diff --git a/browser/brave_shields/brave_shields_web_contents_observer.cc b/browser/brave_shields/brave_shields_web_contents_observer.cc
index 670aa88f8e65..d07bb0fa3f06 100644
--- a/browser/brave_shields/brave_shields_web_contents_observer.cc
+++ b/browser/brave_shields/brave_shields_web_contents_observer.cc
@@ -58,9 +58,9 @@ BraveShieldsWebContentsObserver::BraveShieldsWebContentsObserver(
       receivers_(web_contents, this) {}
 
 void BraveShieldsWebContentsObserver::RenderFrameCreated(RenderFrameHost* rfh) {
-  if (rfh && allowed_script_origins_.size()) {
+  if (rfh && allowed_scripts_.size()) {
     GetBraveShieldsRemote(rfh)->SetAllowScriptsFromOriginsOnce(
-        allowed_script_origins_);
+        allowed_scripts_);
   }
   if (rfh) {
     if (content::BrowserContext* context = rfh->GetBrowserContext()) {
@@ -233,7 +233,7 @@ void BraveShieldsWebContentsObserver::ReadyToCommitNavigation(
       !navigation_handle->IsSameDocument()) {
     if (reload_type == content::ReloadType::NONE) {
       // For new loads, we reset the counters for both blocked scripts and URLs.
-      allowed_script_origins_.clear();
+      allowed_scripts_.clear();
       blocked_url_paths_.clear();
     } else if (reload_type == content::ReloadType::NORMAL) {
       // For normal reloads (or loads to the current URL, internally converted
@@ -246,7 +246,7 @@ void BraveShieldsWebContentsObserver::ReadyToCommitNavigation(
   navigation_handle->GetWebContents()->ForEachRenderFrameHost(
       [this](content::RenderFrameHost* rfh) {
         GetBraveShieldsRemote(rfh)->SetAllowScriptsFromOriginsOnce(
-            allowed_script_origins_);
+            allowed_scripts_);
         if (content::BrowserContext* context = rfh->GetBrowserContext()) {
           if (PrefService* pref_service = user_prefs::UserPrefs::Get(context)) {
             GetBraveShieldsRemote(rfh)->SetReduceLanguageEnabled(
@@ -257,16 +257,23 @@ void BraveShieldsWebContentsObserver::ReadyToCommitNavigation(
 }
 
 void BraveShieldsWebContentsObserver::BlockAllowedScripts(
-    const std::vector<std::string>& origins) {
-  for (const auto& origin : origins) {
-    base::Erase(allowed_script_origins_, origin);
+    const std::vector<std::string>& scripts) {
+  for (const auto& script : scripts) {
+    auto origin = url::Origin::Create(GURL(script));
+    bool is_origin = origin.Serialize() == script;
+    base::EraseIf(allowed_scripts_, [is_origin, script,
+                                     origin](const std::string& value) {
+      // scripts array may have both origins or full scripts paths.
+      return is_origin ? url::Origin::Create(GURL(value)) == origin
+                       : value == script;
+    });
   }
 }
 
 void BraveShieldsWebContentsObserver::AllowScriptsOnce(
     const std::vector<std::string>& origins) {
-  allowed_script_origins_.insert(std::end(allowed_script_origins_),
-                                 std::begin(origins), std::end(origins));
+  allowed_scripts_.insert(std::end(allowed_scripts_), std::begin(origins),
+                          std::end(origins));
 }
 
 // static
diff --git a/browser/brave_shields/brave_shields_web_contents_observer.h b/browser/brave_shields/brave_shields_web_contents_observer.h
index 791ee1278530..7901c1423827 100644
--- a/browser/brave_shields/brave_shields_web_contents_observer.h
+++ b/browser/brave_shields/brave_shields_web_contents_observer.h
@@ -98,7 +98,7 @@ class BraveShieldsWebContentsObserver
   mojo::AssociatedRemote<brave_shields::mojom::BraveShields>&
   GetBraveShieldsRemote(content::RenderFrameHost* rfh);
 
-  std::vector<std::string> allowed_script_origins_;
+  std::vector<std::string> allowed_scripts_;
   // We keep a set of the current page's blocked URLs in case the page
   // continually tries to load the same blocked URLs.
   std::set<std::string> blocked_url_paths_;
diff --git a/browser/brave_shields/brave_shields_web_contents_observer_browsertest.cc b/browser/brave_shields/brave_shields_web_contents_observer_browsertest.cc
index 226cf3a133a4..54f6058ffd96 100644
--- a/browser/brave_shields/brave_shields_web_contents_observer_browsertest.cc
+++ b/browser/brave_shields/brave_shields_web_contents_observer_browsertest.cc
@@ -248,6 +248,14 @@ IN_PROC_BROWSER_TEST_F(BraveShieldsWebContentsObserverBrowserTest,
   EXPECT_EQ(GetBlockedJsList().size(), 2u);
   EXPECT_EQ(GetAllowedJsList().size(), 1u);
 
+  brave_shields_web_contents_observer()->BlockAllowedScripts(
+      {url::Origin::Create(blocked_list.back()).Serialize()});
+  ClearAllResourcesList();
+  GetWebContents()->GetController().Reload(content::ReloadType::NORMAL, true);
+  EXPECT_TRUE(WaitForLoadStop(GetWebContents()));
+  EXPECT_EQ(GetBlockedJsList().size(), 3u);
+  EXPECT_EQ(GetAllowedJsList().size(), 0u);
+
   // Disable JavaScript blocking again now.
   content_settings()->SetContentSettingCustomScope(
       ContentSettingsPattern::Wildcard(), ContentSettingsPattern::Wildcard(),
diff --git a/components/brave_shields/resources/panel/components/tree-list/index.tsx b/components/brave_shields/resources/panel/components/tree-list/index.tsx
index 9b9e322eff47..363dfcc40f26 100644
--- a/components/brave_shields/resources/panel/components/tree-list/index.tsx
+++ b/components/brave_shields/resources/panel/components/tree-list/index.tsx
@@ -61,22 +61,22 @@ function TreeList (props: Props) {
                   [props.blockedList])
 
   const handleAllowAllScripts = () => {
-    const origins = props.blockedList.map(entry => new URL(entry.url).origin)
-    getPanelBrowserAPI().dataHandler.allowScriptsOnce(origins)
+    const scripts = props.blockedList.map(entry => entry.url)
+    getPanelBrowserAPI().dataHandler.allowScriptsOnce(scripts)
   }
 
   const handleBlockAllScripts = () => {
-    const origins = allowedList.map(entry => new URL(entry.url).origin)
-    getPanelBrowserAPI().dataHandler.blockAllowedScripts(origins)
+    const scripts = allowedList.map(entry => entry.url)
+    getPanelBrowserAPI().dataHandler.blockAllowedScripts(scripts)
   }
 
-  const handleBlockScript = (name: string) => {
-    getPanelBrowserAPI().dataHandler.blockAllowedScripts([new URL(name).origin])
+  const handleBlockScript = (url: string) => {
+    getPanelBrowserAPI().dataHandler.blockAllowedScripts([url])
   }
 
-  const handleAllowScript = allowedList.length === 0 ? undefined
-    : (name: string) => {
-      getPanelBrowserAPI().dataHandler.allowScriptsOnce([new URL(name).origin])
+  const handleAllowScript = !props.allowedList ? undefined
+    : (url: string) => {
+      getPanelBrowserAPI().dataHandler.allowScriptsOnce([url])
     }
 
   return (
@@ -105,9 +105,9 @@ function TreeList (props: Props) {
               return (<TreeNode
                 key={origin}
                 host={origin}
+                resourceList={allowedScriptsByOrigin.get(origin) ?? []}
                 onPermissionButtonClick={handleBlockScript}
                 permissionButtonTitle={getLocale('braveShieldsBlockScript')}
-                resourceList={allowedScriptsByOrigin.get(origin) ?? []}
               />)
             })}
           </ScriptsList>
@@ -116,7 +116,7 @@ function TreeList (props: Props) {
         <ScriptsInfo>
           <span>{props.blockedList.length}</span>
           <span>{props.totalBlockedTitle}</span>
-          {allowedList.length > 0 && (<span>
+          {props.allowedList && (<span>
             {<a href="#" onClick={handleAllowAllScripts}>
                 {getLocale('braveShieldsAllowScriptsAll')}
               </a>
@@ -126,11 +126,11 @@ function TreeList (props: Props) {
         <ScriptsList>
           {[...blockedScriptsByOrigin.keys()].map((origin, idx) => {
             return (<TreeNode
-              key={idx}
+              key={origin}
               host={origin}
-              permissionButtonTitle={getLocale('braveShieldsAllowScriptOnce')}
-              onPermissionButtonClick={handleAllowScript}
               resourceList={blockedScriptsByOrigin.get(origin) ?? []}
+              onPermissionButtonClick={handleAllowScript}
+              permissionButtonTitle={getLocale('braveShieldsAllowScriptOnce')}
             />)
           })}
         </ScriptsList>
diff --git a/components/brave_shields/resources/panel/components/tree-list/resource-element.tsx b/components/brave_shields/resources/panel/components/tree-list/resource-element.tsx
index 474afc4e761c..2621b8cdb66e 100644
--- a/components/brave_shields/resources/panel/components/tree-list/resource-element.tsx
+++ b/components/brave_shields/resources/panel/components/tree-list/resource-element.tsx
@@ -11,11 +11,11 @@ import {
 } from '../../state/component_types'
 
 interface UrlElementProps {
-  name: string
+  path?: string
+  host: string
   permissionButtonTitle: string
   onTextExpand?: () => void
   onPermissionButtonClick: PermissionButtonHandler
-  isHost: boolean
 }
 
 function ResourceElement (props: UrlElementProps) {
@@ -28,15 +28,16 @@ function ResourceElement (props: UrlElementProps) {
     setExpanded(true)
     props.onTextExpand?.()
   }
-
+  const url = props.path ? props.host + props.path : props.host
   const handlePermissionButtonClick = () => {
-    props.onPermissionButtonClick?.(props.name)
+    props.onPermissionButtonClick?.(url)
+
   }
 
   const urlTextClass = classnames({
     [style.textUrl]: true,
     [style.textMultiline]: isExpanded,
-    [style.textHost]: props.isHost
+    [style.textHost]: props.path === undefined
   })
 
   const containerClass = classnames({
@@ -47,7 +48,7 @@ function ResourceElement (props: UrlElementProps) {
   return (
     <div className={containerClass}>
       <div className={urlTextClass} onClick={handleTextClick}>
-        {props.name}
+        {props.path ? props.path : props.host}
       </div>
       {props.onPermissionButtonClick && (
         <button onClick={handlePermissionButtonClick}
diff --git a/components/brave_shields/resources/panel/components/tree-list/tree-node.tsx b/components/brave_shields/resources/panel/components/tree-list/tree-node.tsx
index ee60d1e0bf65..c77b9385ef1b 100644
--- a/components/brave_shields/resources/panel/components/tree-list/tree-node.tsx
+++ b/components/brave_shields/resources/panel/components/tree-list/tree-node.tsx
@@ -99,14 +99,14 @@ function TreeNode (props: TreeNodeProps) {
       resourcesListElement = (
         <div ref={treeChildrenBoxRef}>
           {
-            props.resourceList.map((resource: string, idx) => {
+            props.resourceList.map((path: string, idx) => {
               return (<ResourceElement
                 key={idx}
-                isHost={false}
-                permissionButtonTitle={props.permissionButtonTitle}
-                name={resource}
+                path={path}
+                host={props.host}
                 onTextExpand={measure}
                 onPermissionButtonClick={props.onPermissionButtonClick}
+                permissionButtonTitle={props.permissionButtonTitle}
               />)
             })
           }
@@ -152,7 +152,8 @@ function TreeNode (props: TreeNodeProps) {
         {verticalAxisSVGElement}
       </S.TreeControlBox>
       <S.TreeContents>
-        <ResourceElement name={props.host} isHost={true}
+        <ResourceElement
+          host={props.host}
           onPermissionButtonClick={props.onPermissionButtonClick}
           permissionButtonTitle={props.permissionButtonTitle} />
         {resourcesListElement}