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worm220.html
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worm220.html
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---
layout: genome
---
<script language="javascript">
new Browser({
chr: 'I',
viewStart: 3000000,
viewEnd: 3030000,
cookieKey: 'worm_ws220',
coordSystem: {
speciesName: 'Caenorhabditis elegans',
taxon: 6239,
auth: 'WS',
version: 220
},
sources: [{name: 'Genome',
uri: 'http://www.derkholm.net:8080/das/cel_61_220/',
desc: 'Worm reference genome build WS220',
tier_type: 'sequence',
provides_entrypoints: true},
{name: 'Genes',
desc: 'Gene structures from Wormbase WS220',
uri: 'http://www.derkholm.net:8080/das/cel_61_220/',
collapseSuperGroups: true,
provides_karyotype: true,
provides_search: true},
{name: 'Repeats',
desc: 'Repeat annotation from Wormbase + Ensembl',
uri: 'http://www.derkholm.net:8080/das/cel_61_220/',
stylesheet_uri: 'http://www.derkholm.net/dalliance-test/stylesheets/mouse-repeats.xml'}],
searchEndpoint: new DASSource('http://www.derkholm.net:8080/das/cel_61_220/'),
karyoEndpoint: new DASSource('http://www.derkholm.net:8080/das/cel_61_220/'),
uiPrefix: '{{site.uiprefix}}/',
browserLinks: {
Ensembl: 'http://www.ensembl.org/Caenorhabditis_elegans/Location/View?r=${chr}:${start}-${end}'
}
});
</script>
<div id='svgHolder'>Dalliance goes here...</div>