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Graph widget with synaptic input percentage #2259
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This could easily be quite misleading as it depends on all neurons in the circuit being fully reconstructed. We'd probably want it to, at a minimum, display warnings if any of the selected skeletons or their partners had a certain threshold of open ends. The partners need to be complete too because if neuron A has 10 synapses from incomplete neuron B and then another 10 synapses from single-node skeletons, it's actually possible that A has 20 synapses from neuron B, which would throw the numbers right off. To an extent the same is true with absolute numbers, but with absolute numbers you can at least get a good sense of what's happening if you have fully reconstructed a particular region, where fractions require the whole neuron to be reconstructed. |
As far as I remember yes, the option is there in the Graph Widget settings, accessed with the “options” button.
… On Aug 11, 2023, at 5:37 PM, Chris Barnes ***@***.***> wrote:
This could easily be quite misleading as it depends on all neurons in the circuit being fully reconstructed. We'd probably want it to, at a minimum, display warnings if any of the selected skeletons or their partners had a certain threshold of open ends. The partners need to be complete too because if neuron A has 10 synapses from incomplete neuron B and then another 10 synapses from single-node skeletons, it's actually possible that A has 20 synapses from neuron B, which would throw the numbers right off.
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I found it, thank you! It's in "Edge label" in "Graph properties". |
Hi,
Is it possible to have the option to display the annotation of edges on a graph as synaptic input percentage instead of absolute number of synapses?
Thank very much for your help,
Best,
Amina
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