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Several mistakes about environment and missing files #1

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Jary-lrj opened this issue Dec 17, 2023 · 0 comments
Open

Several mistakes about environment and missing files #1

Jary-lrj opened this issue Dec 17, 2023 · 0 comments

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@Jary-lrj
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Hi there:
Thanks a lot for your paper and code. But when I try to run your code, there are several mistakes I've encountered.

  1. in environment.yml: when I run: conda create env -f environment.yml
    Could not solve for environment specs
    The following packages are incompatible
    ├─ cryptography ==37.0.1 py37h9ce1e76_0 is installable and it requires
    │ └─ openssl <1.1.2a , which can be installed;
    ├─ openssl ==3.0.5 h166bdaf_1 is not installable because it conflicts with any installable versions previously reported;
    └─ torchvision ==0.2.2 py_3 does not exist (perhaps a typo or a missing channel).
    I got some changes: delete torchvision and install it by pip; delete the version number of cryptography and openssl. By these procedures, it can run but I think it's necessary to inform you.

  2. when I run training code in readme.md:
    Traceback (most recent call last):
    File "train.py", line 17, in
    from dataset.config import *
    File "/root/autodl-tmp/users/liruijie/code/GraphEBM/dataset/init.py", line 1, in
    from dataset.CATH import CATHDataset, ProteinDataset
    File "/root/autodl-tmp/users/liruijie/code/GraphEBM/dataset/CATH.py", line 20, in
    from model.GeoMolUtils import get_dihedral_pairs
    ModuleNotFoundError: No module named 'model.GeoMolUtils'
    I can't find this file. Please fix the existing and potential bugs and provide the missing file.

I'll be appreciate if you reply to me.

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