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Counter is not defined in preprocessing/featurize_seqs.py #7

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jadolfbr opened this issue Jan 26, 2022 · 1 comment
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Counter is not defined in preprocessing/featurize_seqs.py #7

jadolfbr opened this issue Jan 26, 2022 · 1 comment
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@jadolfbr
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Error message below:

~/Library/Python/3.8/lib/python/site-packages/evolocity/preprocessing/featurize_seqs.py in seqs_to_anndata(seqs)
    132             if key not in obs:
    133                 obs[key] = []
--> 134             obs[key].append(Counter([
    135                 meta[key] for meta in seqs[seq]
    136             ]).most_common(1)[0][0])

NameError: name 'Counter' is not defined
@brianhie brianhie added the bug Something isn't working label Jan 26, 2022
@brianhie
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See #6, should be fixed.

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@jadolfbr @brianhie