '9.23.22.RK.FH', '9.23.22.RK.LH', '9.23.22.RK.RH', + '9.24.22.RK.FH', '9.24.22.RK.LH', '9.24.22.RK.RH', + '9.25.22.RK.FH', '9.25.22.RK.LH', '9.26.22.RK.FH', + '9.26.22.RK.LH', '9.26.22.RK.RH', '9.27.22.RK.FH', + '9.27.22.RK.LH', '9.27.22.RK.RH', '9.29.22.RK.FH', + '9.29.22.RK.LH', '9.29.22.RK.RH', '9.3.22.RK.FH', + '9.3.22.RK.LH', '9.3.22.RK.RH', '9.30.22.RK.FH', + '9.30.22.RK.LH', '9.30.22.RK.RH', '9.4.22.RK.FH', + '9.4.22.RK.LH', '9.4.22.RK.RH', '9.5.22.RK.FH', '9.5.22.RK.LH', + '9.5.22.RK.RH', '9.6.22.RK.FH', '9.6.22.RK.LH', '9.6.22.RK.RH', + '9.7.22.RK.FH', '9.7.22.RK.LH', '9.7.22.RK.RH', '9.8.22.RK.FH', + '9.8.22.RK.LH', '9.8.22.RK.RH', '9.9.22.RK.FH', '9.9.22.RK.LH', + '9.9.22.RK.RH', 'BLANK.242.4C', 'BLANK238.3A', 'BLANK238.3B', + 'BLANK238.3C', 'BLANK238.3D', 'BLANK238.3E', 'BLANK238.3F', + 'BLANK238.3G', 'BLANK238.3H', 'BLANK239.10A', 'BLANK239.10B', + 'BLANK239.10C', 'BLANK239.10D', 'BLANK239.10E', 'BLANK239.10F', + 'BLANK239.10G', 'BLANK239.10H', 'BLANK240.3A', 'BLANK240.3B', + 'BLANK240.3C', 'BLANK240.3D', 'BLANK240.3E', 'BLANK240.3F', + 'BLANK240.3G', 'BLANK240.3H', 'BLANK242.10A', 'BLANK242.10B', + 'BLANK242.10C', 'BLANK242.10D', 'BLANK242.10E', 'BLANK242.10F', + 'BLANK242.10G', 'BLANK242.10H', 'BLANK242.11A', 'BLANK242.11B', + 'BLANK242.11C', 'BLANK242.11D', 'BLANK242.11E', 'BLANK242.11F', + 'BLANK242.11G', 'BLANK242.11H', 'BLANK242.12A', 'BLANK242.12B', + 'BLANK242.12C', 'BLANK242.12D', 'BLANK242.12E', 'BLANK242.12F', + 'BLANK242.12G', 'BLANK242.12H', 'BLANK242.4D', 'BLANK242.4E', + 'BLANK242.4F', 'BLANK242.4G', 'BLANK242.4H', 'BLANK242.5A', + 'BLANK242.5B', 'BLANK242.5C', 'BLANK242.5D', 'BLANK242.5E', + 'BLANK242.5F', 'BLANK242.5G', 'BLANK242.5H', 'BLANK242.6A', + 'BLANK242.6B', 'BLANK242.6C', 'BLANK242.6D', 'BLANK242.6E', + 'BLANK242.6F', 'BLANK242.6G', 'BLANK242.6H', 'BLANK242.7A', + 'BLANK242.7B', 'BLANK242.7C', 'BLANK242.7D', 'BLANK242.7E', + 'BLANK242.7F', 'BLANK242.7G', 'BLANK242.7H', 'BLANK242.8A', + 'BLANK242.8B', 'BLANK242.8C', 'BLANK242.8D', 'BLANK242.8E', + 'BLANK242.8F', 'BLANK242.8G', 'BLANK242.8H', 'BLANK242.9A', + 'BLANK242.9B', 'BLANK242.9C', 'BLANK242.9D', 'BLANK242.9E', + 'BLANK242.9F', 'BLANK242.9G', 'BLANK242.9H'] + # test sample-information-file generation. pipeline = Pipeline(self.good_config_file, self.good_run_id, @@ -1909,7 +1872,8 @@ def test_get_sample_ids(self): None) obs = pipeline.get_sample_ids() - self.assertEqual(sorted(obs), sorted(exp_sample_ids)) + + self.assertEqual(sorted(obs), sorted(exp)) def test_get_sample_names(self): exp = ['11.1.21.RK.FH', '11.1.21.RK.LH', '11.1.21.RK.RH', @@ -1964,10 +1928,10 @@ def test_get_sample_names(self): '6.20.22.RK.LH', '6.20.22.RK.RH', '6.21.22.RK.FH', '6.21.22.RK.LH', '6.21.22.RK.RH', '6.22.22.RK.FH', '6.22.22.RK.LH', '6.22.22.RK.RH', '6.23.22.RK.FH', - '6.23.22.RK.LH.A', '6.23.22.RK.LH.B', '6.24.22.RK.FH', + '6.23.22.RK.LH', '6.24.22.RK.FH', '6.24.22.RK.RH', '6.25.22.RK.FH', '6.25.22.RK.LH', '6.25.22.RK.RH', '6.26.22.RK.FH', '6.26.22.RK.LH', - '6.26.22.RK.RH.A', '6.26.22.RK.RH.B', '6.27.22.RK.FH', + '6.26.22.RK.RH', '6.27.22.RK.FH', '6.27.22.RK.LH', '6.27.22.RK.RH', '6.28.22.RK.FH', '6.28.22.RK.LH', '6.28.22.RK.RH', '6.29.22.RK.FH', '6.29.22.RK.LH', '6.29.22.RK.RH', '6.3.22.RK.FH', @@ -2038,6 +2002,7 @@ def test_get_sample_names(self): None) obs = pipeline.get_sample_names() + self.assertEqual(sorted(obs), sorted(exp)) # mapping file only contains one project, but this test will @@ -2045,6 +2010,26 @@ def test_get_sample_names(self): obs = pipeline.get_sample_names('ABTX_20230208_ABTX_11052') self.assertEqual(sorted(obs), sorted(exp)) + pipeline = Pipeline(self.good_config_file, + self.good_run_id, + None, + self.pre_prep_w_replicates, + self.output_file_path, + self.qiita_id, + Pipeline.AMPLICON_PTYPE, + None) + + obs = pipeline.get_sample_names() + + # verify that a replicate sample-name is not included in the results. + self.assertNotIn('9.18.19.RK.ST.900.A1', obs) + + exp = {'9.16.19.RK.ST.1100', '9.16.19.RK.ST.700', '9.18.19.RK.ST.900', + '9.19.19.RK.ST.1100', '9.20.19.RK.ST.1100', + '9.20.19.RK.ST.700', '9.21.19.RK.ST.500', '9.22.19.RK.ST.700'} + + self.assertEqual(set(obs), exp) + def test_get_project_info(self): exp_proj_info = [ {'project_name': 'ABTX_20230208_ABTX_11052', @@ -2195,7 +2180,6 @@ def test_process_run_info_file(self): "c2cowart@ucsd.edu,SomeProject,,,,,", "antgonza@gmail.com,AnotherProject,,,,,", ",,,,,,"] - good_dummy_sheet2 = [ "[Header],,,,,,", "IEMFileVersion,4,,,,,", "Date,10/27/22,,,,,", "Workflow,GenerateFASTQ,,,,,", "Application,FASTQ Only,,,,,", @@ -2214,6 +2198,5 @@ def test_process_run_info_file(self): "c2cowart@ucsd.edu,SomeProject,,,,,", "antgonza@gmail.com,AnotherProject,,,,,", ",,,,,,"] - if __name__ == '__main__': unittest.main() From e72e79eb6137a93a1d9cd4a6ede7cbdb6ac504db Mon Sep 17 00:00:00 2001 From: Charles Cowart <42684307+charles-cowart@users.noreply.github.com> Date: Thu, 26 Oct 2023 09:44:48 -0700 Subject: [PATCH 02/11] Update sequence_processing_pipeline/Pipeline.py Co-authored-by: Daniel McDonald --- sequence_processing_pipeline/Pipeline.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index cc540ecd..1fab06b8 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -461,8 +461,8 @@ def _get_sample_names_from_sample_sheet(self, project_name): if project_name is None: if 'orig_name' in self.sample_sheet.samples[0]: # return set as a list to match non-replicate results. - return sorted(list({x.orig_name for x in - self.sample_sheet.samples})) + return sorted({x.orig_name for x in + self.sample_sheet.samples}) else: return [x.Sample_Name for x in self.sample_sheet.samples] else: From 09422ae4029e8f1e774f5ecf46325adb7834887e Mon Sep 17 00:00:00 2001 From: Charles Cowart <42684307+charles-cowart@users.noreply.github.com> Date: Thu, 26 Oct 2023 10:16:43 -0700 Subject: [PATCH 03/11] Update sequence_processing_pipeline/Pipeline.py Co-authored-by: Daniel McDonald --- sequence_processing_pipeline/Pipeline.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index 1fab06b8..34eca571 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -484,7 +484,7 @@ def _get_sample_names_from_mapping_file(self, project_name): # appear more than once, we need to remove duplicates before # returning them in list form. Sort the list to return a # predictable order for testing. - return sorted(list(set(self.mapping_file.orig_name))) + return sorted(set(self.mapping_file.orig_name)) else: return list(self.mapping_file.sample_name) else: From a9a3d18671e7619cac7b2880fb125a809ebd5c94 Mon Sep 17 00:00:00 2001 From: Charles Cowart <42684307+charles-cowart@users.noreply.github.com> Date: Thu, 26 Oct 2023 10:30:15 -0700 Subject: [PATCH 04/11] Update sequence_processing_pipeline/Pipeline.py Co-authored-by: Daniel McDonald --- sequence_processing_pipeline/Pipeline.py | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index 34eca571..87814e44 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -471,11 +471,13 @@ def _get_sample_names_from_sample_sheet(self, project_name): # JSON using the exposed method and obtain from the result. jsn = json_loads(self.sample_sheet.to_json()) if 'orig_name' in self.sample_sheet.samples[0]: - return [x['orig_name'] for x in jsn['Data'] - if f'{project_name}_' in x['Sample_Project']] + key = 'orig_name' else: - return [x['Sample_Name'] for x in jsn['Data'] - if f'{project_name}_' in x['Sample_Project']] + key = 'Sample_Name' + + project_name = f'{project_name}_' + return [x[key] for x in jsn['Data'] + if project_name in x['Sample_Project']] def _get_sample_names_from_mapping_file(self, project_name): if project_name is None: From 58522d0632a6158d21254716527e5af3d4fb78dd Mon Sep 17 00:00:00 2001 From: Charles Cowart <42684307+charles-cowart@users.noreply.github.com> Date: Thu, 26 Oct 2023 10:30:59 -0700 Subject: [PATCH 05/11] Update sequence_processing_pipeline/Pipeline.py Co-authored-by: Daniel McDonald --- sequence_processing_pipeline/Pipeline.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index 87814e44..f05250d0 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -498,7 +498,7 @@ def _get_sample_names_from_mapping_file(self, project_name): # of contains_replicates column instead, as it's not required for # non-replicate pre-prep files. if 'contains_replicates' in df.columns: - if set(df['contains_replicates']) == {True}: + if set(df['contains_replicates']) == {True, }: # contains_replicates should be either all True or all # False. We need not assume non-boolean data-types. # With replicates, assume there are duplicate entries in From acd702997b22f70a7a22393d32499df1b0e39bfb Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Thu, 26 Oct 2023 13:54:28 -0700 Subject: [PATCH 06/11] Updates based on feedback + additional test --- sequence_processing_pipeline/Pipeline.py | 36 ++++++++++++------- .../tests/test_Pipeline.py | 14 ++++++++ 2 files changed, 37 insertions(+), 13 deletions(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index f05250d0..4847d83f 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -453,16 +453,19 @@ def get_sample_names(self, project_name=None): # test for self.mapping_file, since self.sample_sheet will be # defined in both cases. if self.mapping_file is not None: - return self._get_sample_names_from_mapping_file(project_name) + results = self._get_sample_names_from_mapping_file(project_name) else: - return self._get_sample_names_from_sample_sheet(project_name) + results = self._get_sample_names_from_sample_sheet(project_name) + + # sort all results before returning. sets will automatically be + # converted to lists. + return sorted(results) def _get_sample_names_from_sample_sheet(self, project_name): if project_name is None: if 'orig_name' in self.sample_sheet.samples[0]: # return set as a list to match non-replicate results. - return sorted({x.orig_name for x in - self.sample_sheet.samples}) + return {x.orig_name for x in self.sample_sheet.samples} else: return [x.Sample_Name for x in self.sample_sheet.samples] else: @@ -474,8 +477,8 @@ def _get_sample_names_from_sample_sheet(self, project_name): key = 'orig_name' else: key = 'Sample_Name' - - project_name = f'{project_name}_' + + project_name = f'{project_name}_' return [x[key] for x in jsn['Data'] if project_name in x['Sample_Project']] @@ -484,11 +487,10 @@ def _get_sample_names_from_mapping_file(self, project_name): if 'orig_name' in self.mapping_file.columns: # because sample-names w/out replicate suffix will naturally # appear more than once, we need to remove duplicates before - # returning them in list form. Sort the list to return a - # predictable order for testing. - return sorted(set(self.mapping_file.orig_name)) + # returning them. + return set(self.mapping_file.orig_name) else: - return list(self.mapping_file.sample_name) + return self.mapping_file.sample_name else: df = self.mapping_file[self.mapping_file['project_name'] == project_name] @@ -498,14 +500,22 @@ def _get_sample_names_from_mapping_file(self, project_name): # of contains_replicates column instead, as it's not required for # non-replicate pre-prep files. if 'contains_replicates' in df.columns: - if set(df['contains_replicates']) == {True, }: + values = set(df['contains_replicates']) + if values == {True, False}: + # this is a sanity-check. A pre-prep file with both + # values should fail validation during Pipeline creation. + raise ValueError("'contains_replicates' column must either" + " be all True or all False") + elif values == {True, }: # contains_replicates should be either all True or all # False. We need not assume non-boolean data-types. # With replicates, assume there are duplicate entries in # orig_name column. - return list(set((df['orig_name']))) + return set((df['orig_name'])) - return list(df['sample_name']) + # if values == {False, } or is a legacy mapping-file w/out the + # column, simply return sample-names. + return df['sample_name'] def _parse_project_name(self, project_name, short_names): ''' diff --git a/sequence_processing_pipeline/tests/test_Pipeline.py b/sequence_processing_pipeline/tests/test_Pipeline.py index 27c6b614..6c058458 100644 --- a/sequence_processing_pipeline/tests/test_Pipeline.py +++ b/sequence_processing_pipeline/tests/test_Pipeline.py @@ -36,6 +36,7 @@ def setUp(self): self.runinfo_file = self.path(self.good_run_id, 'RunInfo.xml') self.rtacomplete_file = self.path(self.good_run_id, 'RTAComplete.txt') self.good_sheet_w_replicates = self.path('good_sheet_w_replicates.csv') + self.bad_pp_w_repl = self.path('bad_pre_prep_w_replicates.csv') # most of the tests here were written with the assumption that these # files already exist. @@ -1425,6 +1426,19 @@ def test_get_sample_names(self): # was not returned by get_sample_names(). self.assertNotIn('BLANK.43.12G.A1', obs) + # verify that pre-prep files w/a contains_replicates column will fail + # during Pipeline creation before pipeline.get_sample_names() can be + # called. The error message represents Pipeline() attempting to test + # that self.bad_pp_w_repl is a pre-prep file, failing validation, + # assuming it must be a sample-sheet, and then failing validation a + # second time. + with self.assertRaisesRegex(ValueError, "Sample sheet contains " + "invalid characters on line 1"): + Pipeline(self.good_config_file, self.good_run_id, + self.bad_pp_w_repl, None, + self.output_file_path, self.qiita_id, + Pipeline.METAGENOMIC_PTYPE, None) + def test_get_project_info(self): exp_proj_info = [ {'project_name': 'NYU_BMS_Melanoma_13059', 'qiita_id': '13059'}, From c15568e3cec691dcd7a1b55eaf5130c5399d4bc8 Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Thu, 26 Oct 2023 14:00:39 -0700 Subject: [PATCH 07/11] Added new test file --- .../tests/data/bad_pre_prep_w_replicates.csv | 25 +++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 sequence_processing_pipeline/tests/data/bad_pre_prep_w_replicates.csv diff --git a/sequence_processing_pipeline/tests/data/bad_pre_prep_w_replicates.csv b/sequence_processing_pipeline/tests/data/bad_pre_prep_w_replicates.csv new file mode 100644 index 00000000..7d272326 --- /dev/null +++ b/sequence_processing_pipeline/tests/data/bad_pre_prep_w_replicates.csv @@ -0,0 +1,25 @@ + orig_name sample_name contains_replicates barcode primer primer_plate well_id_96 well_id_384 plating extractionkit_lot extraction_robot tm1000_8_tool primer_date mastermix_lot water_lot processing_robot tm300_8_tool tm50_8_tool sample_plate project_name well_description experiment_design_description library_construction_protocol linker platform run_center run_date run_prefix pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name instrument_model runid tm10_8_tool +0 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +1 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A3 False AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +2 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +3 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +4 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +5 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +6 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +7 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +8 9.18.19.RK.ST.900 9.18.19.RK.ST.900.B1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 B1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +9 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.B3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 B3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +10 9.20.19.RK.ST.700 9.20.19.RK.ST.700.B5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 B5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +11 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.B7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 B7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +12 9.21.19.RK.ST.500 9.21.19.RK.ST.500.B9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 B9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +13 9.22.19.RK.ST.700 9.22.19.RK.ST.700.B11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 B11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +14 9.16.19.RK.ST.700 9.16.19.RK.ST.700.B13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 B13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +15 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.B15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 B15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +16 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A2 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A2 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +17 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A4 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A4 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +18 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A6 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A6 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +19 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A8 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A8 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +20 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A10 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A10 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +21 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A12 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A12 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +22 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A14 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A14 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +23 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A16 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A16 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq From 72cde707e16a0f26a2d9cb76dcad319fd871e999 Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Thu, 26 Oct 2023 18:01:54 -0700 Subject: [PATCH 08/11] restored removed lines from good-mapping-file.txt restored removed lines from good-mapping-file.txt and adjusted tests accordingly. --- .../tests/data/good-mapping-file.txt | 766 +++++++++--------- .../tests/test_Pipeline.py | 32 +- 2 files changed, 400 insertions(+), 398 deletions(-) diff --git a/sequence_processing_pipeline/tests/data/good-mapping-file.txt b/sequence_processing_pipeline/tests/data/good-mapping-file.txt index ac065a2d..6299fe36 100644 --- a/sequence_processing_pipeline/tests/data/good-mapping-file.txt +++ b/sequence_processing_pipeline/tests/data/good-mapping-file.txt @@ -1,383 +1,385 @@ Sample_Name BARCODE center_name center_project_name experiment_design_description extraction_robot extractionkit_lot instrument_model library_construction_protocol linker mastermix_lot orig_name pcr_primers platform plating primer primer_date primer_plate processing_robot project_name qiita_prep_id run_center run_date run_prefix runid sample_plate sequencing_meth target_gene target_subfragment tm1000_8_tool tm300_8_tool tm50_8_tool water_lot well_description well_id_96 well_id_384 tm10_8_tool -11.1.21.RK.FH TATGCCAGAGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.1.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.FH_C4 C4 -11.1.21.RK.LH ATCTAGTGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.1.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.LH_D4 D4 -11.1.21.RK.RH TTCCTTAGTAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.1.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.RH_B4 B4 -11.10.21.RK.FH GTGGAGTCTCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.10.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.FH_D1 D1 -11.10.21.RK.LH TGATGTGCTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.10.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.LH_E1 E1 -11.10.21.RK.RH TGACTAATGGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.10.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.RH_C1 C1 -11.12.21.RK.FH GTAGTAGACCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.12.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.FH_E2 E2 -11.12.21.RK.LH CCGGACAAGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.12.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.LH_F2 F2 -11.12.21.RK.RH ACCTTACACCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.12.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.RH_D2 D2 -11.13.21.RK.FH CGCGCCTTAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.13.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.FH_A5 A5 -11.13.21.RK.LH CGTCCGTATGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.13.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.LH_B5 B5 -11.13.21.RK.RH GACTCTGCTCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.13.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.RH_H4 H4 -11.17.21.RK.FH TCCATACCGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.17.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.FH_A2 A2 -11.17.21.RK.LH ATGCTGCAACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.17.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.LH_B2 B2 -11.17.21.RK.RH CGGGACACCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.17.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.RH_C2 C2 -11.2.21.RK.FH TGTGCACGCCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.2.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.FH_F1 F1 -11.2.21.RK.LH CTATGTATTAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.2.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.LH_H1 H1 -11.2.21.RK.RH GGTGAGCAAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.2.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.RH_G1 G1 -11.3.21.RK.FH TAAATATACCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.3.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.FH_G2 G2 -11.3.21.RK.LH ACTCCCGTGTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.3.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.LH_H2 H2 -11.3.21.RK.RH CCTAACGGTCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.3.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.RH_A4 A4 -11.4.21.RK.FH CTCGCCCTCGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.4.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.FH_E4 E4 -11.4.21.RK.LH TACTAACGCGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.4.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.LH_F4 F4 -11.4.21.RK.RH GTCGTCCAAATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.4.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.RH_G4 G4 -11.5.21.RK.FH GTCATGCTCCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.5.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.FH_H5 H5 -11.5.21.RK.LH GCGATCACACCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.5.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.LH_F5 F5 -11.5.21.RK.RH TGCACAGTCGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.5.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.RH_G5 G5 -11.6.21.RK.FH TATGGTACCCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.6.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.FH_A6 A6 -11.6.21.RK.LH ACGTGAGGAACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.6.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.LH_B6 B6 -11.6.21.RK.RH AAGAACTCATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.6.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.RH_C6 C6 -11.7.21.RK.FH ACGCTTAACGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.7.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.FH_D5 D5 -11.7.21.RK.LH CGTTTGGAATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.7.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.LH_C5 C5 -11.7.21.RK.RH TCTCTTTCGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.7.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.RH_E5 E5 -11.8.21.RK.FH AGCCTTCGTCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.8.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.8.21.RK.FH_A1 A1 -11.8.21.RK.LH CGTATAAATGCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 11.8.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.8.21.RK.LH_B1 B1 -5.1.22.RK.FH CAAATTCGGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V72 GT 1331807 5.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.FH_A4 A4 -5.1.22.RK.LH GTTAACTTACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V154 GT 1331807 5.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.LH_H2 H2 -5.1.22.RK.RH CTCAGCGGGACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V142 GT 1331807 5.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.RH_G2 G2 -5.10.22.RK.RH CGCGCAAGTATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V81 GT 1331807 5.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.10.22.RK.RH_B1 B1 -5.11.22.RK.FH CCTCCGTCATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.FH_B12 B12 -5.11.22.RK.LH AGATGTCCGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V8 GT 1331807 5.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.LH_C12 C12 -5.11.22.RK.RH TACAGCGCATAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V67 GT 1331807 5.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.RH_H11 H11 -5.12.22.RK.FH GTTTGAAACACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V55 GT 1331807 5.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.FH_G11 G11 -5.12.22.RK.LH GTCAGGTGCGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V31 GT 1331807 5.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.LH_E11 E11 -5.12.22.RK.RH TTCCAATACTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V43 GT 1331807 5.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.RH_F11 F11 -5.13.22.RK.FH GGAGAACGACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.FH_B8 B8 -5.13.22.RK.LH GGTAGTTCATAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V63 GT 1331807 5.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.LH_H7 H7 -5.13.22.RK.RH ACCTACTTGTCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.RH_A8 A8 -5.14.22.RK.FH CCTCACTAGCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V15 GT 1331807 5.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.FH_D7 D7 -5.14.22.RK.LH TCCACAGGGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.LH_B7 B7 -5.14.22.RK.RH AGATCGTGCCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.RH_C7 C7 -5.15.22.RK.FH TAGTTCGGTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V27 GT 1331807 5.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.FH_E7 E7 -5.15.22.RK.LH ACTAAAGCAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V39 GT 1331807 5.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.LH_F7 F7 -5.15.22.RK.RH CTTGCTCATAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V51 GT 1331807 5.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.RH_G7 G7 -5.16.22.RK.FH ACGACAACGGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V52 GT 1331807 5.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.FH_G8 G8 -5.16.22.RK.LH TAGGAACTCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V40 GT 1331807 5.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.LH_F8 F8 -5.16.22.RK.RH CGATGAATATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V64 GT 1331807 5.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.RH_H8 H8 -5.17.22.RK.FH TTAATGGATCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V28 GT 1331807 5.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.FH_E8 E8 -5.17.22.RK.LH CTAATCAGAGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V16 GT 1331807 5.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.LH_D8 D8 -5.17.22.RK.RH AATTAATATGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.RH_C8 C8 -5.18.22.RK.FH AGCGCGGCGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V19 GT 1331807 5.18.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.FH_D11 D11 -5.18.22.RK.LH GCAACGAACGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V7 GT 1331807 5.18.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.LH_C11 C11 -5.18.22.RK.RH GTTCTAAGGTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V65 GT 1331807 5.18.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.RH_H9 H9 -5.19.22.RK.FH CTAGCGTGCGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V53 GT 1331807 5.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.FH_G9 G9 -5.19.22.RK.LH CATGTCTTCCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.LH_A11 A11 -5.19.22.RK.RH TAATCCATAATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.RH_B11 B11 -5.2.22.RK.FH TACGGTCTGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V84 GT 1331807 5.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.FH_B4 B4 -5.2.22.RK.LH ACGTATTCGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V96 GT 1331807 5.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.LH_C4 C4 -5.2.22.RK.RH TTACTTATCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V108 GT 1331807 5.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.RH_D4 D4 -5.20.22.RK.FH TCAAGTCCGCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V29 GT 1331807 5.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.FH_E9 E9 -5.20.22.RK.LH CTACTCCACGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V17 GT 1331807 5.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.LH_D9 D9 -5.20.22.RK.RH GTCCGTCCTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V41 GT 1331807 5.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.RH_F9 F9 -5.21.22.RK.FH CCTACCATTGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.FH_B9 B9 -5.21.22.RK.LH ACTGTGACGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.LH_A9 A9 -5.21.22.RK.RH CATTTCGCACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V5 GT 1331807 5.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.RH_C9 C9 -5.22.22.RK.FH GGCGTAACGGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V70 GT 1331807 5.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.FH_A2 A2 -5.22.22.RK.LH GATCTAATCGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V94 GT 1331807 5.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.LH_C2 C2 -5.22.22.RK.RH AATACAGACCTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V82 GT 1331807 5.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.RH_B2 B2 -5.23.22.RK.FH GATGCCTAATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V132 GT 1331807 5.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.FH_F4 F4 -5.23.22.RK.LH AGTTGTAGTCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V120 GT 1331807 5.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.LH_E4 E4 -5.23.22.RK.RH TTAGTTTGTCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V144 GT 1331807 5.23.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.RH_G4 G4 -5.24.22.RK.FH CCGCAGCCGCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V106 GT 1331807 5.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.FH_D2 D2 -5.24.22.RK.LH GAACCGTGCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V118 GT 1331807 5.24.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.LH_E2 E2 -5.24.22.RK.RH ACTAAGTACCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V130 GT 1331807 5.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.RH_F2 F2 -5.27.22.RK.FH ACGGTACCCTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.FH_A6 A6 -5.27.22.RK.LH CGACACGGAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.LH_B6 B6 -5.27.22.RK.RH GCGTTTGCTAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.RH_C6 C6 -5.29.22.RK.FH CGTTCTGGTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V26 GT 1331807 5.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.FH_E6 E6 -5.29.22.RK.LH CCGGCGACAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V14 GT 1331807 5.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.LH_D6 D6 -5.29.22.RK.RH ATCGTAGTGGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V38 GT 1331807 5.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.RH_F6 F6 -5.3.22.RK.FH GTACGTCACTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V133 GT 1331807 5.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.FH_F5 F5 -5.3.22.RK.LH GCCGCCAGGGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V157 GT 1331807 5.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.LH_H5 H5 -5.3.22.RK.RH CCGGCCGCGTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V145 GT 1331807 5.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.RH_G5 G5 -5.30.22.RK.FH TTAAGTTAAGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V61 GT 1331807 5.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.FH_H5 H5 -5.30.22.RK.LH TGCGGCGTCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V49 GT 1331807 5.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.LH_G5 G5 -5.30.22.RK.RH GCATAAACGACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V37 GT 1331807 5.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.RH_F5 F5 -5.31.22.RK.FH CGCTGTGGATTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V50 GT 1331807 5.31.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.FH_G6 G6 -5.31.22.RK.LH AGCCGCGGGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V62 GT 1331807 5.31.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.LH_H6 H6 -5.31.22.RK.RH TGAGTCATTGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.31.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.RH_A7 A7 -5.4.22.RK.FH GACGTTAAGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V97 GT 1331807 5.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.FH_C5 C5 -5.4.22.RK.LH AGGGACTTCAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V121 GT 1331807 5.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.LH_E5 E5 -5.4.22.RK.RH ATGGGACCTTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V109 GT 1331807 5.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.RH_D5 D5 -5.5.22.RK.FH AGGGTGACTTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V156 GT 1331807 5.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.FH_H4 H4 -5.5.22.RK.LH TTGTGTCTCCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V73 GT 1331807 5.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.LH_A5 A5 -5.5.22.RK.RH TTCAGTTCGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V85 GT 1331807 5.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.RH_B5 B5 -5.6.22.RK.FH ACGGCGTTATGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V117 GT 1331807 5.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.FH_E1 E1 -5.6.22.RK.LH AAGGCGCTCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V93 GT 1331807 5.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.LH_C1 C1 -5.6.22.RK.RH CGCAATGAGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V105 GT 1331807 5.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.RH_D1 D1 -5.7.22.RK.FH GCTGCGTATACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V141 GT 1331807 5.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.FH_G1 G1 -5.7.22.RK.LH GAGAAGCTTATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V153 GT 1331807 5.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.LH_H1 H1 -5.7.22.RK.RH CATTTGACGACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V129 GT 1331807 5.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.RH_F1 F1 -5.8.22.RK.FH AACTCAATAGCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V44 GT 1331807 5.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.FH_F12 F12 -5.8.22.RK.LH TTGAACAAGCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V32 GT 1331807 5.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.LH_E12 E12 -5.8.22.RK.RH TAGCAGTTGCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V20 GT 1331807 5.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.RH_D12 D12 -5.9.22.RK.FH ACCTCAGTCAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V56 GT 1331807 5.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.9.22.RK.FH_G12 G12 -5.9.22.RK.LH CCTCGCATGACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V69 GT 1331807 5.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.9.22.RK.LH_A1 A1 -5.9.22.RK.RH AACAGTAAACAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 5.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.9.22.RK.RH_A12 A12 -6.1.22.RK.FH GCATATGCACTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V13 GT 1331807 6.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.FH_D5 D5 -6.1.22.RK.LH GCTGCCCACCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.LH_C5 C5 -6.1.22.RK.RH GTCACTCCGAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V25 GT 1331807 6.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.RH_E5 E5 -6.10.22.RK.FH ACTCTTACTTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.10.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.10.22.RK.FH_H12 H12 -6.10.22.RK.LH TCGTTATTCAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V9 GT 1331807 6.10.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.10.22.RK.LH_D1 D1 -6.10.22.RK.RH TGTCAAAGTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.10.22.RK.RH_G12 G12 -6.11.22.RK.FH GTGCCGGCCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.FH_B2 B2 -6.11.22.RK.LH CTTGGAGGCTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.LH_A2 A2 -6.11.22.RK.RH TCATTAGCGTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V57 GT 1331807 6.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.RH_H1 H1 -6.12.22.RK.FH AGCTCTAGAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.FH_C3 C3 -6.12.22.RK.LH CCTTGACCGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.LH_B3 B3 -6.12.22.RK.RH TATCATATTACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.RH_A3 A3 -6.13.22.RK.FH GAACCAGTACTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.FH_H9 H9 -6.13.22.RK.LH CTTATTAAACGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.LH_G9 G9 -6.13.22.RK.RH GCCTCTACGTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.RH_A10 A10 -6.14.22.RK.FH TTACACAAAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.FH_F9 F9 -6.14.22.RK.LH TGAGACCCTACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.LH_E9 E9 -6.14.22.RK.RH AATCTTGCGCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.RH_D9 D9 -6.15.22.RK.FH AATTCACCTCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.FH_A12 A12 -6.15.22.RK.LH GAGATACAGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.LH_C12 C12 -6.15.22.RK.RH TAATCGGTGCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.RH_B12 B12 -6.16.22.RK.FH AGAGCCAAGAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.FH_F12 F12 -6.16.22.RK.LH CACGCAGTCTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.LH_E12 E12 -6.16.22.RK.RH TATTGCAGCAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.RH_D12 D12 -6.17.22.RK.FH AATAACTAGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.FH_D11 D11 -6.17.22.RK.LH ATTACGTATCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.LH_E11 E11 -6.17.22.RK.RH GAAATCTTGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.RH_C11 C11 -6.18.22.RK.FH CAAGTGAAGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.18.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.FH_B10 B10 -6.18.22.RK.LH CTTGATTCTTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.18.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.LH_C10 C10 -6.18.22.RK.RH AGGATCAGGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.18.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.RH_D10 D10 -6.19.22.RK.FH TATCCAAGCGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.FH_F11 F11 -6.19.22.RK.LH TATTTGATTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.LH_G11 G11 -6.19.22.RK.RH GTGCCATAATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.RH_H11 H11 -6.2.22.RK.FH ACCGAACAATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.FH_A5 A5 -6.2.22.RK.LH CCAACCCAGATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V60 GT 1331807 6.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.LH_H4 H4 -6.2.22.RK.RH TCGAGAGTTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.RH_B5 B5 -6.20.22.RK.FH TCATGGCCTCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V22 GT 1331807 6.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.FH_E2 E2 -6.20.22.RK.LH AGAGGGTGATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.LH_C2 C2 -6.20.22.RK.RH GGATACTCGCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V10 GT 1331807 6.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.RH_D2 D2 -6.21.22.RK.FH ATACATGCAAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.FH_D7 D7 -6.21.22.RK.LH TGATATCGTCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.LH_C7 C7 -6.21.22.RK.RH GGTTGCCCTGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.RH_B7 B7 -6.22.22.RK.FH GGTTCATGAACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.FH_G7 G7 -6.22.22.RK.LH GTTGATACGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.LH_E7 E7 -6.22.22.RK.RH GAAGAGGGTTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.RH_F7 F7 -6.23.22.RK.FH AATGGTTCAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.FH_H8 H8 -6.23.22.RK.LH TAACAATAATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G8 G8 -6.24.22.RK.FH ACGACGCATTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.FH_F10 F10 -6.24.22.RK.RH ACTTGGTGTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.RH_E10 E10 -6.25.22.RK.FH ACTACTGAGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.25.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.FH_A11 A11 -6.25.22.RK.LH CACGTTTATTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.25.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.LH_B11 B11 -6.25.22.RK.RH CGCACCCATACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.25.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.RH_H10 H10 -6.26.22.RK.FH CGGTGACCTACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.FH_C8 C8 -6.26.22.RK.LH CTTAGTGCAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.LH_D8 D8 -6.26.22.RK.RH GTCAACGCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_E8 E8 -6.27.22.RK.FH CATATAGCCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.FH_B8 B8 -6.27.22.RK.LH TGAGTATGAGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.LH_H7 H7 -6.27.22.RK.RH AATTTAGGTAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.RH_A8 A8 -6.28.22.RK.FH TTACTGTGGCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.28.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.FH_G6 G6 -6.28.22.RK.LH TACGGATTATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.28.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.LH_D6 D6 -6.28.22.RK.RH ACATACTGAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.28.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.RH_E6 E6 -6.29.22.RK.FH GCCTATGAGATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.FH_B9 B9 -6.29.22.RK.LH GACTCAACCAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.LH_A9 A9 -6.29.22.RK.RH AATGCGCGTATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.RH_C9 C9 -6.3.22.RK.FH ATGTGCTGCTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V34 GT 1331807 6.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.FH_F2 F2 -6.3.22.RK.LH CGCCGTACTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V58 GT 1331807 6.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.LH_H2 H2 -6.3.22.RK.RH CCACGAGCAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V46 GT 1331807 6.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.RH_G2 G2 -6.30.22.RK.FH TACCGAAGGTAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.FH_H6 H6 -6.30.22.RK.LH TACAATATCTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.LH_A7 A7 -6.30.22.RK.RH CAAACGCACTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.RH_F6 F6 -6.4.22.RK.FH CAGGAACCAGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V36 GT 1331807 6.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.FH_F4 F4 -6.4.22.RK.LH CAAAGGAGCCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V48 GT 1331807 6.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.LH_G4 G4 -6.4.22.RK.RH GTTGGACGAAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V24 GT 1331807 6.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.RH_E4 E4 -6.5.22.RK.FH CAAACTGCGTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.FH_B4 B4 -6.5.22.RK.LH CTGACACGAATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.LH_C4 C4 -6.5.22.RK.RH AGCAGTGCGGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V12 GT 1331807 6.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.RH_D4 D4 -6.6.22.RK.FH GCGTGCCCGGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V47 GT 1331807 6.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.FH_G3 G3 -6.6.22.RK.LH CTATATTATCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.LH_A4 A4 -6.6.22.RK.RH TAAACCTGGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V59 GT 1331807 6.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.RH_H3 H3 -6.7.22.RK.FH CAATCATAGGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V23 GT 1331807 6.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.FH_E3 E3 -6.7.22.RK.LH AATGTTCAACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V11 GT 1331807 6.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.LH_D3 D3 -6.7.22.RK.RH CCGATAAAGGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V35 GT 1331807 6.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.RH_F3 F3 -6.8.22.RK.FH CTACAGGGTCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.FH_A1 A1 -6.8.22.RK.LH TTCGATGCCGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.LH_C1 C1 -6.8.22.RK.RH GTTCATTAAACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 6.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.RH_B1 B1 -6.9.22.RK.FH TCAGACCAACTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V45 GT 1331807 6.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.FH_G1 G1 -6.9.22.RK.LH ATATGTTCTCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V33 GT 1331807 6.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.LH_F1 F1 -6.9.22.RK.RH ACTCTGTAATTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V21 GT 1331807 6.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.RH_E1 E1 -9.1.22.RK.FH AGAATCCACCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V116 GT 1331807 9.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.1.22.RK.FH_D12 D12 -9.1.22.RK.LH TGACAGAATCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V68 GT 1331807 9.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_9.1.22.RK.LH_H12 H12 -9.1.22.RK.RH TCGTTGGGACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V164 GT 1331807 9.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.1.22.RK.RH_H12 H12 -9.10.22.RK.FH AGTGCAGGAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V138 GT 1331807 9.10.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.FH_F10 F10 -9.10.22.RK.LH AGTGTTTCGGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V126 GT 1331807 9.10.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.LH_E10 E10 -9.10.22.RK.RH GTTGCTGAGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V150 GT 1331807 9.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.RH_G10 G10 -9.11.22.RK.FH TTGCCGCTCTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V89 GT 1331807 9.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.FH_B9 B9 -9.11.22.RK.LH CCAGGACAGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V77 GT 1331807 9.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.LH_A9 A9 -9.11.22.RK.RH CCACAACGATCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V101 GT 1331807 9.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.RH_C9 C9 -9.12.22.RK.FH ACACACCCTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V159 GT 1331807 9.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.FH_H7 H7 -9.12.22.RK.LH AGATTCGCTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V88 GT 1331807 9.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.LH_B8 B8 -9.12.22.RK.RH AACTTTCAGGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V76 GT 1331807 9.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.RH_A8 A8 -9.13.22.RK.FH CATAAGGGAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V201 GT 1331807 9.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.FH_D1 D1 -9.13.22.RK.LH TATATAGTATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V189 GT 1331807 9.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.LH_C1 C1 -9.13.22.RK.RH GTGCAACCAATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V213 GT 1331807 9.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.RH_E1 E1 -9.14.22.RK.FH GAGCCATCTGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V103 GT 1331807 9.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.FH_C11 C11 -9.14.22.RK.LH ATTTCCGCTAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V127 GT 1331807 9.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.LH_E11 E11 -9.14.22.RK.RH TTCCACACGTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V115 GT 1331807 9.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.RH_D11 D11 -9.15.22.RK.FH AAGTCACACACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V111 GT 1331807 9.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.FH_D7 D7 -9.15.22.RK.LH CCGAGGTATAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V87 GT 1331807 9.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.LH_B7 B7 -9.15.22.RK.RH TTAACAAGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V99 GT 1331807 9.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.RH_C7 C7 -9.16.22.RK.FH TCGCTACAGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V134 GT 1331807 9.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.FH_F6 F6 -9.16.22.RK.LH CGGCCAGAAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V122 GT 1331807 9.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.LH_E6 E6 -9.16.22.RK.RH TCCGATAATCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V110 GT 1331807 9.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.RH_D6 D6 -9.17.22.RK.FH ATTATGATTATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V146 GT 1331807 9.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.FH_G6 G6 -9.17.22.RK.LH AACCACTAACCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V75 GT 1331807 9.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.LH_A7 A7 -9.17.22.RK.RH GCCACCGCCGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V158 GT 1331807 9.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.RH_H6 H6 -9.19.22.RK.FH CAATGTAGACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V74 GT 1331807 9.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.FH_A6 A6 -9.19.22.RK.LH CCGCGTCTCAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V86 GT 1331807 9.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.LH_B6 B6 -9.19.22.RK.RH TGGTGGAGTTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V98 GT 1331807 9.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.RH_C6 C6 -9.2.22.RK.FH GCCTACTCTCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V251 GT 1331807 9.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.FH_H3 H3 -9.2.22.RK.LH CTCCGAACAACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V168 GT 1331807 9.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.LH_A4 A4 -9.2.22.RK.RH CCACTGCCCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V180 GT 1331807 9.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.RH_B4 B4 -9.20.22.RK.FH ACACCGCACAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V151 GT 1331807 9.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.FH_G11 G11 -9.20.22.RK.LH CAGCCCTACCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V163 GT 1331807 9.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK,LH_H11 H11 -9.20.22.RK.RH GTACTCGAACCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V139 GT 1331807 9.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.RH_F11 F11 -9.21.22.RK.FH ATAGTCCTTTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V136 GT 1331807 9.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.FH_F8 F8 -9.21.22.RK.LH TATAGGCTCCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V160 GT 1331807 9.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.LH_H8 H8 -9.21.22.RK.RH TCTTATAACGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V148 GT 1331807 9.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.RH_G8 G8 -9.22.22.RK.FH CCGGCTTATGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V135 GT 1331807 9.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.FH_F7 F7 -9.22.22.RK.LH CGAATACTGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V147 GT 1331807 9.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.LH_G7 G7 -9.22.22.RK.RH TGGCAGCGAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V123 GT 1331807 9.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.RH_E7 E7 -9.23.22.RK.FH GAAGTAGCGAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V112 GT 1331807 9.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.FH_D8 D8 -9.23.22.RK.LH GTGAATGTTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V124 GT 1331807 9.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.LH_E8 E8 -9.23.22.RK.RH AACCGCATAAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V100 GT 1331807 9.23.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.RH_C8 C8 -9.24.22.RK.FH GATATACCAGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V104 GT 1331807 9.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.FH_C12 C12 -9.24.22.RK.LH CTATCTCCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V92 GT 1331807 9.24.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.LH_B12 B12 -9.24.22.RK.RH TCCGCCTAGTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V80 GT 1331807 9.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.RH_A12 A12 -9.25.22.RK.FH ATAGGAATAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V140 GT 1331807 9.25.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.25.22.RK.FH_F12 F12 -9.25.22.RK.LH CAAACCTATGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V128 GT 1331807 9.25.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.25.22.RK.LH_E12 E12 -9.26.22.RK.FH GTGTCGAGGGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V114 GT 1331807 9.26.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.FH_D10 D10 -9.26.22.RK.LH AGTTCTCATTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V102 GT 1331807 9.26.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.LH_C10 C10 -9.26.22.RK.RH AGACTTCTCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V90 GT 1331807 9.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.RH_B10 B10 -9.27.22.RK.FH GCGCGGCGTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V78 GT 1331807 9.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.FH_A10 A10 -9.27.22.RK.LH ATAATTGCCGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V161 GT 1331807 9.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.LH_H9 H9 -9.27.22.RK.RH TAAGGTCGATAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V149 GT 1331807 9.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.RH_G9 G9 -9.29.22.RK.FH CTAGAGCTCCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V249 GT 1331807 9.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.FH_H1 H1 -9.29.22.RK.LH TACTGTACTGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V237 GT 1331807 9.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.LH_G1 G1 -9.29.22.RK.RH CTCACCTAGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V225 GT 1331807 9.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.RH_F1 F1 -9.3.22.RK.FH ACAGTTGTACGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V203 GT 1331807 9.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.FH_D3 D3 -9.3.22.RK.LH ATTTACAATTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V179 GT 1331807 9.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.LH_B3 B3 -9.3.22.RK.RH GTCACGGACATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V191 GT 1331807 9.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.RH_C3 C3 -9.30.22.RK.FH GTTTGGCCACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V177 GT 1331807 9.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.30.22.RK.FH_B1 B1 -9.30.22.RK.LH CACAACCACAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V152 GT 1331807 9.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.30.22.RK.LH_G12 G12 -9.30.22.RK.RH TAGGACGGGAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V165 GT 1331807 9.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.30.22.RK.RH_A1 A1 -9.4.22.RK.FH TTGCACCGTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V167 GT 1331807 9.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.FH_A3 A3 -9.4.22.RK.LH GGTCTTAGCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V250 GT 1331807 9.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.LH_H2 H2 -9.4.22.RK.RH TCTCGCACTGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V238 GT 1331807 9.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.RH_G2 G2 -9.5.22.RK.FH ACCCAAGCGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V214 GT 1331807 9.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.FH_E2 E2 -9.5.22.RK.LH AGATGCAATGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V226 GT 1331807 9.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.LH_F2 F2 -9.5.22.RK.RH CAGGCCACTCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V202 GT 1331807 9.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.RH_D2 D2 -9.6.22.RK.FH TCTTGCGGAGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V91 GT 1331807 9.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.FH_B11 B11 -9.6.22.RK.LH CGGAGAGACATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V162 GT 1331807 9.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.LH_H10 H10 -9.6.22.RK.RH GTCGCTTGCACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V79 GT 1331807 9.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.RH_A11 A11 -9.7.22.RK.FH TATGTTGACGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V125 GT 1331807 9.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.FH_E9 E9 -9.7.22.RK.LH TCGAGCCGATCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V137 GT 1331807 9.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.LH_F9 F9 -9.7.22.RK.RH CACCATCTCCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V113 GT 1331807 9.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.RH_D9 D9 -9.8.22.RK.FH ACTGGCAAACCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V215 GT 1331807 9.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.FH_E3 E3 -9.8.22.RK.LH ACCAGTGACTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V239 GT 1331807 9.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.LH_G3 G3 -9.8.22.RK.RH GCATTCGGCGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V227 GT 1331807 9.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.RH_F3 F3 -9.9.22.RK.FH GTCCTACACAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V178 GT 1331807 9.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.FH_B2 B2 -9.9.22.RK.LH AAGTCTTATCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V166 GT 1331807 9.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.LH_A2 A2 -9.9.22.RK.RH ACTGTTTACTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V190 GT 1331807 9.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.RH_C2 C2 -BLANK.242.4C GAATATACCTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V192 GT 1331807 BLANK.242.4C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK.242.4C_C4 C4 -BLANK238.3A AGCCCTGCTACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3A_A3 A3 -BLANK238.3B ACTCGCTCGCTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3B_B3 B3 -BLANK238.3C CTGTCTATACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3C_C3 C3 -BLANK238.3D TAATCTCGCCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3D_D3 D3 -BLANK238.3E AGTAAAGATCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3E_E3 E3 -BLANK238.3F TTGCTGGACGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3F_F3 F3 -BLANK238.3G TTGCGGACCCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3G_G3 G3 -BLANK238.3H CGGTATAGCAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK238.3H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3H_H3 H3 -BLANK239.10A CTCTGAGGTAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK239.10A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10A_A10 A10 -BLANK239.10B TCCGGCGGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT 1331807 BLANK239.10B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10B_B10 B10 -BLANK239.10C ACATGATATTCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V6 GT 1331807 BLANK239.10C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10C_C10 C10 -BLANK239.10D TAAGGCATCGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V18 GT 1331807 BLANK239.10D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10D_D10 D10 -BLANK239.10E CACACAAAGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V30 GT 1331807 BLANK239.10E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10E_E10 E10 -BLANK239.10F CGAGGCGAGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V42 GT 1331807 BLANK239.10F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10F_F10 F10 -BLANK239.10G TAGTCTAAGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V54 GT 1331807 BLANK239.10G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10G_G10 G10 -BLANK239.10H ATGACTAAGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V66 GT 1331807 BLANK239.10H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10H_H10 H10 -BLANK240.3A GCGAGGAAGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V71 GT 1331807 BLANK240.3A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3A_A3 A3 -BLANK240.3B GGACAAGTGCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V83 GT 1331807 BLANK240.3B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3B_B3 B3 -BLANK240.3C CTGATGTACACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V95 GT 1331807 BLANK240.3C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3C_C3 C3 -BLANK240.3D TGGAGCCTTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V107 GT 1331807 BLANK240.3D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3D_D3 D3 -BLANK240.3E ACGTGCCTTAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V119 GT 1331807 BLANK240.3E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3E_E3 E3 -BLANK240.3F CACCCTTGCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V131 GT 1331807 BLANK240.3F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3F_F3 F3 -BLANK240.3G ATGCCTCGTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V143 GT 1331807 BLANK240.3G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3G_G3 G3 -BLANK240.3H GTTGTTCTGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V155 GT 1331807 BLANK240.3H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3H_H3 H3 -BLANK242.10A TGCTACAGACGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V174 GT 1331807 BLANK242.10A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10A_A10 A10 -BLANK242.10B GATCCCACGTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V186 GT 1331807 BLANK242.10B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10B_B10 B10 -BLANK242.10C CGCTAGGATGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V198 GT 1331807 BLANK242.10C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10C_C10 C10 -BLANK242.10D CTACTTACATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V210 GT 1331807 BLANK242.10D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10D_D10 D10 -BLANK242.10E ACCACCGTAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V222 GT 1331807 BLANK242.10E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10E_E10 E10 -BLANK242.10F CGGTTGGCGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V234 GT 1331807 BLANK242.10F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10F_F10 F10 -BLANK242.10G CCACCGGGCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V246 GT 1331807 BLANK242.10G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10G_G10 G10 -BLANK242.10H TATGTGCCGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V258 GT 1331807 BLANK242.10H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10H_H10 H10 -BLANK242.11A AGGTGAGTTCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V175 GT 1331807 BLANK242.11A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11A_A11 A11 -BLANK242.11B CCGCCAGCTTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V187 GT 1331807 BLANK242.11B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11B_B11 B11 -BLANK242.11C AGCGGTAGCGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V199 GT 1331807 BLANK242.11C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11C_C11 C11 -BLANK242.11D CGCACGTACCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V211 GT 1331807 BLANK242.11D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11D_D11 D11 -BLANK242.11E AGGAAGTAACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V223 GT 1331807 BLANK242.11E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11E_E11 E11 -BLANK242.11F CGATTCCTTAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V235 GT 1331807 BLANK242.11F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11F_F11 F11 -BLANK242.11G AATCCGGTCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V247 GT 1331807 BLANK242.11G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11G_G11 G11 -BLANK242.11H ATACCGTCTTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V259 GT 1331807 BLANK242.11H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11H_H11 H11 -BLANK242.12A AACGATCATAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V176 GT 1331807 BLANK242.12A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12A_A12 A12 -BLANK242.12B TCATCTTGATTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V188 GT 1331807 BLANK242.12B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12B_B12 B12 -BLANK242.12C GTCAGTATGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V200 GT 1331807 BLANK242.12C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12C_C12 C12 -BLANK242.12D GTCCTCGCGACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V212 GT 1331807 BLANK242.12D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12D_D12 D12 -BLANK242.12E CGTTCGCTAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V224 GT 1331807 BLANK242.12E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12E_E12 E12 -BLANK242.12F TGCCTGCTCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V236 GT 1331807 BLANK242.12F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12F_F12 F12 -BLANK242.12G TCTTACCCATAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V248 GT 1331807 BLANK242.12G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12G_G12 G12 -BLANK242.12H TGTGCTTGTAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V260 GT 1331807 BLANK242.12H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12H_H12 H12 -BLANK242.4D ACCAGAAATGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V204 GT 1331807 BLANK242.4D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4D_D4 D4 -BLANK242.4E AACACCATCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V216 GT 1331807 BLANK242.4E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4E_E4 E4 -BLANK242.4F TCTACATACATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V228 GT 1331807 BLANK242.4F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4F_F4 F4 -BLANK242.4G TGGCGCACGGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V240 GT 1331807 BLANK242.4G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4G_G4 G4 -BLANK242.4H ACTGCCCGATAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V252 GT 1331807 BLANK242.4H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4H_H4 H4 -BLANK242.5A TCTGGCTACGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V169 GT 1331807 BLANK242.5A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5A_A5 A5 -BLANK242.5B ATAGTTAGGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V181 GT 1331807 BLANK242.5B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5B_B5 B5 -BLANK242.5C GAATCTGACAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V193 GT 1331807 BLANK242.5C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5C_C5 C5 -BLANK242.5D CTCATCATGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V205 GT 1331807 BLANK242.5D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5D_D5 D5 -BLANK242.5E TTATCCAGTCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V217 GT 1331807 BLANK242.5E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5E_E5 E5 -BLANK242.5F GAGTCTTGGTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V229 GT 1331807 BLANK242.5F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5F_F5 F5 -BLANK242.5G CATTTACATCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V241 GT 1331807 BLANK242.5G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5G_G5 G5 -BLANK242.5H TTCTTAACGCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V253 GT 1331807 BLANK242.5H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5H_H5 H5 -BLANK242.6A AGTAGTTTCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V170 GT 1331807 BLANK242.6A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6A_A6 A6 -BLANK242.6B GACCCGTTTCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V182 GT 1331807 BLANK242.6B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6B_B6 B6 -BLANK242.6C ATTGCCTTGATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V194 GT 1331807 BLANK242.6C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6C_C6 C6 -BLANK242.6D TTAGGATTCTAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V206 GT 1331807 BLANK242.6D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6D_D6 D6 -BLANK242.6E GTTTATCTTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V218 GT 1331807 BLANK242.6E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6E_E6 E6 -BLANK242.6F CAGTCTAGTACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V230 GT 1331807 BLANK242.6F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6F_F6 F6 -BLANK242.6G GTGGGACTGCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V242 GT 1331807 BLANK242.6G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6G_G6 G6 -BLANK242.6H CTCCCGAGCTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V254 GT 1331807 BLANK242.6H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6H_H6 H6 -BLANK242.7A CAGATCCCAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V171 GT 1331807 BLANK242.7A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7A_A7 A7 -BLANK242.7B TGACTGCGTTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V183 GT 1331807 BLANK242.7B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7B_B7 B7 -BLANK242.7C GAGCCCAAAGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V195 GT 1331807 BLANK242.7C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7C_C7 C7 -BLANK242.7D CAACGAACCATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V207 GT 1331807 BLANK242.7D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7D_D7 D7 -BLANK242.7E GTTCGCCGCATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V219 GT 1331807 BLANK242.7E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7E_E7 E7 -BLANK242.7F GTTCGAGTGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V231 GT 1331807 BLANK242.7F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7F_F7 F7 -BLANK242.7G CGGCCTAAGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V243 GT 1331807 BLANK242.7G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7G_G7 G7 -BLANK242.7H TAGACTTCAGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V255 GT 1331807 BLANK242.7H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7H_H7 H7 -BLANK242.8A GATAGCACTCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V172 GT 1331807 BLANK242.8A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8A_A8 A8 -BLANK242.8B ACGTTAATATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V184 GT 1331807 BLANK242.8B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8B_B8 B8 -BLANK242.8C CCATGTGGCTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V196 GT 1331807 BLANK242.8C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8C_C8 C8 -BLANK242.8D ACACGTTTGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V208 GT 1331807 BLANK242.8D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8D_D8 D8 -BLANK242.8E AGACTATTTCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V220 GT 1331807 BLANK242.8E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8E_E8 E8 -BLANK242.8F AGTCCGAGTTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V232 GT 1331807 BLANK242.8F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8F_F8 F8 -BLANK242.8G GCTGAGCCTTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V244 GT 1331807 BLANK242.8G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8G_G8 G8 -BLANK242.8H ACTTAGACTCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V256 GT 1331807 BLANK242.8H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8H_H8 H8 -BLANK242.9A GTAATTGTAATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V173 GT 1331807 BLANK242.9A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9A_A9 A9 -BLANK242.9B TCTAACGAGTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V185 GT 1331807 BLANK242.9B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9B_B9 B9 -BLANK242.9C CGTTCCTTGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V197 GT 1331807 BLANK242.9C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9C_C9 C9 -BLANK242.9D CGTCGCAGCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V209 GT 1331807 BLANK242.9D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9D_D9 D9 -BLANK242.9E AGCGATTCCTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V221 GT 1331807 BLANK242.9E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9E_E9 E9 -BLANK242.9F CGTGAGGACCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V233 GT 1331807 BLANK242.9F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9F_F9 F9 -BLANK242.9G AGAGACGCGTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V245 GT 1331807 BLANK242.9G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9G_G9 G9 -BLANK242.9H GGACCTGGATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V257 GT 1331807 BLANK242.9H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9H_H9 H9 +11.1.21.RK.FH TATGCCAGAGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.1.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.FH_C4 C4 +11.1.21.RK.LH ATCTAGTGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.1.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.LH_D4 D4 +11.1.21.RK.RH TTCCTTAGTAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.1.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.1.21.RK.RH_B4 B4 +11.10.21.RK.FH GTGGAGTCTCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.10.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.FH_D1 D1 +11.10.21.RK.LH TGATGTGCTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.10.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.LH_E1 E1 +11.10.21.RK.RH TGACTAATGGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.10.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.10.21.RK.RH_C1 C1 +11.12.21.RK.FH GTAGTAGACCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.12.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.FH_E2 E2 +11.12.21.RK.LH CCGGACAAGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.12.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.LH_F2 F2 +11.12.21.RK.RH ACCTTACACCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.12.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.12.21.RK.RH_D2 D2 +11.13.21.RK.FH CGCGCCTTAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.13.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.FH_A5 A5 +11.13.21.RK.LH CGTCCGTATGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.13.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.LH_B5 B5 +11.13.21.RK.RH GACTCTGCTCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.13.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.13.21.RK.RH_H4 H4 +11.17.21.RK.FH TCCATACCGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.17.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.FH_A2 A2 +11.17.21.RK.LH ATGCTGCAACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.17.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.LH_B2 B2 +11.17.21.RK.RH CGGGACACCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.17.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.17.21.RK.RH_C2 C2 +11.2.21.RK.FH TGTGCACGCCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.2.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.FH_F1 F1 +11.2.21.RK.LH CTATGTATTAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.2.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.LH_H1 H1 +11.2.21.RK.RH GGTGAGCAAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.2.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.2.21.RK.RH_G1 G1 +11.3.21.RK.FH TAAATATACCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.3.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.FH_G2 G2 +11.3.21.RK.LH ACTCCCGTGTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.3.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.LH_H2 H2 +11.3.21.RK.RH CCTAACGGTCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.3.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.3.21.RK.RH_A4 A4 +11.4.21.RK.FH CTCGCCCTCGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.4.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.FH_E4 E4 +11.4.21.RK.LH TACTAACGCGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.4.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.LH_F4 F4 +11.4.21.RK.RH GTCGTCCAAATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.4.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.4.21.RK.RH_G4 G4 +11.5.21.RK.FH GTCATGCTCCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.5.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.FH_H5 H5 +11.5.21.RK.LH GCGATCACACCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.5.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.LH_F5 F5 +11.5.21.RK.RH TGCACAGTCGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.5.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.5.21.RK.RH_G5 G5 +11.6.21.RK.FH TATGGTACCCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.6.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.FH_A6 A6 +11.6.21.RK.LH ACGTGAGGAACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.6.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.LH_B6 B6 +11.6.21.RK.RH AAGAACTCATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.6.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.6.21.RK.RH_C6 C6 +11.7.21.RK.FH ACGCTTAACGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.7.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.FH_D5 D5 +11.7.21.RK.LH CGTTTGGAATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.7.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.LH_C5 C5 +11.7.21.RK.RH TCTCTTTCGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.7.21.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.7.21.RK.RH_E5 E5 +11.8.21.RK.FH AGCCTTCGTCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.8.21.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.8.21.RK.FH_A1 A1 +11.8.21.RK.LH CGTATAAATGCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 11.8.21.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_11.8.21.RK.LH_B1 B1 +5.1.22.RK.FH CAAATTCGGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V72" GT 1331807 5.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.FH_A4 A4 +5.1.22.RK.LH GTTAACTTACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V154" GT 1331807 5.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.LH_H2 H2 +5.1.22.RK.RH CTCAGCGGGACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V142" GT 1331807 5.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.1.22.RK.RH_G2 G2 +5.10.22.RK.RH CGCGCAAGTATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V81" GT 1331807 5.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.10.22.RK.RH_B1 B1 +5.11.22.RK.FH CCTCCGTCATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.FH_B12 B12 +5.11.22.RK.LH AGATGTCCGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V8" GT 1331807 5.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.LH_C12 C12 +5.11.22.RK.RH TACAGCGCATAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V67" GT 1331807 5.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.11.22.RK.RH_H11 H11 +5.12.22.RK.FH GTTTGAAACACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V55" GT 1331807 5.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.FH_G11 G11 +5.12.22.RK.LH GTCAGGTGCGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V31" GT 1331807 5.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.LH_E11 E11 +5.12.22.RK.RH TTCCAATACTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V43" GT 1331807 5.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.12.22.RK.RH_F11 F11 +5.13.22.RK.FH GGAGAACGACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.FH_B8 B8 +5.13.22.RK.LH GGTAGTTCATAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V63" GT 1331807 5.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.LH_H7 H7 +5.13.22.RK.RH ACCTACTTGTCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.13.22.RK.RH_A8 A8 +5.14.22.RK.FH CCTCACTAGCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V15" GT 1331807 5.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.FH_D7 D7 +5.14.22.RK.LH TCCACAGGGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.LH_B7 B7 +5.14.22.RK.RH AGATCGTGCCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.14.22.RK.RH_C7 C7 +5.15.22.RK.FH TAGTTCGGTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V27" GT 1331807 5.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.FH_E7 E7 +5.15.22.RK.LH ACTAAAGCAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V39" GT 1331807 5.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.LH_F7 F7 +5.15.22.RK.RH CTTGCTCATAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V51" GT 1331807 5.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.15.22.RK.RH_G7 G7 +5.16.22.RK.FH ACGACAACGGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V52" GT 1331807 5.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.FH_G8 G8 +5.16.22.RK.LH TAGGAACTCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V40" GT 1331807 5.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.LH_F8 F8 +5.16.22.RK.RH CGATGAATATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V64" GT 1331807 5.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.16.22.RK.RH_H8 H8 +5.17.22.RK.FH TTAATGGATCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V28" GT 1331807 5.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.FH_E8 E8 +5.17.22.RK.LH CTAATCAGAGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V16" GT 1331807 5.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.LH_D8 D8 +5.17.22.RK.RH AATTAATATGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.17.22.RK.RH_C8 C8 +5.18.22.RK.FH AGCGCGGCGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V19" GT 1331807 5.18.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.FH_D11 D11 +5.18.22.RK.LH GCAACGAACGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V7" GT 1331807 5.18.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.LH_C11 C11 +5.18.22.RK.RH GTTCTAAGGTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V65" GT 1331807 5.18.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.18.22.RK.RH_H9 H9 +5.19.22.RK.FH CTAGCGTGCGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V53" GT 1331807 5.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.FH_G9 G9 +5.19.22.RK.LH CATGTCTTCCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.LH_A11 A11 +5.19.22.RK.RH TAATCCATAATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.19.22.RK.RH_B11 B11 +5.2.22.RK.FH TACGGTCTGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V84" GT 1331807 5.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.FH_B4 B4 +5.2.22.RK.LH ACGTATTCGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V96" GT 1331807 5.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.LH_C4 C4 +5.2.22.RK.RH TTACTTATCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V108" GT 1331807 5.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.2.22.RK.RH_D4 D4 +5.20.22.RK.FH TCAAGTCCGCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V29" GT 1331807 5.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.FH_E9 E9 +5.20.22.RK.LH CTACTCCACGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V17" GT 1331807 5.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.LH_D9 D9 +5.20.22.RK.RH GTCCGTCCTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V41" GT 1331807 5.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.20.22.RK.RH_F9 F9 +5.21.22.RK.FH CCTACCATTGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.FH_B9 B9 +5.21.22.RK.LH ACTGTGACGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.LH_A9 A9 +5.21.22.RK.RH CATTTCGCACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V5" GT 1331807 5.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.21.22.RK.RH_C9 C9 +5.22.22.RK.FH GGCGTAACGGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V70" GT 1331807 5.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.FH_A2 A2 +5.22.22.RK.LH GATCTAATCGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V94" GT 1331807 5.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.LH_C2 C2 +5.22.22.RK.RH AATACAGACCTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V82" GT 1331807 5.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.22.22.RK.RH_B2 B2 +5.23.22.RK.FH GATGCCTAATGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V132" GT 1331807 5.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.FH_F4 F4 +5.23.22.RK.LH AGTTGTAGTCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V120" GT 1331807 5.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.LH_E4 E4 +5.23.22.RK.RH TTAGTTTGTCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V144" GT 1331807 5.23.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.23.22.RK.RH_G4 G4 +5.24.22.RK.FH CCGCAGCCGCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V106" GT 1331807 5.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.FH_D2 D2 +5.24.22.RK.LH GAACCGTGCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V118" GT 1331807 5.24.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.LH_E2 E2 +5.24.22.RK.RH ACTAAGTACCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V130" GT 1331807 5.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.24.22.RK.RH_F2 F2 +5.27.22.RK.FH ACGGTACCCTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.FH_A6 A6 +5.27.22.RK.LH CGACACGGAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.LH_B6 B6 +5.27.22.RK.RH GCGTTTGCTAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.27.22.RK.RH_C6 C6 +5.29.22.RK.FH CGTTCTGGTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V26" GT 1331807 5.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.FH_E6 E6 +5.29.22.RK.LH CCGGCGACAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V14" GT 1331807 5.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.LH_D6 D6 +5.29.22.RK.RH ATCGTAGTGGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V38" GT 1331807 5.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.29.22.RK.RH_F6 F6 +5.3.22.RK.FH GTACGTCACTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V133" GT 1331807 5.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.FH_F5 F5 +5.3.22.RK.LH GCCGCCAGGGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V157" GT 1331807 5.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.LH_H5 H5 +5.3.22.RK.RH CCGGCCGCGTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V145" GT 1331807 5.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.3.22.RK.RH_G5 G5 +5.30.22.RK.FH TTAAGTTAAGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V61" GT 1331807 5.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.FH_H5 H5 +5.30.22.RK.LH TGCGGCGTCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V49" GT 1331807 5.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.LH_G5 G5 +5.30.22.RK.RH GCATAAACGACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V37" GT 1331807 5.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.30.22.RK.RH_F5 F5 +5.31.22.RK.FH CGCTGTGGATTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V50" GT 1331807 5.31.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.FH_G6 G6 +5.31.22.RK.LH AGCCGCGGGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V62" GT 1331807 5.31.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.LH_H6 H6 +5.31.22.RK.RH TGAGTCATTGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.31.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.31.22.RK.RH_A7 A7 +5.4.22.RK.FH GACGTTAAGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V97" GT 1331807 5.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.FH_C5 C5 +5.4.22.RK.LH AGGGACTTCAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V121" GT 1331807 5.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.LH_E5 E5 +5.4.22.RK.RH ATGGGACCTTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V109" GT 1331807 5.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.4.22.RK.RH_D5 D5 +5.5.22.RK.FH AGGGTGACTTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V156" GT 1331807 5.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.FH_H4 H4 +5.5.22.RK.LH TTGTGTCTCCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V73" GT 1331807 5.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.LH_A5 A5 +5.5.22.RK.RH TTCAGTTCGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V85" GT 1331807 5.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.5.22.RK.RH_B5 B5 +5.6.22.RK.FH ACGGCGTTATGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V117" GT 1331807 5.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.FH_E1 E1 +5.6.22.RK.LH AAGGCGCTCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V93" GT 1331807 5.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.LH_C1 C1 +5.6.22.RK.RH CGCAATGAGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V105" GT 1331807 5.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.6.22.RK.RH_D1 D1 +5.7.22.RK.FH GCTGCGTATACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V141" GT 1331807 5.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.FH_G1 G1 +5.7.22.RK.LH GAGAAGCTTATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V153" GT 1331807 5.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.LH_H1 H1 +5.7.22.RK.RH CATTTGACGACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V129" GT 1331807 5.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.7.22.RK.RH_F1 F1 +5.8.22.RK.FH AACTCAATAGCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V44" GT 1331807 5.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.FH_F12 F12 +5.8.22.RK.LH TTGAACAAGCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V32" GT 1331807 5.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.LH_E12 E12 +5.8.22.RK.RH TAGCAGTTGCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V20" GT 1331807 5.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.8.22.RK.RH_D12 D12 +5.9.22.RK.FH ACCTCAGTCAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V56" GT 1331807 5.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.9.22.RK.FH_G12 G12 +5.9.22.RK.LH CCTCGCATGACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V69" GT 1331807 5.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_5.9.22.RK.LH_A1 A1 +5.9.22.RK.RH AACAGTAAACAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 5.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_5.9.22.RK.RH_A12 A12 +6.1.22.RK.FH GCATATGCACTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V13" GT 1331807 6.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.FH_D5 D5 +6.1.22.RK.LH GCTGCCCACCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.LH_C5 C5 +6.1.22.RK.RH GTCACTCCGAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V25" GT 1331807 6.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.1.22.RK.RH_E5 E5 +6.10.22.RK.FH ACTCTTACTTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.10.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.10.22.RK.FH_H12 H12 +6.10.22.RK.LH TCGTTATTCAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V9" GT 1331807 6.10.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.10.22.RK.LH_D1 D1 +6.10.22.RK.RH TGTCAAAGTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.10.22.RK.RH_G12 G12 +6.11.22.RK.FH GTGCCGGCCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.FH_B2 B2 +6.11.22.RK.LH CTTGGAGGCTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.LH_A2 A2 +6.11.22.RK.RH TCATTAGCGTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V57" GT 1331807 6.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.11.22.RK.RH_H1 H1 +6.12.22.RK.FH AGCTCTAGAAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.FH_C3 C3 +6.12.22.RK.LH CCTTGACCGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.LH_B3 B3 +6.12.22.RK.RH TATCATATTACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.12.22.RK.RH_A3 A3 +6.13.22.RK.FH GAACCAGTACTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.FH_H9 H9 +6.13.22.RK.LH CTTATTAAACGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.LH_G9 G9 +6.13.22.RK.RH GCCTCTACGTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.13.22.RK.RH_A10 A10 +6.14.22.RK.FH TTACACAAAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.FH_F9 F9 +6.14.22.RK.LH TGAGACCCTACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.LH_E9 E9 +6.14.22.RK.RH AATCTTGCGCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.14.22.RK.RH_D9 D9 +6.15.22.RK.FH AATTCACCTCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.FH_A12 A12 +6.15.22.RK.LH GAGATACAGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.LH_C12 C12 +6.15.22.RK.RH TAATCGGTGCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.15.22.RK.RH_B12 B12 +6.16.22.RK.FH AGAGCCAAGAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.FH_F12 F12 +6.16.22.RK.LH CACGCAGTCTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.LH_E12 E12 +6.16.22.RK.RH TATTGCAGCAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.16.22.RK.RH_D12 D12 +6.17.22.RK.FH AATAACTAGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.FH_D11 D11 +6.17.22.RK.LH ATTACGTATCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.LH_E11 E11 +6.17.22.RK.RH GAAATCTTGAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.17.22.RK.RH_C11 C11 +6.18.22.RK.FH CAAGTGAAGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.18.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.FH_B10 B10 +6.18.22.RK.LH CTTGATTCTTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.18.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.LH_C10 C10 +6.18.22.RK.RH AGGATCAGGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.18.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.18.22.RK.RH_D10 D10 +6.19.22.RK.FH TATCCAAGCGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.FH_F11 F11 +6.19.22.RK.LH TATTTGATTGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.LH_G11 G11 +6.19.22.RK.RH GTGCCATAATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.19.22.RK.RH_H11 H11 +6.2.22.RK.FH ACCGAACAATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.FH_A5 A5 +6.2.22.RK.LH CCAACCCAGATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V60" GT 1331807 6.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.LH_H4 H4 +6.2.22.RK.RH TCGAGAGTTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.2.22.RK.RH_B5 B5 +6.20.22.RK.FH TCATGGCCTCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V22" GT 1331807 6.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.FH_E2 E2 +6.20.22.RK.LH AGAGGGTGATCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.LH_C2 C2 +6.20.22.RK.RH GGATACTCGCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V10" GT 1331807 6.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.20.22.RK.RH_D2 D2 +6.21.22.RK.FH ATACATGCAAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.FH_D7 D7 +6.21.22.RK.LH TGATATCGTCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.LH_C7 C7 +6.21.22.RK.RH GGTTGCCCTGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.21.22.RK.RH_B7 B7 +6.22.22.RK.FH GGTTCATGAACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.FH_G7 G7 +6.22.22.RK.LH GTTGATACGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.LH_E7 E7 +6.22.22.RK.RH GAAGAGGGTTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.22.22.RK.RH_F7 F7 +6.23.22.RK.FH AATGGTTCAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.FH_H8 H8 +6.23.22.RK.LH.A TAACAATAATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.23.22.RK.LH.A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G8 G8 +6.23.22.RK.LH.B GCTCGAAGATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.23.22.RK.LH.B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.23.22.RK.LH_G10 G10 +6.24.22.RK.FH ACGACGCATTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.FH_F10 F10 +6.24.22.RK.RH ACTTGGTGTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.24.22.RK.RH_E10 E10 +6.25.22.RK.FH ACTACTGAGGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.25.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.FH_A11 A11 +6.25.22.RK.LH CACGTTTATTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.25.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.LH_B11 B11 +6.25.22.RK.RH CGCACCCATACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.25.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.25.22.RK.RH_H10 H10 +6.26.22.RK.FH CGGTGACCTACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.26.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.FH_C8 C8 +6.26.22.RK.LH CTTAGTGCAGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.26.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.LH_D8 D8 +6.26.22.RK.RH.A GTCAACGCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.26.22.RK.RH.A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_E8 E8 +6.26.22.RK.RH.B TGAGTGGTCTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.26.22.RK.RH.B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.26.22.RK.RH_F8 F8 +6.27.22.RK.FH CATATAGCCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.FH_B8 B8 +6.27.22.RK.LH TGAGTATGAGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.LH_H7 H7 +6.27.22.RK.RH AATTTAGGTAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.27.22.RK.RH_A8 A8 +6.28.22.RK.FH TTACTGTGGCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.28.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.FH_G6 G6 +6.28.22.RK.LH TACGGATTATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.28.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.LH_D6 D6 +6.28.22.RK.RH ACATACTGAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.28.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.28.22.RK.RH_E6 E6 +6.29.22.RK.FH GCCTATGAGATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.FH_B9 B9 +6.29.22.RK.LH GACTCAACCAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.LH_A9 A9 +6.29.22.RK.RH AATGCGCGTATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.29.22.RK.RH_C9 C9 +6.3.22.RK.FH ATGTGCTGCTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V34" GT 1331807 6.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.FH_F2 F2 +6.3.22.RK.LH CGCCGTACTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V58" GT 1331807 6.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.LH_H2 H2 +6.3.22.RK.RH CCACGAGCAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V46" GT 1331807 6.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.3.22.RK.RH_G2 G2 +6.30.22.RK.FH TACCGAAGGTAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.FH_H6 H6 +6.30.22.RK.LH TACAATATCTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.LH_A7 A7 +6.30.22.RK.RH CAAACGCACTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_6.30.22.RK.RH_F6 F6 +6.4.22.RK.FH CAGGAACCAGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V36" GT 1331807 6.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.FH_F4 F4 +6.4.22.RK.LH CAAAGGAGCCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V48" GT 1331807 6.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.LH_G4 G4 +6.4.22.RK.RH GTTGGACGAAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V24" GT 1331807 6.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.4.22.RK.RH_E4 E4 +6.5.22.RK.FH CAAACTGCGTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.FH_B4 B4 +6.5.22.RK.LH CTGACACGAATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.LH_C4 C4 +6.5.22.RK.RH AGCAGTGCGGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V12" GT 1331807 6.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.5.22.RK.RH_D4 D4 +6.6.22.RK.FH GCGTGCCCGGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V47" GT 1331807 6.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.FH_G3 G3 +6.6.22.RK.LH CTATATTATCCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.LH_A4 A4 +6.6.22.RK.RH TAAACCTGGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V59" GT 1331807 6.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.6.22.RK.RH_H3 H3 +6.7.22.RK.FH CAATCATAGGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V23" GT 1331807 6.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.FH_E3 E3 +6.7.22.RK.LH AATGTTCAACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V11" GT 1331807 6.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.LH_D3 D3 +6.7.22.RK.RH CCGATAAAGGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V35" GT 1331807 6.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.7.22.RK.RH_F3 F3 +6.8.22.RK.FH CTACAGGGTCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.FH_A1 A1 +6.8.22.RK.LH TTCGATGCCGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.LH_C1 C1 +6.8.22.RK.RH GTTCATTAAACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 6.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.8.22.RK.RH_B1 B1 +6.9.22.RK.FH TCAGACCAACTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V45" GT 1331807 6.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.FH_G1 G1 +6.9.22.RK.LH ATATGTTCTCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V33" GT 1331807 6.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.LH_F1 F1 +6.9.22.RK.RH ACTCTGTAATTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V21" GT 1331807 6.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_6.9.22.RK.RH_E1 E1 +9.1.22.RK.FH AGAATCCACCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V116" GT 1331807 9.1.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.1.22.RK.FH_D12 D12 +9.1.22.RK.LH TGACAGAATCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V68" GT 1331807 9.1.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_9.1.22.RK.LH_H12 H12 +9.1.22.RK.RH TCGTTGGGACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V164" GT 1331807 9.1.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.1.22.RK.RH_H12 H12 +9.10.22.RK.FH AGTGCAGGAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V138" GT 1331807 9.10.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.FH_F10 F10 +9.10.22.RK.LH AGTGTTTCGGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V126" GT 1331807 9.10.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.LH_E10 E10 +9.10.22.RK.RH GTTGCTGAGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V150" GT 1331807 9.10.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.10.22.RK.RH_G10 G10 +9.11.22.RK.FH TTGCCGCTCTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V89" GT 1331807 9.11.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.FH_B9 B9 +9.11.22.RK.LH CCAGGACAGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V77" GT 1331807 9.11.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.LH_A9 A9 +9.11.22.RK.RH CCACAACGATCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V101" GT 1331807 9.11.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.11.22.RK.RH_C9 C9 +9.12.22.RK.FH ACACACCCTGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V159" GT 1331807 9.12.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.FH_H7 H7 +9.12.22.RK.LH AGATTCGCTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V88" GT 1331807 9.12.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.LH_B8 B8 +9.12.22.RK.RH AACTTTCAGGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V76" GT 1331807 9.12.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.12.22.RK.RH_A8 A8 +9.13.22.RK.FH CATAAGGGAGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V201" GT 1331807 9.13.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.FH_D1 D1 +9.13.22.RK.LH TATATAGTATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V189" GT 1331807 9.13.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.LH_C1 C1 +9.13.22.RK.RH GTGCAACCAATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V213" GT 1331807 9.13.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.13.22.RK.RH_E1 E1 +9.14.22.RK.FH GAGCCATCTGTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V103" GT 1331807 9.14.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.FH_C11 C11 +9.14.22.RK.LH ATTTCCGCTAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V127" GT 1331807 9.14.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.LH_E11 E11 +9.14.22.RK.RH TTCCACACGTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V115" GT 1331807 9.14.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.14.22.RK.RH_D11 D11 +9.15.22.RK.FH AAGTCACACACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V111" GT 1331807 9.15.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.FH_D7 D7 +9.15.22.RK.LH CCGAGGTATAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V87" GT 1331807 9.15.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.LH_B7 B7 +9.15.22.RK.RH TTAACAAGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V99" GT 1331807 9.15.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.15.22.RK.RH_C7 C7 +9.16.22.RK.FH TCGCTACAGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V134" GT 1331807 9.16.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.FH_F6 F6 +9.16.22.RK.LH CGGCCAGAAGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V122" GT 1331807 9.16.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.LH_E6 E6 +9.16.22.RK.RH TCCGATAATCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V110" GT 1331807 9.16.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.16.22.RK.RH_D6 D6 +9.17.22.RK.FH ATTATGATTATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V146" GT 1331807 9.17.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.FH_G6 G6 +9.17.22.RK.LH AACCACTAACCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V75" GT 1331807 9.17.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.LH_A7 A7 +9.17.22.RK.RH GCCACCGCCGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V158" GT 1331807 9.17.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.17.22.RK.RH_H6 H6 +9.19.22.RK.FH CAATGTAGACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V74" GT 1331807 9.19.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.FH_A6 A6 +9.19.22.RK.LH CCGCGTCTCAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V86" GT 1331807 9.19.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.LH_B6 B6 +9.19.22.RK.RH TGGTGGAGTTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V98" GT 1331807 9.19.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.19.22.RK.RH_C6 C6 +9.2.22.RK.FH GCCTACTCTCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V251" GT 1331807 9.2.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.FH_H3 H3 +9.2.22.RK.LH CTCCGAACAACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V168" GT 1331807 9.2.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.LH_A4 A4 +9.2.22.RK.RH CCACTGCCCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V180" GT 1331807 9.2.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.2.22.RK.RH_B4 B4 +9.20.22.RK.FH ACACCGCACAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V151" GT 1331807 9.20.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.FH_G11 G11 +9.20.22.RK.LH CAGCCCTACCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V163" GT 1331807 9.20.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.LH_H11 H11 +9.20.22.RK.RH GTACTCGAACCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V139" GT 1331807 9.20.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.20.22.RK.RH_F11 F11 +9.21.22.RK.FH ATAGTCCTTTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V136" GT 1331807 9.21.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.FH_F8 F8 +9.21.22.RK.LH TATAGGCTCCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V160" GT 1331807 9.21.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.LH_H8 H8 +9.21.22.RK.RH TCTTATAACGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V148" GT 1331807 9.21.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.21.22.RK.RH_G8 G8 +9.22.22.RK.FH CCGGCTTATGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V135" GT 1331807 9.22.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.FH_F7 F7 +9.22.22.RK.LH CGAATACTGACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V147" GT 1331807 9.22.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.LH_G7 G7 +9.22.22.RK.RH TGGCAGCGAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V123" GT 1331807 9.22.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.22.22.RK.RH_E7 E7 +9.23.22.RK.FH GAAGTAGCGAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V112" GT 1331807 9.23.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.FH_D8 D8 +9.23.22.RK.LH GTGAATGTTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V124" GT 1331807 9.23.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.LH_E8 E8 +9.23.22.RK.RH AACCGCATAAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V100" GT 1331807 9.23.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.23.22.RK.RH_C8 C8 +9.24.22.RK.FH GATATACCAGTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V104" GT 1331807 9.24.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.FH_C12 C12 +9.24.22.RK.LH CTATCTCCTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V92" GT 1331807 9.24.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.LH_B12 B12 +9.24.22.RK.RH TCCGCCTAGTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V80" GT 1331807 9.24.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.24.22.RK.RH_A12 A12 +9.25.22.RK.FH ATAGGAATAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V140" GT 1331807 9.25.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.25.22.RK.FH_F12 F12 +9.25.22.RK.LH CAAACCTATGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V128" GT 1331807 9.25.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.25.22.RK.LH_E12 E12 +9.26.22.RK.FH GTGTCGAGGGCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V114" GT 1331807 9.26.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.FH_D10 D10 +9.26.22.RK.LH AGTTCTCATTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V102" GT 1331807 9.26.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.LH_C10 C10 +9.26.22.RK.RH AGACTTCTCAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V90" GT 1331807 9.26.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.26.22.RK.RH_B10 B10 +9.27.22.RK.FH GCGCGGCGTTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V78" GT 1331807 9.27.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.FH_A10 A10 +9.27.22.RK.LH ATAATTGCCGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V161" GT 1331807 9.27.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.LH_H9 H9 +9.27.22.RK.RH TAAGGTCGATAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V149" GT 1331807 9.27.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.27.22.RK.RH_G9 G9 +9.29.22.RK.FH CTAGAGCTCCCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V249" GT 1331807 9.29.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.FH_H1 H1 +9.29.22.RK.LH TACTGTACTGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V237" GT 1331807 9.29.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.LH_G1 G1 +9.29.22.RK.RH CTCACCTAGGAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V225" GT 1331807 9.29.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.29.22.RK.RH_F1 F1 +9.3.22.RK.FH ACAGTTGTACGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V203" GT 1331807 9.3.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.FH_D3 D3 +9.3.22.RK.LH ATTTACAATTGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V179" GT 1331807 9.3.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.LH_B3 B3 +9.3.22.RK.RH GTCACGGACATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V191" GT 1331807 9.3.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.3.22.RK.RH_C3 C3 +9.30.22.RK.FH GTTTGGCCACAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V177" GT 1331807 9.30.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.30.22.RK.FH_B1 B1 +9.30.22.RK.LH CACAACCACAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V152" GT 1331807 9.30.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.30.22.RK.LH_G12 G12 +9.30.22.RK.RH TAGGACGGGAGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V165" GT 1331807 9.30.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.30.22.RK.RH_A1 A1 +9.4.22.RK.FH TTGCACCGTCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V167" GT 1331807 9.4.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.FH_A3 A3 +9.4.22.RK.LH GGTCTTAGCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V250" GT 1331807 9.4.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.LH_H2 H2 +9.4.22.RK.RH TCTCGCACTGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V238" GT 1331807 9.4.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.4.22.RK.RH_G2 G2 +9.5.22.RK.FH ACCCAAGCGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V214" GT 1331807 9.5.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.FH_E2 E2 +9.5.22.RK.LH AGATGCAATGAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V226" GT 1331807 9.5.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.LH_F2 F2 +9.5.22.RK.RH CAGGCCACTCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V202" GT 1331807 9.5.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.5.22.RK.RH_D2 D2 +9.6.22.RK.FH TCTTGCGGAGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V91" GT 1331807 9.6.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.FH_B11 B11 +9.6.22.RK.LH CGGAGAGACATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V162" GT 1331807 9.6.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.LH_H10 H10 +9.6.22.RK.RH GTCGCTTGCACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V79" GT 1331807 9.6.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.6.22.RK.RH_A11 A11 +9.7.22.RK.FH TATGTTGACGGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V125" GT 1331807 9.7.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.FH_E9 E9 +9.7.22.RK.LH TCGAGCCGATCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V137" GT 1331807 9.7.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.LH_F9 F9 +9.7.22.RK.RH CACCATCTCCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V113" GT 1331807 9.7.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_9.7.22.RK.RH_D9 D9 +9.8.22.RK.FH ACTGGCAAACCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V215" GT 1331807 9.8.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.FH_E3 E3 +9.8.22.RK.LH ACCAGTGACTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V239" GT 1331807 9.8.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.LH_G3 G3 +9.8.22.RK.RH GCATTCGGCGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V227" GT 1331807 9.8.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.8.22.RK.RH_F3 F3 +9.9.22.RK.FH GTCCTACACAGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V178" GT 1331807 9.9.22.RK.FH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.FH_B2 B2 +9.9.22.RK.LH AAGTCTTATCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V166" GT 1331807 9.9.22.RK.LH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.LH_A2 A2 +9.9.22.RK.RH ACTGTTTACTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V190" GT 1331807 9.9.22.RK.RH FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_9.9.22.RK.RH_C2 C2 +BLANK.242.4C GAATATACCTGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V192" GT 1331807 BLANK.242.4C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK.242.4C_C4 C4 +BLANK238.3A AGCCCTGCTACA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3A_A3 A3 +BLANK238.3B ACTCGCTCGCTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3B_B3 B3 +BLANK238.3C CTGTCTATACTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3C_C3 C3 +BLANK238.3D TAATCTCGCCGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3D_D3 D3 +BLANK238.3E AGTAAAGATCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3E_E3 E3 +BLANK238.3F TTGCTGGACGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3F_F3 F3 +BLANK238.3G TTGCGGACCCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3G_G3 G3 +BLANK238.3H CGGTATAGCAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK238.3H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina LNH GTGTGYCAGCMGCCGCGGTAA 122822 1 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_238 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_238_BLANK238.3H_H3 H3 +BLANK239.10A CTCTGAGGTAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK239.10A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10A_A10 A10 +BLANK239.10B TCCGGCGGGCAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4" GT 1331807 BLANK239.10B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10B_B10 B10 +BLANK239.10C ACATGATATTCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V6" GT 1331807 BLANK239.10C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10C_C10 C10 +BLANK239.10D TAAGGCATCGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V18" GT 1331807 BLANK239.10D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10D_D10 D10 +BLANK239.10E CACACAAAGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V30" GT 1331807 BLANK239.10E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10E_E10 E10 +BLANK239.10F CGAGGCGAGTCA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V42" GT 1331807 BLANK239.10F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10F_F10 F10 +BLANK239.10G TAGTCTAAGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V54" GT 1331807 BLANK239.10G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10G_G10 G10 +BLANK239.10H ATGACTAAGATG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V66" GT 1331807 BLANK239.10H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 2 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_239 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_239_BLANK239.10H_H10 H10 +BLANK240.3A GCGAGGAAGTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V71" GT 1331807 BLANK240.3A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3A_A3 A3 +BLANK240.3B GGACAAGTGCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V83" GT 1331807 BLANK240.3B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3B_B3 B3 +BLANK240.3C CTGATGTACACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V95" GT 1331807 BLANK240.3C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3C_C3 C3 +BLANK240.3D TGGAGCCTTGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V107" GT 1331807 BLANK240.3D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3D_D3 D3 +BLANK240.3E ACGTGCCTTAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V119" GT 1331807 BLANK240.3E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3E_E3 E3 +BLANK240.3F CACCCTTGCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V131" GT 1331807 BLANK240.3F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3F_F3 F3 +BLANK240.3G ATGCCTCGTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V143" GT 1331807 BLANK240.3G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3G_G3 G3 +BLANK240.3H GTTGTTCTGGGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V155" GT 1331807 BLANK240.3H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 3 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_240 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_240_BLANK240.3H_H3 H3 +BLANK242.10A TGCTACAGACGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V174" GT 1331807 BLANK242.10A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10A_A10 A10 +BLANK242.10B GATCCCACGTAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V186" GT 1331807 BLANK242.10B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10B_B10 B10 +BLANK242.10C CGCTAGGATGTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V198" GT 1331807 BLANK242.10C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10C_C10 C10 +BLANK242.10D CTACTTACATCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V210" GT 1331807 BLANK242.10D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10D_D10 D10 +BLANK242.10E ACCACCGTAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V222" GT 1331807 BLANK242.10E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10E_E10 E10 +BLANK242.10F CGGTTGGCGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V234" GT 1331807 BLANK242.10F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10F_F10 F10 +BLANK242.10G CCACCGGGCCGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V246" GT 1331807 BLANK242.10G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10G_G10 G10 +BLANK242.10H TATGTGCCGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V258" GT 1331807 BLANK242.10H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.10H_H10 H10 +BLANK242.11A AGGTGAGTTCTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V175" GT 1331807 BLANK242.11A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11A_A11 A11 +BLANK242.11B CCGCCAGCTTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V187" GT 1331807 BLANK242.11B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11B_B11 B11 +BLANK242.11C AGCGGTAGCGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V199" GT 1331807 BLANK242.11C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11C_C11 C11 +BLANK242.11D CGCACGTACCTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V211" GT 1331807 BLANK242.11D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11D_D11 D11 +BLANK242.11E AGGAAGTAACTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V223" GT 1331807 BLANK242.11E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11E_E11 E11 +BLANK242.11F CGATTCCTTAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V235" GT 1331807 BLANK242.11F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11F_F11 F11 +BLANK242.11G AATCCGGTCACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V247" GT 1331807 BLANK242.11G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11G_G11 G11 +BLANK242.11H ATACCGTCTTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V259" GT 1331807 BLANK242.11H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.11H_H11 H11 +BLANK242.12A AACGATCATAGA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V176" GT 1331807 BLANK242.12A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12A_A12 A12 +BLANK242.12B TCATCTTGATTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V188" GT 1331807 BLANK242.12B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12B_B12 B12 +BLANK242.12C GTCAGTATGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V200" GT 1331807 BLANK242.12C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12C_C12 C12 +BLANK242.12D GTCCTCGCGACT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V212" GT 1331807 BLANK242.12D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12D_D12 D12 +BLANK242.12E CGTTCGCTAGCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V224" GT 1331807 BLANK242.12E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12E_E12 E12 +BLANK242.12F TGCCTGCTCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V236" GT 1331807 BLANK242.12F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12F_F12 F12 +BLANK242.12G TCTTACCCATAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V248" GT 1331807 BLANK242.12G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12G_G12 G12 +BLANK242.12H TGTGCTTGTAGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V260" GT 1331807 BLANK242.12H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.12H_H12 H12 +BLANK242.4D ACCAGAAATGTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V204" GT 1331807 BLANK242.4D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4D_D4 D4 +BLANK242.4E AACACCATCGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V216" GT 1331807 BLANK242.4E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4E_E4 E4 +BLANK242.4F TCTACATACATA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V228" GT 1331807 BLANK242.4F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4F_F4 F4 +BLANK242.4G TGGCGCACGGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V240" GT 1331807 BLANK242.4G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4G_G4 G4 +BLANK242.4H ACTGCCCGATAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V252" GT 1331807 BLANK242.4H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.4H_H4 H4 +BLANK242.5A TCTGGCTACGAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V169" GT 1331807 BLANK242.5A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5A_A5 A5 +BLANK242.5B ATAGTTAGGGCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V181" GT 1331807 BLANK242.5B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5B_B5 B5 +BLANK242.5C GAATCTGACAAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V193" GT 1331807 BLANK242.5C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5C_C5 C5 +BLANK242.5D CTCATCATGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V205" GT 1331807 BLANK242.5D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5D_D5 D5 +BLANK242.5E TTATCCAGTCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V217" GT 1331807 BLANK242.5E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5E_E5 E5 +BLANK242.5F GAGTCTTGGTAA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V229" GT 1331807 BLANK242.5F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5F_F5 F5 +BLANK242.5G CATTTACATCAC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V241" GT 1331807 BLANK242.5G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5G_G5 G5 +BLANK242.5H TTCTTAACGCCT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V253" GT 1331807 BLANK242.5H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.5H_H5 H5 +BLANK242.6A AGTAGTTTCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V170" GT 1331807 BLANK242.6A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6A_A6 A6 +BLANK242.6B GACCCGTTTCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V182" GT 1331807 BLANK242.6B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6B_B6 B6 +BLANK242.6C ATTGCCTTGATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V194" GT 1331807 BLANK242.6C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6C_C6 C6 +BLANK242.6D TTAGGATTCTAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V206" GT 1331807 BLANK242.6D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6D_D6 D6 +BLANK242.6E GTTTATCTTAAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V218" GT 1331807 BLANK242.6E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6E_E6 E6 +BLANK242.6F CAGTCTAGTACG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V230" GT 1331807 BLANK242.6F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6F_F6 F6 +BLANK242.6G GTGGGACTGCGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V242" GT 1331807 BLANK242.6G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6G_G6 G6 +BLANK242.6H CTCCCGAGCTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V254" GT 1331807 BLANK242.6H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.6H_H6 H6 +BLANK242.7A CAGATCCCAACC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V171" GT 1331807 BLANK242.7A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7A_A7 A7 +BLANK242.7B TGACTGCGTTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V183" GT 1331807 BLANK242.7B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7B_B7 B7 +BLANK242.7C GAGCCCAAAGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V195" GT 1331807 BLANK242.7C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7C_C7 C7 +BLANK242.7D CAACGAACCATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V207" GT 1331807 BLANK242.7D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7D_D7 D7 +BLANK242.7E GTTCGCCGCATC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V219" GT 1331807 BLANK242.7E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7E_E7 E7 +BLANK242.7F GTTCGAGTGAAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V231" GT 1331807 BLANK242.7F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7F_F7 F7 +BLANK242.7G CGGCCTAAGTTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V243" GT 1331807 BLANK242.7G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7G_G7 G7 +BLANK242.7H TAGACTTCAGAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V255" GT 1331807 BLANK242.7H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.7H_H7 H7 +BLANK242.8A GATAGCACTCGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V172" GT 1331807 BLANK242.8A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8A_A8 A8 +BLANK242.8B ACGTTAATATTC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V184" GT 1331807 BLANK242.8B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8B_B8 B8 +BLANK242.8C CCATGTGGCTCC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V196" GT 1331807 BLANK242.8C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8C_C8 C8 +BLANK242.8D ACACGTTTGGGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V208" GT 1331807 BLANK242.8D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8D_D8 D8 +BLANK242.8E AGACTATTTCAT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V220" GT 1331807 BLANK242.8E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8E_E8 E8 +BLANK242.8F AGTCCGAGTTGT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V232" GT 1331807 BLANK242.8F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8F_F8 F8 +BLANK242.8G GCTGAGCCTTTG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V244" GT 1331807 BLANK242.8G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8G_G8 G8 +BLANK242.8H ACTTAGACTCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V256" GT 1331807 BLANK242.8H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.8H_H8 H8 +BLANK242.9A GTAATTGTAATT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V173" GT 1331807 BLANK242.9A FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9A_A9 A9 +BLANK242.9B TCTAACGAGTGC UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V185" GT 1331807 BLANK242.9B FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9B_B9 B9 +BLANK242.9C CGTTCCTTGTTA UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V197" GT 1331807 BLANK242.9C FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9C_C9 C9 +BLANK242.9D CGTCGCAGCCTT UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V209" GT 1331807 BLANK242.9D FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9D_D9 D9 +BLANK242.9E AGCGATTCCTCG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V221" GT 1331807 BLANK242.9E FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9E_E9 E9 +BLANK242.9F CGTGAGGACCAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V233" GT 1331807 BLANK242.9F FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9F_F9 F9 +BLANK242.9G AGAGACGCGTAG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V245" GT 1331807 BLANK242.9G FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9G_G9 G9 +BLANK242.9H GGACCTGGATGG UCSDMI Knight_ABTX Samples from ABTX NA NA Illumina MiSeq "Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V257" GT 1331807 BLANK242.9H FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Illumina MCM GTGTGYCAGCMGCCGCGGTAA 122822 4 Echo 550 ABTX_20230208_ABTX_11052 14339 UCSDMI 2/7/23 ABTX_Plates_238_239_240_242_S1_L001 230207_M05314_0346_000000000-KVMGL ABTX_20230208_11052_Plate_242 Sequencing by synthesis 16S rRNA V4 108379Z NA NA 1317793 ABTX_20230208_11052_Plate_242_BLANK242.9H_H9 H9 \ No newline at end of file diff --git a/sequence_processing_pipeline/tests/test_Pipeline.py b/sequence_processing_pipeline/tests/test_Pipeline.py index 6c058458..f16d483c 100644 --- a/sequence_processing_pipeline/tests/test_Pipeline.py +++ b/sequence_processing_pipeline/tests/test_Pipeline.py @@ -1794,8 +1794,7 @@ def test_get_sample_ids(self): '5.4.22.RK.FH', '5.4.22.RK.LH', '5.4.22.RK.RH', '5.5.22.RK.FH', '5.5.22.RK.LH', '5.5.22.RK.RH', '5.6.22.RK.FH', '5.6.22.RK.LH', '5.6.22.RK.RH', - '6.23.22.RK.LH', '6.26.22.RK.RH', '5.8.22.RK.FH', - '5.7.22.RK.FH', '5.7.22.RK.LH', '5.7.22.RK.RH', + '5.8.22.RK.FH', '5.7.22.RK.FH', '5.7.22.RK.LH', '5.7.22.RK.RH', '5.8.22.RK.LH', '5.8.22.RK.RH', '5.9.22.RK.FH', '5.9.22.RK.RH', '6.1.22.RK.FH', '6.1.22.RK.LH', '6.10.22.RK.FH', '6.10.22.RK.LH', '6.10.22.RK.RH', @@ -1873,7 +1872,8 @@ def test_get_sample_ids(self): 'BLANK242.8B', 'BLANK242.8C', 'BLANK242.8D', 'BLANK242.8E', 'BLANK242.8F', 'BLANK242.8G', 'BLANK242.8H', 'BLANK242.9A', 'BLANK242.9B', 'BLANK242.9C', 'BLANK242.9D', 'BLANK242.9E', - 'BLANK242.9F', 'BLANK242.9G', 'BLANK242.9H'] + 'BLANK242.9F', 'BLANK242.9G', 'BLANK242.9H', '6.23.22.RK.LH.A', + '6.23.22.RK.LH.B', '6.26.22.RK.RH.B', '6.26.22.RK.RH.A'] # test sample-information-file generation. pipeline = Pipeline(self.good_config_file, @@ -1887,7 +1887,7 @@ def test_get_sample_ids(self): obs = pipeline.get_sample_ids() - self.assertEqual(sorted(obs), sorted(exp)) + self.assertEqual(set(obs), set(exp)) def test_get_sample_names(self): exp = ['11.1.21.RK.FH', '11.1.21.RK.LH', '11.1.21.RK.RH', @@ -1942,15 +1942,14 @@ def test_get_sample_names(self): '6.20.22.RK.LH', '6.20.22.RK.RH', '6.21.22.RK.FH', '6.21.22.RK.LH', '6.21.22.RK.RH', '6.22.22.RK.FH', '6.22.22.RK.LH', '6.22.22.RK.RH', '6.23.22.RK.FH', - '6.23.22.RK.LH', '6.24.22.RK.FH', - '6.24.22.RK.RH', '6.25.22.RK.FH', '6.25.22.RK.LH', - '6.25.22.RK.RH', '6.26.22.RK.FH', '6.26.22.RK.LH', - '6.26.22.RK.RH', '6.27.22.RK.FH', - '6.27.22.RK.LH', '6.27.22.RK.RH', '6.28.22.RK.FH', - '6.28.22.RK.LH', '6.28.22.RK.RH', '6.29.22.RK.FH', - '6.29.22.RK.LH', '6.29.22.RK.RH', '6.3.22.RK.FH', - '6.3.22.RK.LH', '6.3.22.RK.RH', '6.30.22.RK.FH', - '6.30.22.RK.LH', '6.30.22.RK.RH', '6.4.22.RK.FH', + '6.24.22.RK.FH', '6.24.22.RK.RH', '6.25.22.RK.FH', + '6.25.22.RK.LH', '6.25.22.RK.RH', '6.26.22.RK.FH', + '6.26.22.RK.LH', '6.27.22.RK.FH', '6.27.22.RK.LH', + '6.27.22.RK.RH', '6.28.22.RK.FH', '6.28.22.RK.LH', + '6.28.22.RK.RH', '6.29.22.RK.FH', '6.29.22.RK.LH', + '6.29.22.RK.RH', '6.3.22.RK.FH', '6.3.22.RK.LH', + '6.3.22.RK.RH', '6.30.22.RK.FH', '6.30.22.RK.LH', + '6.30.22.RK.RH', '6.4.22.RK.FH', '6.4.22.RK.LH', '6.4.22.RK.RH', '6.5.22.RK.FH', '6.5.22.RK.LH', '6.5.22.RK.RH', '6.6.22.RK.FH', '6.6.22.RK.LH', '6.6.22.RK.RH', '6.7.22.RK.FH', '6.7.22.RK.LH', '6.7.22.RK.RH', '6.8.22.RK.FH', @@ -2003,7 +2002,9 @@ def test_get_sample_names(self): 'BLANK242.8A', 'BLANK242.8B', 'BLANK242.8C', 'BLANK242.8D', 'BLANK242.8E', 'BLANK242.8F', 'BLANK242.8G', 'BLANK242.8H', 'BLANK242.9A', 'BLANK242.9B', 'BLANK242.9C', 'BLANK242.9D', - 'BLANK242.9E', 'BLANK242.9F', 'BLANK242.9G', 'BLANK242.9H'] + 'BLANK242.9E', 'BLANK242.9F', 'BLANK242.9G', 'BLANK242.9H', + '6.26.22.RK.RH.A', '6.23.22.RK.LH.B', '6.26.22.RK.RH.B', + '6.23.22.RK.LH.A'] # test sample-information-file generation. pipeline = Pipeline(self.good_config_file, @@ -2016,7 +2017,6 @@ def test_get_sample_names(self): None) obs = pipeline.get_sample_names() - self.assertEqual(sorted(obs), sorted(exp)) # mapping file only contains one project, but this test will @@ -2070,7 +2070,7 @@ def test_get_project_info(self): self.assertDictEqual(obs_d, exp_d) break - def test_additional_constuctor_check(self): + def test_additional_constructor_check(self): with self.assertRaisesRegex(PipelineError, ("sample_sheet_path or " "mapping_file_path must " "be defined, but not " From 593e469998c944e0edcbe08188f867e7e4e31ed5 Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Thu, 26 Oct 2023 19:19:20 -0700 Subject: [PATCH 09/11] Revamped _get_sample_names_from_mapping_file() --- sequence_processing_pipeline/Pipeline.py | 23 ++++++++--------------- 1 file changed, 8 insertions(+), 15 deletions(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index 4847d83f..c44ee0ad 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -462,25 +462,18 @@ def get_sample_names(self, project_name=None): return sorted(results) def _get_sample_names_from_sample_sheet(self, project_name): - if project_name is None: - if 'orig_name' in self.sample_sheet.samples[0]: - # return set as a list to match non-replicate results. + if 'orig_name' in self.sample_sheet.samples[0]: + if project_name is None: return {x.orig_name for x in self.sample_sheet.samples} else: - return [x.Sample_Name for x in self.sample_sheet.samples] + return {x.orig_name for x in self.sample_sheet.samples + if project_name in x['Sample_Project']} else: - # Since the project-name is stored in an internal variable - # in a third-party library, convert the data structure to - # JSON using the exposed method and obtain from the result. - jsn = json_loads(self.sample_sheet.to_json()) - if 'orig_name' in self.sample_sheet.samples[0]: - key = 'orig_name' + if project_name is None: + return [x.Sample_Name for x in self.sample_sheet.samples] else: - key = 'Sample_Name' - - project_name = f'{project_name}_' - return [x[key] for x in jsn['Data'] - if project_name in x['Sample_Project']] + return [x.Sample_Name for x in self.sample_sheet.samples + if project_name in x['Sample_Project']] def _get_sample_names_from_mapping_file(self, project_name): if project_name is None: From e033288ddf4df46ff996a47e8acee024331c2054 Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Thu, 26 Oct 2023 19:23:14 -0700 Subject: [PATCH 10/11] flake8 --- sequence_processing_pipeline/Pipeline.py | 1 - 1 file changed, 1 deletion(-) diff --git a/sequence_processing_pipeline/Pipeline.py b/sequence_processing_pipeline/Pipeline.py index c44ee0ad..2bb86f9c 100644 --- a/sequence_processing_pipeline/Pipeline.py +++ b/sequence_processing_pipeline/Pipeline.py @@ -1,5 +1,4 @@ from json import load as json_load -from json import loads as json_loads from json.decoder import JSONDecodeError from os import makedirs, listdir from os.path import join, exists, isdir, basename From 37338bac7c3ec9c27f01509fc3e5ddc9c3dab3dc Mon Sep 17 00:00:00 2001 From: Charles Cowart Date: Fri, 27 Oct 2023 10:16:45 -0700 Subject: [PATCH 11/11] Removed row-index from pre_prep_w_replicates.csv --- .../tests/data/pre_prep_w_replicates.csv | 50 +++++++++---------- 1 file changed, 25 insertions(+), 25 deletions(-) diff --git a/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv b/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv index 7c245746..89ea5ffd 100644 --- a/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv +++ b/sequence_processing_pipeline/tests/data/pre_prep_w_replicates.csv @@ -1,25 +1,25 @@ - orig_name sample_name contains_replicates barcode primer primer_plate well_id_96 well_id_384 plating extractionkit_lot extraction_robot tm1000_8_tool primer_date mastermix_lot water_lot processing_robot tm300_8_tool tm50_8_tool sample_plate project_name well_description experiment_design_description library_construction_protocol linker platform run_center run_date run_prefix pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name instrument_model runid tm10_8_tool -0 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -1 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -2 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -3 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -4 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -5 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -6 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -7 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -8 9.18.19.RK.ST.900 9.18.19.RK.ST.900.B1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 B1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -9 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.B3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 B3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -10 9.20.19.RK.ST.700 9.20.19.RK.ST.700.B5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 B5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -11 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.B7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 B7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -12 9.21.19.RK.ST.500 9.21.19.RK.ST.500.B9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 B9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -13 9.22.19.RK.ST.700 9.22.19.RK.ST.700.B11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 B11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -14 9.16.19.RK.ST.700 9.16.19.RK.ST.700.B13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 B13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -15 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.B15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 B15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -16 9.18.19.RK.ST.900 9.18.19.RK.ST.900.A2 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A2 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -17 9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A4 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A4 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -18 9.20.19.RK.ST.700 9.20.19.RK.ST.700.A6 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A6 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -19 9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A8 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A8 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -20 9.21.19.RK.ST.500 9.21.19.RK.ST.500.A10 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A10 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -21 9.22.19.RK.ST.700 9.22.19.RK.ST.700.A12 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A12 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -22 9.16.19.RK.ST.700 9.16.19.RK.ST.700.A14 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A14 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq -23 9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A16 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A16 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq +orig_name sample_name contains_replicates barcode primer primer_plate well_id_96 well_id_384 plating extractionkit_lot extraction_robot tm1000_8_tool primer_date mastermix_lot water_lot processing_robot tm300_8_tool tm50_8_tool sample_plate project_name well_description experiment_design_description library_construction_protocol linker platform run_center run_date run_prefix pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name instrument_model runid tm10_8_tool +9.18.19.RK.ST.900 9.18.19.RK.ST.900.A1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.700 9.20.19.RK.ST.700.A5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.21.19.RK.ST.500 9.21.19.RK.ST.500.A9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.22.19.RK.ST.700 9.22.19.RK.ST.700.A11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.700 9.16.19.RK.ST.700.A13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.18.19.RK.ST.900 9.18.19.RK.ST.900.B1 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 B1 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.B3 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 B3 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.700 9.20.19.RK.ST.700.B5 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 B5 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.B7 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 B7 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.21.19.RK.ST.500 9.21.19.RK.ST.500.B9 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 B9 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.22.19.RK.ST.700 9.22.19.RK.ST.700.B11 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 B11 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.700 9.16.19.RK.ST.700.B13 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 B13 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.B15 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 B15 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.18.19.RK.ST.900 9.18.19.RK.ST.900.A2 True ATGTTAGGGAAT GTGYCAGCMGCCGCGGTAA 5 A1 A2 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.19.19.RK.ST.1100 9.19.19.RK.ST.1100.A4 True AAGTGGCTATCC GTGYCAGCMGCCGCGGTAA 5 A2 A4 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.700 9.20.19.RK.ST.700.A6 True GTCGTTACCCGC GTGYCAGCMGCCGCGGTAA 5 A3 A6 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.20.19.RK.ST.1100 9.20.19.RK.ST.1100.A8 True AGTATATGTTTC GTGYCAGCMGCCGCGGTAA 5 A4 A8 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.21.19.RK.ST.500 9.21.19.RK.ST.500.A10 True GGCTCGTCGGAG GTGYCAGCMGCCGCGGTAA 5 A5 A10 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.22.19.RK.ST.700 9.22.19.RK.ST.700.A12 True GACATCTGACAC GTGYCAGCMGCCGCGGTAA 5 A6 A12 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.700 9.16.19.RK.ST.700.A14 True AATTTCCTAACA GTGYCAGCMGCCGCGGTAA 5 A7 A14 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable +9.16.19.RK.ST.1100 9.16.19.RK.ST.1100.A16 True ATAAACGGACAT GTGYCAGCMGCCGCGGTAA 5 A8 A16 SF 163051748 Carmen_HOWE_KF3 109379Z 12/28/22 1266015 RNBL1950 Echo550 not applicable not applicable ABTX_Plate_174 ABTX_11052 description exp design description Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4 GT Illumina UCSDMI 3/2/23 FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 UCSDMI Rob ABTX Illumina MiSeq not applicable