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2e8c82940997..000000000000 --- a/22182/data/attachments/1a1a4c0b2124ef93.txt +++ /dev/null @@ -1,17 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 590c8ad5-64c4-4b14-92be-c34b08243f14, 'url': 'http://fake.url', 'current_dataset_version_id': None} -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 590c8ad5-64c4-4b14-92be-c34b08243f14, 'url': None, 'current_dataset_version_id': dea68177-e8b0-4654-b865-78a786231f55} -INFO processing:dataset_metadata_update.py:333 Main: No raw h5ad update required -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:45 Updating processing status -INFO processing:logger.py:26 Start create_artifact -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:91 Uploaded [bd4d9095-f11d-4915-b51c-41bd99433069/raw.h5ad] to s3://artifact_bucket/bd4d9095-f11d-4915-b51c-41bd99433069/raw.h5ad -INFO processing:process_logic.py:93 Updated database with raw_h5ad. -INFO processing:process_logic.py:45 Updating processing status -INFO processing:logger.py:28 Complete create_artifact -INFO processing:process_logic.py:45 Updating processing status -ERROR processing:dataset_metadata_update.py:353 Cannot find labeled H5AD artifact uri for dea68177-e8b0-4654-b865-78a786231f55. -INFO processing:process_logic.py:45 Updating processing status -INFO processing:dataset_metadata_update.py:357 Main: Starting thread for rds update -INFO processing:dataset_metadata_update.py:380 Main: Starting thread for cxg update -INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22182/data/attachments/1a33635e4b07d2b0.txt b/22182/data/attachments/1a33635e4b07d2b0.txt deleted file mode 100644 index 9fcbae75b79f..000000000000 --- a/22182/data/attachments/1a33635e4b07d2b0.txt +++ /dev/null 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45887677-d613-456c-b0ad-66a8a17ae6ba, 'url': 'http://fake.url', 'current_dataset_version_id': None} -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 45887677-d613-456c-b0ad-66a8a17ae6ba, 'url': None, 'current_dataset_version_id': 15eefda0-df06-496f-abce-fee989ec4d46} -INFO processing:process_logic.py:45 Updating processing status -INFO processing:logger.py:26 Start create_artifact -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:91 Uploaded [c280f3ff-3ebe-4e97-90e7-3b0b50af0c6b//tmp/tmpucwcysi6/test.rds] to s3://artifact_bucket/c280f3ff-3ebe-4e97-90e7-3b0b50af0c6b/test.rds -INFO processing:process_logic.py:93 Updated database with rds. -INFO processing:process_logic.py:100 Uploaded c280f3ff-3ebe-4e97-90e7-3b0b50af0c6b.rds to s3://datasets_bucket/c280f3ff-3ebe-4e97-90e7-3b0b50af0c6b/c280f3ff-3ebe-4e97-90e7-3b0b50af0c6b.rds -INFO processing:process_logic.py:45 Updating 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database with cxg artifact for dataset 6c028ce4-c8dc-4815-8e18-40c70d0c0c09. s3_uri is s3://fake_cxg_bucket/6c028ce4-c8dc-4815-8e18-40c70d0c0c09.cxg/", "lineno": 109, "pathname": "/single-cell-data-portal/backend/layers/processing/process_cxg.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:35:20.003Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.UPLOADED", "dataset_version_id": "6c028ce4-c8dc-4815-8e18-40c70d0c0c09"} diff --git a/22182/data/attachments/57442219097ac847.txt b/22182/data/attachments/57442219097ac847.txt deleted file mode 100644 index 06de4abf043c..000000000000 --- a/22182/data/attachments/57442219097ac847.txt +++ /dev/null @@ -1,16 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:31.003Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, 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"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", "dataset_version_id": "123", "collection_version_id": "456", "error": {}, "execution_id": "arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:30.003Z", "name": "root", "message": "Skipping slack notification for arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine because failure is related to a schema migration", "lineno": 33, "pathname": "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:34:38.003Z", "name": "processing", "message": "Failed to update dataset processing status", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 87, in update_dataset_processing_status_to_failed\n get_business_logic().update_dataset_version_status(\n File \"/single-cell-data-portal/backend/portal/api/providers.py\", line 18, in get_business_logic\n DatabaseProvider(),\n File \"/single-cell-data-portal/backend/layers/persistence/persistence.py\", line 57, in __init__\n database_uri = CorporaDbConfig().database_uri\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 54, in __getattr__\n self.load()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 88, in load\n self.load_from_aws()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 99, in load_from_aws\n secret = AwsSecret(secret_path)\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 31, in __init__\n self._load()\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 76, in _load\n response = self.secrets_mgr.describe_secret(SecretId=self.name)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/\""} -{"levelname": "ERROR", "asctime": "2024-10-03T15:34:47.003Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url\""} -{"levelname": "ERROR", "asctime": "2024-10-03T15:34:47.003Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:34:54.003Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 198, in cleanup_artifacts\n delete_many_from_s3(cellxgene_bucket, object_key + \".cxg/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url\""} diff --git a/22182/data/attachments/58f9d20f2343b1e0.txt b/22182/data/attachments/58f9d20f2343b1e0.txt deleted file mode 100644 index dec84fdd5ec4..000000000000 --- a/22182/data/attachments/58f9d20f2343b1e0.txt +++ /dev/null @@ -1,3 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 1900afa2-afda-4bc4-aa95-f3e1f3b8615b, 'url': 'http://fake.url', 'current_dataset_version_id': None} -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 1900afa2-afda-4bc4-aa95-f3e1f3b8615b, 'url': None, 'current_dataset_version_id': 6122d259-2156-4526-8089-e3dfb59a3516} -INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22182/data/attachments/591592afb24ba990.txt b/22182/data/attachments/591592afb24ba990.txt deleted file mode 100644 index da1e8ba963f9..000000000000 --- a/22182/data/attachments/591592afb24ba990.txt +++ /dev/null @@ -1,14 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 458f3e28-96c7-44cb-8a7d-f1892c0379af, 'url': 'nothing', 'current_dataset_version_id': None} -INFO processing:process_seurat.py:80 enforce canonical format in X -INFO processing:process_seurat.py:83 enforce canonical format in raw.X -INFO processing:process_logic.py:113 Converting local.h5ad -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:119 Finished converting in 0:00:00.000500 -INFO processing:logger.py:26 Start create_artifact -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:91 Uploaded [605c10af-b9e1-44b6-91a0-fd36e01a3e99/local.rds] to s3://fake_bucket_name/605c10af-b9e1-44b6-91a0-fd36e01a3e99/local.rds -INFO processing:process_logic.py:93 Updated database with rds. -INFO processing:process_logic.py:100 Uploaded 605c10af-b9e1-44b6-91a0-fd36e01a3e99.rds to s3://fake_datasets_bucket/605c10af-b9e1-44b6-91a0-fd36e01a3e99/605c10af-b9e1-44b6-91a0-fd36e01a3e99.rds -INFO processing:process_logic.py:45 Updating processing status -INFO processing:logger.py:28 Complete create_artifact \ No newline at end of file diff --git a/22182/data/attachments/5987b7a7bf20da6a.txt b/22182/data/attachments/5987b7a7bf20da6a.txt deleted file mode 100644 index 6600a1fe7ea4..000000000000 --- a/22182/data/attachments/5987b7a7bf20da6a.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "ERROR", "asctime": "2024-10-03T15:34:26.003Z", "name": "processing", "message": "Unable to publish collection version.", "lineno": 80, "pathname": "/single-cell-data-portal/backend/layers/processing/publish_revisions.py", "collection_id": "1ac5a431-2270-47c7-9f28-3790e10023b0", "collection_version_id": "e7f61106-2fe6-4a76-ad7e-1d68a95a5963", "errors": ["error message"]} diff --git a/22182/data/attachments/59a02eff8976a86d.txt b/22182/data/attachments/59a02eff8976a86d.txt deleted file mode 100644 index 99c9785392df..000000000000 --- a/22182/data/attachments/59a02eff8976a86d.txt +++ /dev/null @@ -1,4 +0,0 @@ -[PID 1 | PPID 0] Subscriber ASM is getting data -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:31.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM is getting data", "lineno": 45, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -[PID 1 | PPID 0] Subscriber ASM got data -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:31.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM got data", "lineno": 47, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} diff --git a/22182/data/attachments/59acd6cc38b45529.txt b/22182/data/attachments/59acd6cc38b45529.txt deleted file mode 100644 index 2c4c0d7020f2..000000000000 --- a/22182/data/attachments/59acd6cc38b45529.txt +++ /dev/null @@ -1,2 +0,0 @@ -INFO backend.layers.business.business:business.py:1365 {'message': 'Restoring previous collection version', 'collection_id': '0c649099-aa73-43c0-9ebd-196da39b3d3f', 'replace_version_id': 'f055a9a0-f895-4efb-a33a-39f1e0a77c56', 'restored_version_id': '1851c628-4c98-4688-ba25-724aa1a7f964'} -INFO backend.layers.business.business:business.py:1365 {'message': 'Restoring previous collection version', 'collection_id': 'ee4063ae-2a95-4078-bea6-eb8828441888', 'replace_version_id': 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113}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1fc2e166-fef0-4e37-8270-ff67472be356", "type": "RESPONSE", "details": {"status_code": 202, "content_length": 59, "response_time": 0.0038480758666992188}} diff --git a/22182/data/attachments/63232fea66bad06.txt b/22182/data/attachments/63232fea66bad06.txt deleted file mode 100644 index 8472d9e4ff11..000000000000 --- a/22182/data/attachments/63232fea66bad06.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "backend.layers.business.business", "message": "ingesting dataset", "lineno": 553, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "collection_version_id": "e9adefc9-2d7e-4f6c-b1dd-9f8aef08c0d1", "url": "http://fake.url", "current_dataset_version_id": null} diff --git a/22182/data/attachments/636167e590c09a0f.txt b/22182/data/attachments/636167e590c09a0f.txt deleted file mode 100644 index f303cb4c9292..000000000000 --- a/22182/data/attachments/636167e590c09a0f.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "backend.layers.business.business", "message": "ingesting dataset", "lineno": 553, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "collection_version_id": "74223fb4-2177-4802-bdb0-fb654c5204b0", "url": "http://fake.url", "current_dataset_version_id": null} diff --git a/22182/data/attachments/63bf167cbfc0ff7.txt b/22182/data/attachments/63bf167cbfc0ff7.txt deleted file mode 100644 index 8488c3b3b530..000000000000 --- a/22182/data/attachments/63bf167cbfc0ff7.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "15a59116-24d3-4637-8d08-5fa167354765", "type": "REQUEST", "details": {"url": "/curation/v1/collections/6d378d8d-dee8-46a1-a01a-ad72ad1104b4/datasets", "method": "POST", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "15a59116-24d3-4637-8d08-5fa167354765", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0010645389556884766}} diff --git a/22182/data/attachments/646fb43614cf65cc.txt b/22182/data/attachments/646fb43614cf65cc.txt deleted file mode 100644 index a0e8efd45eb2..000000000000 --- a/22182/data/attachments/646fb43614cf65cc.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:35:17.003Z", "name": "root", "message": "Matrix is not sparse. Percentage of non-zero elements (estimate): 100.00", "lineno": 48, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/matrix_utils.py"} diff --git a/22182/data/attachments/6482e8869508f55f.txt b/22182/data/attachments/6482e8869508f55f.txt deleted file mode 100644 index a679530bedd9..000000000000 --- a/22182/data/attachments/6482e8869508f55f.txt +++ /dev/null @@ -1,15 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 8f127d8d-a79f-4ab7-85c9-200c0df0dd57, 'url': 'nothing', 'current_dataset_version_id': None} -INFO processing:process_logic.py:113 Converting local.h5ad -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:119 Finished converting in 0:00:00.000504 -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_cxg.py:109 Updating database with cxg artifact for dataset 14137cb1-65b9-43d3-b44d-ee0191fbbe6f. s3_uri is s3://fake_cxg_bucket/14137cb1-65b9-43d3-b44d-ee0191fbbe6f.cxg/ -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:113 Converting local.h5ad -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:119 Finished converting in 0:00:00.000250 -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_cxg.py:109 Updating database with cxg artifact for dataset 14137cb1-65b9-43d3-b44d-ee0191fbbe6f. s3_uri is s3://fake_cxg_bucket/14137cb1-65b9-43d3-b44d-ee0191fbbe6f.cxg/ -INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22182/data/attachments/649d9d9f6d04e0a1.txt b/22182/data/attachments/649d9d9f6d04e0a1.txt deleted file mode 100644 index 21c438cb9c6a..000000000000 --- a/22182/data/attachments/649d9d9f6d04e0a1.txt +++ /dev/null @@ -1,3 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "40dbcd2d-fd1c-4aa5-b307-da2398bb3a98", "type": "REQUEST", "details": {"url": "/dp/v1/datasets/de3f93bd-cc36-401e-ad8d-a38c2cd0e0e1/asset/d25519fe-bfa9-4f6b-bbf9-da2222ac2a03", "method": "GET", "content_length": null}} -{"levelname": "ERROR", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "InternalServerError", "lineno": 103, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "40dbcd2d-fd1c-4aa5-b307-da2398bb3a98", "exc_info": "Traceback (most recent call last):\n File \"/usr/local/lib/python3.10/dist-packages/flask/app.py\", line 1823, in full_dispatch_request\n rv = self.dispatch_request()\n File \"/usr/local/lib/python3.10/dist-packages/flask/app.py\", line 1799, in dispatch_request\n return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/decorator.py\", line 68, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/uri_parsing.py\", line 149, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/validation.py\", line 399, in wrapper\n return function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/response.py\", line 112, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/parameter.py\", line 120, in wrapper\n return function(**kwargs)\n File \"/single-cell-data-portal/backend/portal/api/portal_api.py\", line 743, in get_dataset_asset\n raise ServerErrorHTTPException() from None\nbackend.common.utils.http_exceptions.ServerErrorHTTPException"} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "40dbcd2d-fd1c-4aa5-b307-da2398bb3a98", "type": "RESPONSE", "details": {"status_code": 500, "content_length": 159, "response_time": 0.0022125244140625}} diff --git a/22182/data/attachments/6608879caf3b54d.txt b/22182/data/attachments/6608879caf3b54d.txt deleted file mode 100644 index 67b0ce469169..000000000000 --- a/22182/data/attachments/6608879caf3b54d.txt +++ /dev/null @@ -1,5 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:54.003Z", "name": "root", "message": "", "lineno": 22, "pathname": "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", "dataset_version_id": "123", "collection_version_id": "456", "error": {}, "execution_id": "arn:aws:states:us-west-2:123456789012:execution:MyStateMachine"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:04.003Z", "name": "processing", "message": "Failed to update dataset processing status", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 87, in update_dataset_processing_status_to_failed\n get_business_logic().update_dataset_version_status(\n File \"/single-cell-data-portal/backend/portal/api/providers.py\", line 18, in get_business_logic\n DatabaseProvider(),\n File \"/single-cell-data-portal/backend/layers/persistence/persistence.py\", line 57, in __init__\n database_uri = CorporaDbConfig().database_uri\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 54, in __getattr__\n self.load()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 88, in load\n self.load_from_aws()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 99, in load_from_aws\n secret = AwsSecret(secret_path)\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 31, in __init__\n self._load()\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 76, in _load\n response = self.secrets_mgr.describe_secret(SecretId=self.name)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/\""} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:12.003Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url\""} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:12.003Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 198, in cleanup_artifacts\n delete_many_from_s3(cellxgene_bucket, object_key + \".cxg/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url\""} diff --git a/22182/data/attachments/6648610b0d5bb432.txt b/22182/data/attachments/6648610b0d5bb432.txt deleted file mode 100644 index 14df4a1cb1ec..000000000000 --- a/22182/data/attachments/6648610b0d5bb432.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:20.003Z", "name": "backend.layers.processing.utils.spatial", "message": "Failed to create and upload deep zoom assets: Test exception", "lineno": 150, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/spatial.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/utils/spatial.py\", line 145, in create_deep_zoom_assets\n image_array, _ = self._fetch_image(content)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\nException: Test exception"} diff --git a/22182/data/attachments/6663f41ce14e49a9.txt b/22182/data/attachments/6663f41ce14e49a9.txt deleted file mode 100644 index 0051df1ac124..000000000000 --- a/22182/data/attachments/6663f41ce14e49a9.txt +++ /dev/null @@ -1 +0,0 @@ -INFO backend.layers.business.business:business.py:1329 {'message': 'Restoring previous dataset version', 'dataset_id': 'ff10a4c4-2713-4a7f-a64a-badb4b2a87c5', 'replace_version_id': '34f2a618-1ab0-4dc9-b6bc-b133100eae64', 'restored_version_id': 'cae6a84a-7dd0-4514-b84b-1accd96cdb1f'} \ No newline at end of file diff --git a/22182/data/attachments/666aaececedd1f1c.txt b/22182/data/attachments/666aaececedd1f1c.txt deleted file mode 100644 index df9cf0803177..000000000000 --- a/22182/data/attachments/666aaececedd1f1c.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "da00c4c0-f63e-4d63-b192-21c2fd2f7bd3", "type": "REQUEST", "details": {"url": "/curation/v1/collections/20bbcde1-caa9-4dab-b073-c4b52f4a3324", "method": "PATCH", "content_length": 118}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "da00c4c0-f63e-4d63-b192-21c2fd2f7bd3", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 208, "response_time": 0.0016651153564453125}} diff --git a/22182/data/attachments/66d5f4e1b491f40a.txt b/22182/data/attachments/66d5f4e1b491f40a.txt deleted file mode 100644 index 7ade580e759f..000000000000 --- a/22182/data/attachments/66d5f4e1b491f40a.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "449750ea-1311-44a0-83b1-ce412359641c", "type": "REQUEST", "details": {"url": "/dp/v1/collections", "method": "POST", "content_length": 298}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "449750ea-1311-44a0-83b1-ce412359641c", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 62, "response_time": 0.0014224052429199219}} diff --git a/22182/data/attachments/66f0dedc9897bfa7.txt b/22182/data/attachments/66f0dedc9897bfa7.txt deleted file mode 100644 index 8ff5b254f856..000000000000 --- a/22182/data/attachments/66f0dedc9897bfa7.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "92966b0f-9b92-40f1-8955-23e1a77a04b1", "type": "REQUEST", "details": {"url": "/wmg/v2/query", "method": "POST", "content_length": 192}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "92966b0f-9b92-40f1-8955-23e1a77a04b1", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 19677, "response_time": 0.06378531455993652}} diff --git a/22182/data/attachments/6702990ab4d1e858.txt b/22182/data/attachments/6702990ab4d1e858.txt deleted file mode 100644 index 2709d50395c8..000000000000 --- a/22182/data/attachments/6702990ab4d1e858.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "920d1384-8c83-45df-82f6-11cb7afad10b", "type": "REQUEST", "details": {"url": "/curation/v1/collections/d0aeb7a4-2a55-4a6e-b2d4-5163f073d816/datasets/94851209-fe97-4adb-a42d-c2cf5be7f068", "method": "PATCH", "content_length": 22}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "920d1384-8c83-45df-82f6-11cb7afad10b", "type": "RESPONSE", "details": {"status_code": 202, "content_length": null, "response_time": 0.0056035518646240234}} diff --git a/22182/data/attachments/673b5bf6f82a0013.txt b/22182/data/attachments/673b5bf6f82a0013.txt deleted file mode 100644 index c013e6793e20..000000000000 --- a/22182/data/attachments/673b5bf6f82a0013.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "backend.layers.business.business", "message": "ingesting dataset", "lineno": 553, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "collection_version_id": "3b2cf5ca-550f-4160-82c2-9ea3cb085061", "url": "http://fake.url", "current_dataset_version_id": null} diff --git a/22182/data/attachments/67cba3194ba002a8.txt b/22182/data/attachments/67cba3194ba002a8.txt deleted file mode 100644 index 20d361bd42cc..000000000000 --- a/22182/data/attachments/67cba3194ba002a8.txt +++ /dev/null @@ -1,12 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "601419a5-6efa-4b99-bd8f-aa77b600e0f0", "type": "REQUEST", "details": {"url": "/curation/v1/dataset_versions/bad-input-id", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "601419a5-6efa-4b99-bd8f-aa77b600e0f0", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0008788108825683594}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "45c8a8a1-9a2e-4925-bef6-c5979bfbd882", "type": "REQUEST", "details": {"url": "/curation/v1/dataset_versions/6ba75a68-c069-44b1-8748-40821445581e", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "45c8a8a1-9a2e-4925-bef6-c5979bfbd882", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 110, "response_time": 0.0007402896881103516}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:48.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": 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"RESPONSE", "details": {"status_code": 200, "content_length": 7749, "response_time": 0.007639646530151367}} diff --git a/22182/data/attachments/8ccc38693f172e02.txt b/22182/data/attachments/8ccc38693f172e02.txt deleted file mode 100644 index ff163b19d374..000000000000 --- a/22182/data/attachments/8ccc38693f172e02.txt +++ /dev/null @@ -1,3 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': d4b8b0ae-9c15-4fa2-942d-da2d6923e808, 'url': 'http://fake.url', 'current_dataset_version_id': None} -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': d4b8b0ae-9c15-4fa2-942d-da2d6923e808, 'url': None, 'current_dataset_version_id': 280d1061-0f57-4d3e-93a5-250b1cfe5aa6} -ERROR processing:dataset_metadata_update.py:317 Cannot find raw H5AD artifact uri for 280d1061-0f57-4d3e-93a5-250b1cfe5aa6. \ No newline at end of file diff --git a/22182/data/attachments/8ce026113e5d7359.txt b/22182/data/attachments/8ce026113e5d7359.txt deleted file mode 100644 index 0269dcc14993..000000000000 --- a/22182/data/attachments/8ce026113e5d7359.txt +++ /dev/null @@ -1 +0,0 @@ - [ ] | 0% Completed | 201.37 us [########################################] | 100% Completed | 102.00 ms diff --git a/22182/data/attachments/8d235bedc48e7623.txt b/22182/data/attachments/8d235bedc48e7623.txt deleted file mode 100644 index 29cda8917244..000000000000 --- a/22182/data/attachments/8d235bedc48e7623.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "523ac5c0-5e89-4df8-813d-6b0f880e0357", "type": "REQUEST", "details": {"url": "/dp/v1/collections/6b182bac-0723-41af-8658-40086453670d", "method": "PUT", "content_length": 30}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "523ac5c0-5e89-4df8-813d-6b0f880e0357", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 408, "response_time": 0.001651763916015625}} diff --git a/22182/data/attachments/8d475069096079b1.txt b/22182/data/attachments/8d475069096079b1.txt deleted file mode 100644 index 97c195fc3b8c..000000000000 --- a/22182/data/attachments/8d475069096079b1.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e7ad6437-36a2-4edb-bc3c-12d4ebdcb697", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e7ad6437-36a2-4edb-bc3c-12d4ebdcb697", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0007369518280029297}} diff --git a/22182/data/attachments/8d62d3f67828c864.txt b/22182/data/attachments/8d62d3f67828c864.txt deleted file mode 100644 index 14b290b4792d..000000000000 --- a/22182/data/attachments/8d62d3f67828c864.txt +++ /dev/null @@ -1,3 +0,0 @@ -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} diff --git a/22182/data/attachments/8d72092a6c45e49d.txt b/22182/data/attachments/8d72092a6c45e49d.txt deleted file mode 100644 index 003f77de7a1d..000000000000 --- a/22182/data/attachments/8d72092a6c45e49d.txt +++ /dev/null @@ -1,302 +0,0 @@ -INFO root:app.py:22 {'dataset_version_id': '123', 'collection_version_id': '456', 'error': {}, 'execution_id': 'arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine'} -INFO root:app.py:33 Skipping slack notification for arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine because failure is related to a schema migration -ERROR processing:logger.py:41 Failed to update dataset processing status -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 87, in update_dataset_processing_status_to_failed - get_business_logic().update_dataset_version_status( - File "/single-cell-data-portal/backend/portal/api/providers.py", line 18, in get_business_logic - DatabaseProvider(), - File "/single-cell-data-portal/backend/layers/persistence/persistence.py", line 57, in __init__ - database_uri = CorporaDbConfig().database_uri - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 54, in __getattr__ - self.load() - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 88, in load - self.load_from_aws() - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 99, in load_from_aws - secret = AwsSecret(secret_path) - File "/single-cell-data-portal/backend/common/utils/aws.py", line 31, in __init__ - self._load() - File "/single-cell-data-portal/backend/common/utils/aws.py", line 76, in _load - response = self.secrets_mgr.describe_secret(SecretId=self.name) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/" -ERROR processing:logger.py:41 Failed to clean up artifacts. -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 192, in cleanup_artifacts - delete_many_from_s3(artifact_bucket, object_key + "/") - File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 - bucket.objects.filter(Prefix=f"{prefix}").delete() - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action - return action(self, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ - for page in parent.pages(): - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages - for page in pages: - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ - response = self._make_request(current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request - return self._method(**current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url" -ERROR processing:logger.py:41 Failed to clean up datasets. -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 194, in cleanup_artifacts - datasets_bucket = os.environ["DATASETS_BUCKET"] - File "/usr/lib/python3.10/os.py", line 680, in __getitem__ - raise KeyError(key) from None -KeyError: 'DATASETS_BUCKET' -ERROR processing:logger.py:41 Failed to clean up cxgs. -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 198, in cleanup_artifacts - delete_many_from_s3(cellxgene_bucket, object_key + ".cxg/") - File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 - bucket.objects.filter(Prefix=f"{prefix}").delete() - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action - return action(self, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ - for page in parent.pages(): - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages - for page in pages: - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ - response = self._make_request(current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request - return self._method(**current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url" \ No newline at end of file diff --git a/22182/data/attachments/8ea9e304b5bb3fe.txt b/22182/data/attachments/8ea9e304b5bb3fe.txt deleted file mode 100644 index e5465fa1cd33..000000000000 --- a/22182/data/attachments/8ea9e304b5bb3fe.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "af3e6b75-6d79-4f8e-a2fd-eb1b52ccbe35", "type": "REQUEST", "details": {"url": "/dp/v1/collections/16aea0f2-1e60-422d-acb6-2ab1176113f8/upload-links", "method": "PUT", "content_length": 113}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "af3e6b75-6d79-4f8e-a2fd-eb1b52ccbe35", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0012288093566894531}} diff --git a/22182/data/attachments/8ead2fc2a142933c.txt b/22182/data/attachments/8ead2fc2a142933c.txt deleted file mode 100644 index 9ed57c09a3e5..000000000000 --- a/22182/data/attachments/8ead2fc2a142933c.txt +++ /dev/null @@ -1,12 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10d52c9e-9281-456a-ad94-931999e38f8c", "type": "REQUEST", "details": {"url": "/curation/v1/collections/481d3abf-9b8c-4df2-ba77-0439cf6acdc3", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10d52c9e-9281-456a-ad94-931999e38f8c", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.001992464065551758}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e67847fc-f0cd-42e0-81ce-d2961a5128b9", "type": "REQUEST", "details": {"url": "/curation/v1/collections/fad76dcd-20bc-4265-8bbe-4afa43c0a605", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e67847fc-f0cd-42e0-81ce-d2961a5128b9", "type": "RESPONSE", "details": {"status_code": 401, "content_length": 119, "response_time": 0.0005893707275390625}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "383e9a03-0d2d-4609-8e91-78a2c2d4e21a", "type": "REQUEST", "details": {"url": "/curation/v1/collections/d7996d0d-7b4f-4ed7-a108-0424cb1ebccd", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "383e9a03-0d2d-4609-8e91-78a2c2d4e21a", "type": "RESPONSE", "details": {"status_code": 204, "content_length": 0, "response_time": 0.0009105205535888672}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d8f2a619-26b0-4256-84c7-8a8704538490", "type": "REQUEST", "details": {"url": "/curation/v1/collections/d7996d0d-7b4f-4ed7-a108-0424cb1ebccd", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d8f2a619-26b0-4256-84c7-8a8704538490", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0008289813995361328}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "78344557-c2ea-4c2e-bf27-bec3d97aed51", "type": "REQUEST", "details": {"url": "/curation/v1/collections/a97efd9e-1db9-4602-9443-c6582f1ae2d0", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "78344557-c2ea-4c2e-bf27-bec3d97aed51", "type": "RESPONSE", "details": {"status_code": 204, "content_length": 0, "response_time": 0.0008723735809326172}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "212584ed-8dcc-4519-a24a-0fee60d72083", "type": "REQUEST", "details": {"url": "/curation/v1/collections/a97efd9e-1db9-4602-9443-c6582f1ae2d0", "method": "DELETE", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:46.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "212584ed-8dcc-4519-a24a-0fee60d72083", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0008075237274169922}} diff --git a/22182/data/attachments/8eccd115d5447a57.txt b/22182/data/attachments/8eccd115d5447a57.txt deleted file mode 100644 index 14b290b4792d..000000000000 --- a/22182/data/attachments/8eccd115d5447a57.txt +++ /dev/null @@ -1,3 +0,0 @@ -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": 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/single-cell-data-portal/tests/unit/backend/fixtures/b9d8b23a-4923-40c1-af16-fff4b3b10aa1/awesome_sparse_matrix_99dc35b1-0bdb-47e0-9e9f-d41fd8bf06ebc", "lineno": 217, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/cxg_generation_utils.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "root", "message": "Store rows: 3", "lineno": 303, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/cxg_generation_utils.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "root", "message": "Store columns: 3", "lineno": 317, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/cxg_generation_utils.py"} diff --git a/22182/data/attachments/9099f03ea4bd419e.txt b/22182/data/attachments/9099f03ea4bd419e.txt deleted file mode 100644 index 02201ac96163..000000000000 --- a/22182/data/attachments/9099f03ea4bd419e.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "20ac58a0-dc7a-4640-a275-715f41037a1f", "type": "REQUEST", "details": {"url": "/gene_info/v1/gene_info", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "20ac58a0-dc7a-4640-a275-715f41037a1f", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 137, "response_time": 0.0009775161743164062}} diff --git a/22182/data/attachments/917ad90eda81c6b8.txt b/22182/data/attachments/917ad90eda81c6b8.txt deleted file mode 100644 index 14b290b4792d..000000000000 --- a/22182/data/attachments/917ad90eda81c6b8.txt +++ /dev/null @@ -1,3 +0,0 @@ -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} -{"levelname": "WARNING", "asctime": "2024-10-03T15:35:20.003Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} diff --git a/22182/data/attachments/924d644ef7b7eae6.txt b/22182/data/attachments/924d644ef7b7eae6.txt deleted file mode 100644 index da0fa7b868ec..000000000000 --- a/22182/data/attachments/924d644ef7b7eae6.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d365df14-a39b-4501-af68-3ea0022e94af", "type": "REQUEST", "details": {"url": "/dp/v1/collections/769e0674-fd3c-4489-a05b-d7124c851ef5/publish", "method": "POST", "content_length": 41}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d365df14-a39b-4501-af68-3ea0022e94af", "type": "RESPONSE", "details": {"status_code": 202, "content_length": 88, "response_time": 0.0034966468811035156}} diff --git a/22182/data/attachments/92bc43c5706e198c.txt b/22182/data/attachments/92bc43c5706e198c.txt deleted file mode 100644 index eb6e79e8d3a9..000000000000 --- a/22182/data/attachments/92bc43c5706e198c.txt +++ /dev/null @@ -1 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 74223fb4-2177-4802-bdb0-fb654c5204b0, 'url': 'http://fake.url', 'current_dataset_version_id': None} \ No newline at end of file diff --git a/22182/data/attachments/937309341ab6e213.txt b/22182/data/attachments/937309341ab6e213.txt deleted file mode 100644 index 8d54c7265a0f..000000000000 --- a/22182/data/attachments/937309341ab6e213.txt +++ /dev/null @@ -1 +0,0 @@ -INFO processing:publish_revisions.py:72 Skipping collection version, it is in the do not publish list \ No newline at end of file diff --git a/22182/data/attachments/93b21c6b011f8e01.txt b/22182/data/attachments/93b21c6b011f8e01.txt deleted file mode 100644 index 04681439b355..000000000000 --- a/22182/data/attachments/93b21c6b011f8e01.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10620602-b424-4b0a-8b6e-8a8ef21cc94a", "type": "REQUEST", "details": {"url": "/dp/v1/auth/key", "method": "POST", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10620602-b424-4b0a-8b6e-8a8ef21cc94a", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 193, "response_time": 0.0009593963623046875}} diff --git a/22182/data/attachments/940da077ed9d331e.txt b/22182/data/attachments/940da077ed9d331e.txt deleted file mode 100644 index b34a7499867e..000000000000 --- a/22182/data/attachments/940da077ed9d331e.txt +++ /dev/null @@ -1,68 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:27.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "04500ca6-f590-4fd8-bb0c-509c76fd9084", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 623}} -RemoteConfigWorker created with polling interval 5 -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:29.003Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "RemoteConfigWorker created with polling interval 5", "lineno": 37, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/worker.py", "request_id": "04500ca6-f590-4fd8-bb0c-509c76fd9084"} -[1][P: 0] Register ASM Remote Config Callback -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:29.003Z", "name": "ddtrace.appsec._remoteconfiguration", "message": "[1][P: 0] Register ASM Remote Config Callback", "lineno": 65, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/appsec/_remoteconfiguration.py", "request_id": "04500ca6-f590-4fd8-bb0c-509c76fd9084"} -[PID 1] Subscriber ASM initialized -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:29.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1] Subscriber ASM initialized", "lineno": 30, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": "04500ca6-f590-4fd8-bb0c-509c76fd9084"} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:30.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "04500ca6-f590-4fd8-bb0c-509c76fd9084", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 4310278, "response_time": 3.157451868057251}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:30.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fefa4fcb-cedd-4667-81a4-01432ac24f21", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 631}} -[PID 1 | PPID 0] Subscriber ASM is getting data -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:31.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM is getting data", "lineno": 45, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -[PID 1 | PPID 0] Subscriber ASM got data -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:31.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM got data", "lineno": 47, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -Agent is down or Remote Config is not enabled in the Agent -Check your Agent version, you need an Agent running on 7.39.1 version or above. -Check Your Remote Config environment variables on your Agent: -DD_REMOTE_CONFIGURATION_ENABLED=true -See: https://docs.datadoghq.com/agent/guide/how_remote_config_works/ -{"levelname": "DEBUG", "asctime": "2024-10-03T15:32:34.003Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "Agent is down or Remote Config is not enabled in the Agent\nCheck your Agent version, you need an Agent running on 7.39.1 version or above.\nCheck Your Remote Config environment variables on your Agent:\nDD_REMOTE_CONFIGURATION_ENABLED=true\nSee: https://docs.datadoghq.com/agent/guide/how_remote_config_works/", "lineno": 53, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/worker.py", "request_id": ""} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:34.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fefa4fcb-cedd-4667-81a4-01432ac24f21", "type": "RESPONSE", "details": {"status_code": 200, 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"9f06f693-f945-43d2-8f36-b8835c621cf9", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 625}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:39.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9f06f693-f945-43d2-8f36-b8835c621cf9", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2528640, "response_time": 1.8822298049926758}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:39.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d61a991f-5d3f-4a15-a97c-03f6692557d4", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 629}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:41.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d61a991f-5d3f-4a15-a97c-03f6692557d4", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2830430, "response_time": 2.092395067214966}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:41.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e10f54c5-5279-4e41-9537-db7ce7746cbf", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 653}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:43.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e10f54c5-5279-4e41-9537-db7ce7746cbf", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2288663, "response_time": 1.6613097190856934}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:43.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e7dc7027-fd51-4cfb-92bf-67c4cf3de3ac", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 641}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:45.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e7dc7027-fd51-4cfb-92bf-67c4cf3de3ac", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2633695, "response_time": 1.9145495891571045}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9d2cb8f1-0ad8-4f3c-b157-6f0b746ed36a", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 623}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:54.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9d2cb8f1-0ad8-4f3c-b157-6f0b746ed36a", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 4310278, "response_time": 3.077773094177246}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:54.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "90846b16-745a-43f1-8af4-21e2ee13a45e", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 631}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:58.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "90846b16-745a-43f1-8af4-21e2ee13a45e", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 5509729, "response_time": 4.04883074760437}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:58.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1e43c5d5-0622-417e-a115-57cf6c60030b", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 655}} -{"levelname": "INFO", "asctime": "2024-10-03T15:33:00.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1e43c5d5-0622-417e-a115-57cf6c60030b", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3427274, "response_time": 2.4203391075134277}} -{"levelname": "INFO", "asctime": "2024-10-03T15:33:00.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4798186d-6894-492a-98b3-63812a47c752", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 625}} -[PID 1 | PPID 0] Subscriber ASM is getting data, 11 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:01.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM is getting data, 11 additional messages skipped", "lineno": 45, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -[PID 1 | PPID 0] Subscriber ASM got data, 11 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:01.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM got data, 11 additional messages skipped", "lineno": 47, "pathname": 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environment variables on your Agent: -DD_REMOTE_CONFIGURATION_ENABLED=true -See: https://docs.datadoghq.com/agent/guide/how_remote_config_works/, 5 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:04.003Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "Agent is down or Remote Config is not enabled in the Agent\nCheck your Agent version, you need an Agent running on 7.39.1 version or above.\nCheck Your Remote Config environment variables on your Agent:\nDD_REMOTE_CONFIGURATION_ENABLED=true\nSee: https://docs.datadoghq.com/agent/guide/how_remote_config_works/, 5 additional messages skipped", "lineno": 53, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/worker.py", "request_id": ""} -{"levelname": "INFO", "asctime": "2024-10-03T15:33:04.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": 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76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "01bf9994-898e-4e9c-b480-63451c1ec177", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 641}} -{"levelname": "INFO", "asctime": "2024-10-03T15:33:06.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "01bf9994-898e-4e9c-b480-63451c1ec177", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 125, "response_time": 0.038559675216674805}} -{"levelname": "INFO", "asctime": "2024-10-03T15:33:12.003Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "6fc21323-9b02-4461-bd54-7c36b5f12c02", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 623}} -{"levelname": "INFO", "asctime": 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processing status -INFO processing:process.py:104 Processing dataset version 7bdaca75-0175-4e2f-a4ce-492c5a5eead1 -INFO processing:process_seurat.py:80 enforce canonical format in X -INFO processing:process_seurat.py:83 enforce canonical format in raw.X -INFO processing:process_logic.py:113 Converting local.h5ad -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:119 Finished converting in 0:00:00.000513 -INFO processing:logger.py:26 Start create_artifact -INFO processing:process_logic.py:45 Updating processing status -INFO processing:process_logic.py:91 Uploaded [7bdaca75-0175-4e2f-a4ce-492c5a5eead1/local.rds] to s3://fake_bucket_name/7bdaca75-0175-4e2f-a4ce-492c5a5eead1/local.rds -INFO processing:process_logic.py:93 Updated database with rds. -INFO processing:process_logic.py:100 Uploaded 7bdaca75-0175-4e2f-a4ce-492c5a5eead1.rds to 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50ff66b8e4d4..000000000000 --- a/22182/data/attachments/b83f941c13da1097.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Suppressed Exception", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/tests/unit/processing/test_logger.py\", line 9, in test_log_suppressed__caught\n raise ValueError(\"Test Exception\")\nValueError: Test Exception"} diff --git a/22182/data/attachments/b84b27b632469675.txt b/22182/data/attachments/b84b27b632469675.txt deleted file mode 100644 index dbef1a0992af..000000000000 --- a/22182/data/attachments/b84b27b632469675.txt +++ /dev/null @@ -1,2 +0,0 @@ -INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': e0edf378-5a51-458a-a03d-f99fd042c5f9, 'url': 'http://fake.url', 'current_dataset_version_id': None} 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/dev/null @@ -1,2 +0,0 @@ -INFO backend.layers.business.business:business.py:1329 {'message': 'Restoring previous dataset version', 'dataset_id': '2867dbdd-a327-45e1-b4e7-0d8b3f5e8980', 'replace_version_id': '2466008c-cb5b-4f8c-9132-8f2ea84ada64', 'restored_version_id': '09de97f6-c65c-4c47-baf6-0652830d5fc2'} -INFO backend.layers.business.business:business.py:1329 {'message': 'Restoring previous dataset version', 'dataset_id': '797c93dd-7dbb-4723-985a-136268b5bb0c', 'replace_version_id': '057a06dc-7b1e-4a2e-a2df-292d19028485', 'restored_version_id': '01b8b0cc-910b-4c5d-9941-2e8cd0a56c0f'} \ No newline at end of file diff --git a/22182/data/attachments/ceeb9c77c1ef71e9.txt b/22182/data/attachments/ceeb9c77c1ef71e9.txt deleted file mode 100644 index f6bbff369adb..000000000000 --- a/22182/data/attachments/ceeb9c77c1ef71e9.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:26.003Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_create_migration_revision2/58aa2bf0-a93a-44e6-88f1-507ded87e968.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/log_errors_and_cleanup/58aa2bf0-a93a-44e6-88f1-507ded87e968.json"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:26.003Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_create_migration_revision2/58aa2bf0-a93a-44e6-88f1-507ded87e968.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/span_datasets/58aa2bf0-a93a-44e6-88f1-507ded87e968.json"} diff --git a/22182/data/attachments/cf3ecbd0fa7e11d6.txt b/22182/data/attachments/cf3ecbd0fa7e11d6.txt deleted file mode 100644 index 56c867e2828e..000000000000 --- a/22182/data/attachments/cf3ecbd0fa7e11d6.txt +++ /dev/null @@ -1,4 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10eed127-e6e9-4f04-8d2d-706ebada8561", "type": "REQUEST", "details": {"url": "/dp/v1/collections/055307a3-bb6e-4b18-a06f-8d26335e52a1", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "10eed127-e6e9-4f04-8d2d-706ebada8561", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 4128, "response_time": 0.0036203861236572266}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "40e5b313-386b-4543-986f-bee4626c2b7b", "type": "REQUEST", "details": {"url": "/dp/v1/collections/25ee3070-0034-49eb-8036-a8308bd26ca2", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "40e5b313-386b-4543-986f-bee4626c2b7b", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 4143, "response_time": 0.0036666393280029297}} diff --git a/22182/data/attachments/cf4dbb71432b72b.txt b/22182/data/attachments/cf4dbb71432b72b.txt deleted file mode 100644 index 60e67043e1dc..000000000000 --- a/22182/data/attachments/cf4dbb71432b72b.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "74857dab-090a-47a1-98e9-6fca9da38dc1", "type": "REQUEST", "details": {"url": "/curation/v1/datasets", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "74857dab-090a-47a1-98e9-6fca9da38dc1", "type": "RESPONSE", "details": {"status_code": 400, "content_length": 138, "response_time": 0.0009210109710693359}} diff --git a/22182/data/attachments/cfe8049ed81ce78a.txt b/22182/data/attachments/cfe8049ed81ce78a.txt deleted file mode 100644 index 5a27b7af2865..000000000000 --- a/22182/data/attachments/cfe8049ed81ce78a.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "c4abb4e0-29ed-4d27-a6a2-2bd62b03b928", "type": "REQUEST", "details": {"url": "/dp/v1/datasets/fc27082a-996e-4709-b76d-b8e350271046/asset/fc27082a-996e-4709-b76d-b8e350271046", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:50.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "c4abb4e0-29ed-4d27-a6a2-2bd62b03b928", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 142, "response_time": 0.0007660388946533203}} diff --git a/22182/data/attachments/d18714db35e83dfe.txt b/22182/data/attachments/d18714db35e83dfe.txt deleted file mode 100644 index f695d5c51444..000000000000 --- a/22182/data/attachments/d18714db35e83dfe.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4244c56e-9668-4ce3-a9d3-0b9838aa279d", "type": "REQUEST", "details": {"url": "/curation/v1/collections/c44a707b-4e67-46b2-b46d-8593b47d4474/datasets", "method": "POST", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4244c56e-9668-4ce3-a9d3-0b9838aa279d", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 59, "response_time": 0.001348257064819336}} diff --git a/22182/data/attachments/d1eacf0b28a5d245.txt b/22182/data/attachments/d1eacf0b28a5d245.txt deleted file mode 100644 index 2f215f8564c4..000000000000 --- a/22182/data/attachments/d1eacf0b28a5d245.txt +++ /dev/null @@ -1,4 +0,0 @@ -INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/b9d8b23a-4923-40c1-af16-fff4b3b10aa1/awesome_sparse_matrix_99dc35b1-0bdb-47e0-9e9f-d41fd8bf06ebr -INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/b9d8b23a-4923-40c1-af16-fff4b3b10aa1/awesome_sparse_matrix_99dc35b1-0bdb-47e0-9e9f-d41fd8bf06ebc -INFO root:cxg_generation_utils.py:303 Store rows: 3 -INFO root:cxg_generation_utils.py:317 Store columns: 3 \ No newline at end of file diff --git a/22182/data/attachments/d249d1edae02fe20.txt b/22182/data/attachments/d249d1edae02fe20.txt deleted file mode 100644 index ea68c07f3a22..000000000000 --- a/22182/data/attachments/d249d1edae02fe20.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:26.003Z", "name": "processing", "message": "All datasets in the collection have been migrated", "lineno": 159, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "dataset_count": 2} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:26.003Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_filter_schema_version0/5a88e054-b8c9-46c9-a6a5-043d3b270276.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/log_errors_and_cleanup/5a88e054-b8c9-46c9-a6a5-043d3b270276.json"} diff --git a/22182/data/attachments/d32c2b5b417bae35.txt b/22182/data/attachments/d32c2b5b417bae35.txt deleted file mode 100644 index b5bbd9ade43b..000000000000 --- a/22182/data/attachments/d32c2b5b417bae35.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d2519421-6d3d-48fe-ba09-94982b7fc51a", "type": "REQUEST", "details": {"url": "/curation/v1/collections/5b5f5ce4-b1e8-4bd9-8dad-3372ab96fb86/datasets", "method": "POST", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d2519421-6d3d-48fe-ba09-94982b7fc51a", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 59, "response_time": 0.0012657642364501953}} diff --git a/22182/data/attachments/d3878bb803aa9842.txt b/22182/data/attachments/d3878bb803aa9842.txt deleted file mode 100644 index b7b17641f040..000000000000 --- a/22182/data/attachments/d3878bb803aa9842.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0d422d86-9967-4969-afa2-ad77a1a7bf08", "type": "REQUEST", "details": {"url": "/dp/v1/collections", "method": "OPTIONS", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0d422d86-9967-4969-afa2-ad77a1a7bf08", "type": "RESPONSE", "details": {"status_code": 200, "content_length": null, "response_time": 0.0003077983856201172}} diff --git a/22182/data/attachments/d39e404c741c2852.txt b/22182/data/attachments/d39e404c741c2852.txt deleted file mode 100644 index 4ce3364ce9fa..000000000000 --- a/22182/data/attachments/d39e404c741c2852.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "23078ae0-ede7-4beb-ae94-8ff6e252995e", "type": "REQUEST", "details": {"url": "/dp/v1/auth/key", "method": "POST", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "23078ae0-ede7-4beb-ae94-8ff6e252995e", "type": "RESPONSE", "details": {"status_code": 401, "content_length": 119, "response_time": 0.0006136894226074219}} diff --git a/22182/data/attachments/d4014c19ac2c4b3a.txt b/22182/data/attachments/d4014c19ac2c4b3a.txt deleted file mode 100644 index e0f9660233dc..000000000000 --- a/22182/data/attachments/d4014c19ac2c4b3a.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Estimated resource requirements", "lineno": 120, "pathname": "/single-cell-data-portal/backend/layers/processing/process_download.py", "memory_modifier": 1.5, "swap_modifier": 5, "min_vcpu": 1, "max_vcpu": 16, "max_swap_memory_MB": 300000, "memory_per_vcpu": 4000, "uncompressed_size_MB": 5120.0, "max_swap": 40000, "memory": 8000, "vcpus": 2} diff --git a/22182/data/attachments/d43ee5d9567aa90f.txt b/22182/data/attachments/d43ee5d9567aa90f.txt deleted file mode 100644 index 33b68173551b..000000000000 --- a/22182/data/attachments/d43ee5d9567aa90f.txt +++ /dev/null @@ -1,301 +0,0 @@ -INFO root:app.py:22 {'dataset_version_id': '123', 'collection_version_id': '456', 'error': {}, 'execution_id': 'arn:aws:states:us-west-2:123456789012:execution:MyStateMachine'} -ERROR processing:logger.py:41 Failed to update dataset processing status -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 87, in update_dataset_processing_status_to_failed - get_business_logic().update_dataset_version_status( - File "/single-cell-data-portal/backend/portal/api/providers.py", line 18, in get_business_logic - DatabaseProvider(), - File "/single-cell-data-portal/backend/layers/persistence/persistence.py", line 57, in __init__ - database_uri = CorporaDbConfig().database_uri - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 54, in __getattr__ - self.load() - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 88, in load - self.load_from_aws() - File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 99, in load_from_aws - secret = AwsSecret(secret_path) - File "/single-cell-data-portal/backend/common/utils/aws.py", line 31, in __init__ - self._load() - File "/single-cell-data-portal/backend/common/utils/aws.py", line 76, in _load - response = self.secrets_mgr.describe_secret(SecretId=self.name) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/" -ERROR processing:logger.py:41 Failed to clean up artifacts. -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 192, in cleanup_artifacts - delete_many_from_s3(artifact_bucket, object_key + "/") - File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 - bucket.objects.filter(Prefix=f"{prefix}").delete() - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action - return action(self, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ - for page in parent.pages(): - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages - for page in pages: - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ - response = self._make_request(current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request - return self._method(**current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url" -ERROR processing:logger.py:41 Failed to clean up datasets. -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 194, in cleanup_artifacts - datasets_bucket = os.environ["DATASETS_BUCKET"] - File "/usr/lib/python3.10/os.py", line 680, in __getitem__ - raise KeyError(key) from None -KeyError: 'DATASETS_BUCKET' -ERROR processing:logger.py:41 Failed to clean up cxgs. -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn - sock = connection.create_connection( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection - for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): - File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo - for res in _socket.getaddrinfo(host, port, family, type, proto, flags): -socket.gaierror: [Errno -3] Temporary failure in name resolution - -The above exception was the direct cause of the following exception: - -Traceback (most recent call last): - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send - urllib_response = conn.urlopen( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen - retries = retries.increment( - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment - raise reraise(type(error), error, _stacktrace) - File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise - raise value - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen - response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request - conn.request( - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request - rval = super().request(method, url, body, headers, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request - self.endheaders() - File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders - self._send_output(message_body, encode_chunked=encode_chunked) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output - self.send(msg) - File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send - return super().send(str) - File "/usr/lib/python3.10/http/client.py", line 976, in send - self.connect() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect - self.sock = self._new_conn() - File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn - raise NameResolutionError(self.host, self, e) from e -urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) - -During handling of the above exception, another exception occurred: - -Traceback (most recent call last): - File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 198, in cleanup_artifacts - delete_many_from_s3(cellxgene_bucket, object_key + ".cxg/") - File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 - bucket.objects.filter(Prefix=f"{prefix}").delete() - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action - return action(self, *args, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ - for page in parent.pages(): - File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages - for page in pages: - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ - response = self._make_request(current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request - return self._method(**current_kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call - return self._make_api_call(operation_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call - http, parsed_response = self._make_request( - File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request - return self._endpoint.make_request(operation_model, request_dict) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request - return self._send_request(request_dict, operation_model) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request - while self._needs_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry - responses = self._event_emitter.emit( - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit - return self._emitter.emit(aliased_event_name, **kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit - return self._emit(event_name, kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit - response = handler(**kwargs) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ - if self._checker(**checker_kwargs): - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ - should_retry = self._should_retry( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry - return self._checker(attempt_number, response, caught_exception) - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ - checker_response = checker( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ - return self._check_caught_exception( - File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception - raise caught_exception - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response - http_response = self._send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send - return self.http_session.send(request) - File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send - raise EndpointConnectionError(endpoint_url=request.url, error=e) -botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url" \ No newline at end of file diff --git a/22182/data/attachments/d5990c240eb65802.txt b/22182/data/attachments/d5990c240eb65802.txt deleted file mode 100644 index 53a41453bc72..000000000000 --- a/22182/data/attachments/d5990c240eb65802.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4b5d6066-cb79-4ede-ba0d-096f516894c0", "type": "REQUEST", "details": {"url": "/dp/v1/collections/87913876-2f2f-4932-9d1e-5bebcecf355c/upload-links", "method": "PUT", "content_length": 113}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4b5d6066-cb79-4ede-ba0d-096f516894c0", "type": "RESPONSE", "details": {"status_code": 202, "content_length": 59, "response_time": 0.003869771957397461}} diff --git a/22182/data/attachments/d5dd26327847700c.txt b/22182/data/attachments/d5dd26327847700c.txt deleted file mode 100644 index a4266b63b13e..000000000000 --- a/22182/data/attachments/d5dd26327847700c.txt +++ /dev/null @@ -1,8 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e034b455-a45f-4d8e-99bc-5440f6a9d185", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1408b1cd-ea87-4d1c-bdfa-9726bd91c84c/datasets/6afd469f-3c0d-40b2-8c9a-dafd70a001b7", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e034b455-a45f-4d8e-99bc-5440f6a9d185", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2436, "response_time": 0.003991603851318359}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0f7dbbb8-ecba-4321-a334-18ef33650e5e", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1408b1cd-ea87-4d1c-bdfa-9726bd91c84c/datasets/5c859717-5fb8-4b11-8601-04897d9ccf63", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0f7dbbb8-ecba-4321-a334-18ef33650e5e", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.001739501953125}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "b1a1f54e-192f-473b-9abc-2e094136d3b3", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1b2d11a3-6f0b-4380-ac12-07efe7d74ef5/datasets/191f0a75-d12f-4abc-aa60-8ab6e5087e69", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "b1a1f54e-192f-473b-9abc-2e094136d3b3", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0017507076263427734}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5b1f15a1-9fb6-4783-9523-6fe8e0cc19a3", "type": "REQUEST", "details": {"url": "/curation/v1/collections/9d6929db-bf3d-4189-868e-919edcbd3674/datasets/191f0a75-d12f-4abc-aa60-8ab6e5087e69", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5b1f15a1-9fb6-4783-9523-6fe8e0cc19a3", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 2495, "response_time": 0.003347158432006836}} diff --git a/22182/data/attachments/d5ef8734498226d3.txt b/22182/data/attachments/d5ef8734498226d3.txt deleted file mode 100644 index dd42fb6ed94d..000000000000 --- a/22182/data/attachments/d5ef8734498226d3.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:35:20.003Z", "name": "backend.layers.business.business", "message": "Restoring previous dataset version", "lineno": 1329, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "dataset_id": "71eabae6-4e63-418b-8a5b-9d5f39266680", "replace_version_id": "641c3f99-1104-4e9d-872f-ed5a72806217", "restored_version_id": "a905cb4f-ee09-4268-8fe6-04fa5cc93d51"} diff --git a/22182/data/attachments/d5f3c77f13e0c432.txt b/22182/data/attachments/d5f3c77f13e0c432.txt deleted file mode 100644 index 6e1862ab526f..000000000000 --- a/22182/data/attachments/d5f3c77f13e0c432.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "cec7ab43-20c1-42c3-b96c-41132d528b94", "type": "REQUEST", "details": {"url": "/dp/v1/collections/a9f0cda8-9593-43d5-9b5a-e3ef7f275cfb", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:49.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "cec7ab43-20c1-42c3-b96c-41132d528b94", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0009169578552246094}} diff --git a/22182/data/attachments/d60e0b01ddcfe54d.txt b/22182/data/attachments/d60e0b01ddcfe54d.txt deleted file mode 100644 index e5649efd4886..000000000000 --- a/22182/data/attachments/d60e0b01ddcfe54d.txt +++ /dev/null @@ -1 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:34:27.003Z", "name": "root", "message": "s3_event", "lineno": 60, "pathname": "/single-cell-data-portal/backend/layers/processing/submissions/app.py", "Records": [{"s3": {"bucket": {"name": "some_bucket"}, "object": 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"2024-10-03T15:34:29.003Z", "name": "root", "message": "create /single-cell-data-portal/tests/unit/backend/fixtures/120f04bf-af49-4214-b247-9b6c7319e9d9.cxg/X", "lineno": 217, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/cxg_generation_utils.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:29.003Z", "name": "root", "message": "start consolidating", "lineno": 106, "pathname": "/single-cell-data-portal/backend/layers/processing/h5ad_data_file.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:29.003Z", "name": "root", "message": "\t...dataset X matrix saved", "lineno": 92, "pathname": "/single-cell-data-portal/backend/layers/processing/h5ad_data_file.py"} -{"levelname": "INFO", "asctime": "2024-10-03T15:34:29.003Z", "name": "root", "message": "Completed writing to CXG.", "lineno": 94, "pathname": "/single-cell-data-portal/backend/layers/processing/h5ad_data_file.py"} diff --git a/22182/data/attachments/dd5aef2693f0deef.txt b/22182/data/attachments/dd5aef2693f0deef.txt deleted file mode 100644 index e2633dc9f674..000000000000 --- a/22182/data/attachments/dd5aef2693f0deef.txt +++ /dev/null @@ -1,3 +0,0 @@ -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 191, in cleanup_artifacts\n artifact_bucket = os.environ[\"ARTIFACT_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'ARTIFACT_BUCKET'"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} -{"levelname": "ERROR", "asctime": "2024-10-03T15:35:17.003Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 197, in cleanup_artifacts\n cellxgene_bucket = os.environ[\"CELLXGENE_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'CELLXGENE_BUCKET'"} diff --git a/22182/data/attachments/dd6f2760f384a77c.txt b/22182/data/attachments/dd6f2760f384a77c.txt deleted file mode 100644 index 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a/22182/data/attachments/fd8b3ef28e55226d.txt +++ /dev/null @@ -1,2 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "073554e3-6eac-4536-8566-575d2eed3820", "type": "REQUEST", "details": {"url": "/dp/v1/auth/key", "method": "GET", "content_length": null}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:51.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "073554e3-6eac-4536-8566-575d2eed3820", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 0, "response_time": 0.0006489753723144531}} diff --git a/22182/data/attachments/fd8d6bb0ae15c4fb.txt b/22182/data/attachments/fd8d6bb0ae15c4fb.txt deleted file mode 100644 index ea027f3430b3..000000000000 --- a/22182/data/attachments/fd8d6bb0ae15c4fb.txt +++ /dev/null @@ -1,4 +0,0 @@ -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "95b3ad2a-7576-4945-977d-e5c1fd8a6bf8", "type": "REQUEST", "details": {"url": "/curation/v1/collections/d3572145-3422-47c2-8f65-5d5e5ffd7928", "method": "PATCH", "content_length": 167}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "95b3ad2a-7576-4945-977d-e5c1fd8a6bf8", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 349, "response_time": 0.001850128173828125}} -{"levelname": "INFO", "asctime": "2024-10-03T15:32:47.003Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": 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a/22182/data/attachments/ff70c3af48cd6cac.txt b/22182/data/attachments/ff70c3af48cd6cac.txt deleted file mode 100644 index 489f88802b12..000000000000 --- a/22182/data/attachments/ff70c3af48cd6cac.txt +++ /dev/null @@ -1,10 +0,0 @@ -[PID 1 | PPID 0] Subscriber ASM is getting data, 11 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:01.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM is getting data, 11 additional messages skipped", "lineno": 45, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -[PID 1 | PPID 0] Subscriber ASM got data, 11 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:01.003Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM got data, 11 additional messages skipped", "lineno": 47, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} -Agent is down or Remote Config is not enabled in the Agent -Check your Agent version, you need an Agent running on 7.39.1 version or above. -Check Your Remote Config environment variables on your Agent: -DD_REMOTE_CONFIGURATION_ENABLED=true -See: https://docs.datadoghq.com/agent/guide/how_remote_config_works/, 5 additional messages skipped -{"levelname": "DEBUG", "asctime": "2024-10-03T15:33:04.003Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "Agent is down or Remote Config is not enabled in the Agent\nCheck your Agent version, you need an Agent running on 7.39.1 version or above.\nCheck Your Remote Config environment variables on your Agent:\nDD_REMOTE_CONFIGURATION_ENABLED=true\nSee: https://docs.datadoghq.com/agent/guide/how_remote_config_works/, 5 additional messages skipped", "lineno": 53, "pathname": 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-35, -34, -33, -32, -31, -30, -29, -28, -27, -26,\n -25, -24, -23, -22, -21, -20, -19, -18, -17, -16, -15,\n -14, -13, -12, -11, -10, -9, -8, -7, -6, -5, -4,\n -3, -2, -1, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18,\n 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40,\n 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62,\n 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73,\n 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84,\n 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,\n 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106,\n 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117,\n 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, -128,\n -127, -126, -125, -124, -123, -122, -121, -120, -119, -118, -117,\n -116, -115, -114, -113, -112, -111, -110, -109, -108, -107, -106,\n -105, -104, -103, -102, -101, -100, -99, -98, -97, -96, -95,\n -94, -93, -92, -91, -90, -89, -88, -87, -86, -85, -84,\n -83, -82, -81, -80, -79, -78, -77, -76, -75, -74, -73,\n -72, -71, -70, -69, -68, -67, -66, -65, -64, -63, -62,\n -61, -60, -59, -58, -57, -56, -55, -54, -53, -52, -51,\n -50, -49, -48, -47, -46, -45, -44, -43, -42, -41, -40,\n -39, -38, -37, -36, -35, -34, -33, -32, -31, -30, -29,\n -28, -27, -26, -25, -24, -23, -22, -21, -20, -19, -18,\n -17, -16, -15, -14, -13, -12, -11, -10, -9, -8, -7,\n -6, -5, -4, -3, -2, -1, 0, 1, 2, 3, 4,\n 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15,\n 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26,\n 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48,\n 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70,\n 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,\n 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,\n 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,\n 126, 127, -128, -127, -126, -125, -124, -123, -122, -121, -120,\n -119, -118, -117, -116, -115, -114, -113, -112, -111, -110, -109,\n -108, -107, -106, -105, -104, -103, -102, -101, -100, -99, -98,\n -97, -96, -95, -94, -93, -92, -91, -90, -89, -88, -87,\n -86, -85, -84, -83, -82, -81, -80, -79, -78, -77, -76,\n -75, -74, -73, -72, -71, -70, -69, -68, -67, -66, -65,\n -64, -63, -62, -61, -60, -59, -58, -57, -56, -55, -54,\n -53, -52, -51, -50, -49, -48, -47, -46, -45, -44, -43,\n -42, -41, -40, -39, -38, -37, -36, -35, -34, -33, -32,\n -31, -30, -29, -28, -27, -26, -25, -24, -23, -22, -21,\n -20, -19, -18, -17, -16, -15, -14, -13, -12, -11, -10,\n -9, -8, -7, -6, -5, -4, -3, -2, -1, 0, 1,\n 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23,\n 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34,\n 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45,\n 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56,\n 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67,\n 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,\n 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100,\n 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122,\n 123, 124, 125, 126, 127, -128, -127, -126, -125, -124, -123,\n -122, -121, -120, -119, -118, -117, -116, -115, -114, -113, -112,\n -111, -110, -109, -108, -107, -106, -105, -104, -103, -102, -101,\n -100, -99, -98, -97, -96, -95, -94, -93, -92, -91, -90,\n -89, -88, -87, -86, -85, -84, -83, -82, -81, -80, -79,\n -78, -77, -76, -75, -74, -73, -72, -71, -70, -69, -68,\n -67, -66, -65, -64, -63, -62, -61, -60, -59, -58, -57,\n -56, -55, -54, -53, -52, -51, -50, -49, -48, -47, -46,\n -45, -44, -43, -42, -41, -40, -39, -38, -37, -36, -35,\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype=int8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"d9b2ef3d9373d22a","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720315,"stop":1727969720316,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"fee8399886759579","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720319,"stop":1727969720319,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6f899961ac123925","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720322,"stop":1727969720323,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"8e3b848337d29e1b","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720328,"stop":1727969720328,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"944dac709b3815bd","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720334,"stop":1727969720335,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"28df3bbbee3d8b6f","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720339,"stop":1727969720339,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"bb380ee5a415f70b","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720342,"stop":1727969720343,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"957a35a23f12a18","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720348,"stop":1727969720348,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"36f70ca131b3004e","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720354,"stop":1727969720354,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"c514541346c69fb1","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720358,"stop":1727969720358,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b258bb85b444afb0","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720361,"stop":1727969720362,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"9df25e3a646f6808","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720367,"stop":1727969720367,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"926e984107045a24","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720373,"stop":1727969720373,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"5202132f7cf8d644","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720376,"stop":1727969720377,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"46e94f4f3dd6cfc2","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720380,"stop":1727969720380,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"125c3ea2f1c3ad27","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720385,"stop":1727969720386,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"7e14fed8c837be5d","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720391,"stop":1727969720392,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"4944176181b1887","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720395,"stop":1727969720396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"80b518379318f5ea","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720398,"stop":1727969720399,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"beb651ee4e9c197","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720404,"stop":1727969720404,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"8fb0d32a29fca6bb","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720410,"stop":1727969720411,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"acec9ba82c09ee72","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720414,"stop":1727969720415,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"f72a41b75e4b9754","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720418,"stop":1727969720418,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"14ecf34363c25fbb","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720423,"stop":1727969720423,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"70137373eb06e922","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720429,"stop":1727969720430,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"d8553a83e0945ca4","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720433,"stop":1727969720433,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"3b39dcc1a51c5a69","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720436,"stop":1727969720437,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"3ed85f6becdae68b","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720442,"stop":1727969720442,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters31]","uid":"3e09bf7f04fc8570","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720448,"stop":1727969720449,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters32]","uid":"c473d868561fc34f","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720452,"stop":1727969720453,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters33]","uid":"8a8793a287666c9f","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720455,"stop":1727969720456,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters34]","uid":"2b47f3649d0f033b","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720459,"stop":1727969720459,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-128., -127., -126., ..., 997., 998., 999.], dtype=float32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters35]","uid":"ecd8bdf381cad173","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720463,"stop":1727969720464,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 -128.0\n1 -127.0\n2 -126.0\n3 -125.0\n4 -124.0\n ... \n1123 995.0\n1124 996.0\n1125 997.0\n1126 998.0\n1127 999.0\nLength: 1128, dtype: float32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters36]","uid":"867e2ab026ae6224","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720467,"stop":1727969720468,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([-129.0, -128.0, -127.0, -126.0, -125.0, -124.0, -123.0, -122.0, -121.0,\n -120.0,\n ...\n 990.0, 991.0, 992.0, 993.0, 994.0, 995.0, 996.0, 997.0, 998.0,\n 999.0],\n dtype='float32', length=1129), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters37]","uid":"cf0cd7b37fb6f1c7","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720471,"stop":1727969720471,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ nan, -inf, -1., -0., 0., 0., 1., inf, nan],\n dtype=float32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters38]","uid":"2d318601bafd714c","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720474,"stop":1727969720475,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-3.4028235e+38, 0.0000000e+00, 3.4028235e+38], dtype=float32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters39]","uid":"3e91e9d3c3331ea9","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720478,"stop":1727969720478,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters40]","uid":"410ba78217101189","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720481,"stop":1727969720482,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-128., -127., -126., ..., 997., 998., 999.]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters41]","uid":"a61cf1bdf54e410","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720486,"stop":1727969720487,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 -128.0\n1 -127.0\n2 -126.0\n3 -125.0\n4 -124.0\n ... \n1123 995.0\n1124 996.0\n1125 997.0\n1126 998.0\n1127 999.0\nLength: 1128, dtype: float64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters42]","uid":"ab8e4f03f3736784","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720491,"stop":1727969720491,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([-129.0, -128.0, -127.0, -126.0, -125.0, -124.0, -123.0, -122.0, -121.0,\n -120.0,\n ...\n 990.0, 991.0, 992.0, 993.0, 994.0, 995.0, 996.0, 997.0, 998.0,\n 999.0],\n dtype='float64', length=1129), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters43]","uid":"b7ac14a1f2d3668c","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720495,"stop":1727969720496,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ nan, -inf, -1., -0., 0., 0., 1., inf, nan]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters44]","uid":"5624239af944215b","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720499,"stop":1727969720500,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-1.79769313e+308, 0.00000000e+000, 1.79769313e+308]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters45]","uid":"6417bd2f3c8dc39e","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720503,"stop":1727969720504,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters46]","uid":"b5c75e81682860a8","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1727969720507,"stop":1727969720507,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-9223372036854775808, 9223372036854775807]), 'throws': 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18, 19, 20, 21,\n 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32,\n 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43,\n 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,\n 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,\n 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87,\n 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109,\n 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, -128, -127, -126, -125,\n -124, -123, -122, -121, -120, -119, -118, -117, -116, -115, -114,\n -113, -112, -111, -110, -109, -108, -107, -106, -105, -104, -103,\n -102, -101, -100, -99, -98, -97, -96, -95, -94, -93, -92,\n -91, -90, -89, -88, -87, -86, -85, -84, -83, -82, -81,\n -80, -79, -78, -77, -76, -75, -74, -73, -72, -71, -70,\n -69, -68, -67, -66, -65, -64, -63, -62, -61, -60, -59,\n -58, -57, -56, -55, -54, -53, -52, -51, -50, -49, -48,\n -47, -46, -45, -44, -43, -42, -41, -40, -39, -38, -37,\n -36, 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-81, -80, -79, -78, -77, -76, -75, -74, -73,\n -72, -71, -70, -69, -68, -67, -66, -65, -64, -63, -62,\n -61, -60, -59, -58, -57, -56, -55, -54, -53, -52, -51,\n -50, -49, -48, -47, -46, -45, -44, -43, -42, -41, -40,\n -39, -38, -37, -36, -35, -34, -33, -32, -31, -30, -29,\n -28, -27, -26, -25, -24, -23, -22, -21, -20, -19, -18,\n -17, -16, -15, -14, -13, -12, -11, -10, -9, -8, -7,\n -6, -5, -4, -3, -2, -1, 0, 1, 2, 3, 4,\n 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15,\n 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26,\n 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48,\n 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70,\n 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,\n 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,\n 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,\n 126, 127, -128, -127, -126, -125, -124, -123, -122, -121, -120,\n -119, -118, -117, -116, -115, -114, -113, -112, -111, -110, -109,\n -108, -107, -106, -105, -104, -103, -102, -101, -100, -99, -98,\n -97, -96, -95, -94, -93, -92, -91, -90, -89, -88, -87,\n -86, -85, -84, -83, -82, -81, -80, -79, -78, -77, -76,\n -75, -74, -73, -72, -71, -70, -69, -68, -67, -66, -65,\n -64, -63, -62, -61, -60, -59, -58, -57, -56, -55, -54,\n -53, -52, -51, -50, -49, -48, -47, -46, -45, -44, -43,\n -42, -41, -40, -39, -38, -37, -36, -35, -34, -33, -32,\n -31, -30, -29, -28, -27, -26, -25, -24, -23, -22, -21,\n -20, -19, -18, -17, -16, -15, -14, -13, -12, -11, -10,\n -9, -8, -7, -6, -5, -4, -3, -2, -1, 0, 1,\n 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23,\n 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34,\n 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45,\n 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56,\n 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67,\n 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,\n 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100,\n 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122,\n 123, 124, 125, 126, 127, -128, -127, -126, -125, -124, -123,\n -122, -121, -120, -119, -118, -117, -116, -115, -114, -113, -112,\n -111, -110, -109, -108, -107, -106, -105, -104, -103, -102, -101,\n -100, -99, -98, -97, -96, -95, -94, -93, -92, -91, -90,\n -89, -88, -87, -86, -85, -84, -83, -82, -81, -80, -79,\n -78, -77, -76, -75, -74, -73, -72, -71, -70, -69, -68,\n -67, -66, -65, -64, -63, -62, -61, -60, -59, -58, -57,\n -56, -55, -54, -53, -52, -51, -50, -49, -48, -47, -46,\n -45, -44, -43, -42, -41, -40, -39, -38, -37, -36, -35,\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype=int8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"d9b2ef3d9373d22a","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720315,"stop":1727969720316,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"fee8399886759579","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720319,"stop":1727969720319,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6f899961ac123925","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720322,"stop":1727969720323,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"8e3b848337d29e1b","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720328,"stop":1727969720328,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"944dac709b3815bd","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720334,"stop":1727969720335,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"28df3bbbee3d8b6f","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720339,"stop":1727969720339,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"bb380ee5a415f70b","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720342,"stop":1727969720343,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"957a35a23f12a18","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720348,"stop":1727969720348,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"36f70ca131b3004e","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720354,"stop":1727969720354,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"c514541346c69fb1","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720358,"stop":1727969720358,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b258bb85b444afb0","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720361,"stop":1727969720362,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"9df25e3a646f6808","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720367,"stop":1727969720367,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"926e984107045a24","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720373,"stop":1727969720373,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"5202132f7cf8d644","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720376,"stop":1727969720377,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"46e94f4f3dd6cfc2","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720380,"stop":1727969720380,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"125c3ea2f1c3ad27","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720385,"stop":1727969720386,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"7e14fed8c837be5d","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720391,"stop":1727969720392,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"4944176181b1887","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720395,"stop":1727969720396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"80b518379318f5ea","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720398,"stop":1727969720399,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"beb651ee4e9c197","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720404,"stop":1727969720404,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"8fb0d32a29fca6bb","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720410,"stop":1727969720411,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"acec9ba82c09ee72","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720414,"stop":1727969720415,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"f72a41b75e4b9754","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720418,"stop":1727969720418,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"14ecf34363c25fbb","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720423,"stop":1727969720423,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"70137373eb06e922","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720429,"stop":1727969720430,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"d8553a83e0945ca4","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720433,"stop":1727969720433,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"3b39dcc1a51c5a69","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720436,"stop":1727969720437,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"3ed85f6becdae68b","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1727969720442,"stop":1727969720442,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 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2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__no_buckets","Check that no files are deleted if buckets are not specified." -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_with_invalid_collection_consortia","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters78]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_private_collection","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","0","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_unexpected_ncbi_responses","Correctly identifies a valid search result from NCBI" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_version","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_user_datasets_for_index_requires_auth","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","19","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_version_from_canonical"," - Get currently published dataset version using canonical dataset ID, or most recent active unpublished dataset - if none are published. - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","125","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_no_corpora_and_sparse","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_unsupported_type","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_index","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters61]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_added_dataset_ok"," - Publishing a version with a dataset added should succeed - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses_1","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters25]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","16","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","2","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__existing_from_link__OK"," - Calling PUT /datasets/:dataset_id on an existing dataset_id should succeed if a valid link is uploaded by the - owner of the collection or a super curator - " -"passed","Thu Oct 03 15:34:08 GMT 2024","Thu Oct 03 15:34:58 GMT 2024","50402","tests.unit.wmg_processing","test_marker_genes","MarkerGenesTests","","","test_marker_genes_cube","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_math_utils","TestMathUtils","","","test__sizeof_formatted__converts_to_gb","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-google.com]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@.]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters21]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_published","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_tombstone_collection_ok"," - A Collection can be tombstoned - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_cxg","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","19","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_update_crossref_metadata_changed_doi_returns_doi_update_ok"," - The check for changes in Crossref returns the existing DOI and the returned Crossref DOI if there is a - change between the two. - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_migration_revision","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","1","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_correct_parse_xml_tree"," - Successfully parses a properly formatted XML tree for gene information - " -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_with_issues_to_close","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","22","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__var_index_name_specified_not_unique_raises_exception","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","4","tests.unit.backend.layers.api","test_app","TestAPI","","","test__catchall_exception_handler","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","3","tests.unit.processing","test_process_validate","ProcessingTest","","","test_process_validate_fail"," - If the validation is not successful, the processing pipeline should: - 1. Set the processing status to INVALID - 2. Set a validation message accordingly - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[validate]","Check that all artifacts are deleted for the given cases." -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_revision_dataset_owner_202","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_no_artifacts","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","5","tests.unit.processing","test_processing","ProcessingTest","","","test_reprocess_cxg_success","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_missing_title_error"," - Attempting to update a dataset without providing a title raises an exception. - " -"passed","Thu Oct 03 15:32:55 GMT 2024","Thu Oct 03 15:32:55 GMT 2024","10","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_delete_of_unknown_secret_raises_exception","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__INITIALIZED_as_PENDING","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_not_authorized_403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters15]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","80","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_datasets_by_schema_200","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[]","Check that all artifacts are deleted for the given cases." -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_artifact_download_data_ok"," - Calling `get_dataset_artifact_download_data` should yield downloadable data - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","22","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_change_doi__trigger_dataset_artifact_updates"," - A collection updated with a new DOI and containing datasets should trigger artifact updates to update citation - for each dataset - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-google]","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_filter_issues_with_blocking_issues","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_h5ad_status_0","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_fullres"," - Test that _fetch_image returns the fullres image when present. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_create_empty_dataset_version_for_current_dataset__error_if_published","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters34]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters16]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_removed_dataset_ok"," - Publishing a version with a dataset removed should succeed - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_3","The 'revising_in' attribute is equal to the id of the revision Collection" -"passed","Thu Oct 03 15:32:29 GMT 2024","Thu Oct 03 15:32:30 GMT 2024","390","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_multi_valued__returns_correct_result","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__create_collection__InvalidParameters_DOI","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-google.com]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__ok","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__dataset_meta__ok","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_on_empty_dataset_does_not_generate_new_ok"," - Calling `ingest_dataset` and specifying an existing dataset that is empty should start the ingestion - without creating a new dataset version - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","131","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_sparse","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_no_doi_crossref_not_checked_ok"," - Crossref should not be called to check for updates to the publisher metadata when publishing - a revision that has no DOI. - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-://]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_no_authentication__401","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","109","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_no_corpora_and_dense","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","18","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_cleanup_with_auto_version"," - When publishing an auto_version, do NOT cleanup dataset versions from an open revision - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_crossref_checked_ok"," - Crossref should be called to check for updates to the publisher metadata when publishing - a revision that has a DOI. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_unescapes_journal_correctly","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__create_collection_strip_string_fields","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","10","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset_list","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[doi-http://somewhere.org/path/?abcd=123]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_dataset_failing_pipeline","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters62]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters74]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters38]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_ok"," - A collection can be created using `create_collection` - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-https://]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters0]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[None]","Check that all artifacts are deleted for the given cases." -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters87]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_not_published_canonical__404","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters85]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__Not_Public"," - Calling PUT /datasets/:dataset_id should fail with 403 Unauthorized - if trying to upload to a published collection - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_dataset_failing_validation","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__no_auth","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","41","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_but_not_in_env_and_use_env_is_not_set_we_use_config","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_canonical_id__OK"," - Processing starts when an update of a dataset is uploaded using canonical ids - - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata1-memory_settings1-expected1]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_rds","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__consortia__OK","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_ok"," - A collection version should be updated when using `update_collection` - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_same_doi_does_not_update_metadata","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_resurrect_collection_with_tombstoned_dataset_ok"," - Individually-tombstoned Datasets should remain tombstoned after resurrection of their parent Collection. - " -"passed","Thu Oct 03 15:35:21 GMT 2024","Thu Oct 03 15:36:43 GMT 2024","81846","tests.unit.backend.cellguide.pipeline","test_gpt_descriptions","TestGptDescriptionGenerator","","","test__gpt_description_generator","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","13","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_extract_metadata_find_raw_layer","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","137","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_dynamic_fields","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","29","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_in_a_collection","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_invalid_status_405","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails_with_404"," - Asserts a CrossrefFetchException if the GET request fails for any reason - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters14]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_crossref_checked_ok"," - When publishing a new collection with a DOI, a Crossref check should be made. - " -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","20","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_all_tissues_have_all_cell_types_except_root_cell_type-input_cell_counts_df5-expected_cell_counts_df5-input_gene_expr_df5-expected_gene_expr_df5]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct - rolled up values. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","3","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset[False]","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__prerelease_properly_formatted_semvar__returns_true","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters89]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","58","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_rds","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_fails_on_published_collection"," - `publish_collection_version` should fail if called on a collection version that is already published. - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision_not_owner__403"," - Start a revision on a collection as a non-owner. - " -"passed","Thu Oct 03 15:32:22 GMT 2024","Thu Oct 03 15:32:22 GMT 2024","1","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test_versioned_s3_paths"," - Tests that the path we use for writing the snapshot is the versioned path. - - NOTE: Ideally, we would want this to be a true test of the cube pipeline that actually runs the pipeline, - mocks the S3 upload, and then verifies that the API reads are pulling from the correct mocked S3 files. - This way, we're testing the high-level functionality of the cube pipeline and the API calls directly. - Since our testing infra doesn't currently support S3 mocks well, the past of least resistance is to test - the lower level functions that WMG uses to figure out where to write and read snapshots from. - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_check_datasets_fail_status","Check datasets when one of the dataset has failed during the ingestion process." -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","52","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetVersion","","","test_get_dataset_version_4xx","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_x_approximate_distribution_none__OK","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters53]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__401","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters64]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters69]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_fake_collection__403","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_get_order_custom_sort__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-google]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_labeled_h5ad","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters71]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[100-55]"," - Test the cropping method to ensure the image is cropped to a square - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","170","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__file_info__returns_file_size","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters7]","" -"passed","Thu Oct 03 15:40:44 GMT 2024","Thu Oct 03 15:40:44 GMT 2024","9","tests.unit.backend.cellguide.pipeline","test_valid_explorer_cxgs","TestValidExplorerCxgs","","","test__valid_explorer_cxgs","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters8]","" -"passed","Thu Oct 03 15:33:45 GMT 2024","Thu Oct 03 15:33:48 GMT 2024","3433","tests.unit.wmg_processing","test_expression_summary_and_cell_counts_diffexp","ExpressionSummaryDiffexpTests","","","test_expression_summary_diffexp","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_rds_status_1","" -"passed","Thu Oct 03 15:32:55 GMT 2024","Thu Oct 03 15:32:55 GMT 2024","11","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_init_of_unknown_secret_does_not_set_secret_metadata","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_status_ok"," - The dataset processing status can be updated using `update_dataset_status` - " -"passed","Thu Oct 03 15:32:28 GMT 2024","Thu Oct 03 15:32:33 GMT 2024","4131","tests.unit.wmg_processing","test_dataset_metadata","DatasetMetadataTests","","","test_dataset_metadata","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__strip_string_fields","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_version_id_none","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters58]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters31]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-google]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","2","tests.unit.backend.layers.thirdparty","test_s3_provider","TestS3Provider","","","test__object_deletion","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters40]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision_by_collection_version_id_403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters3]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__404","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","43","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersionID","","","test_get_collection_version_4xx","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_not_authorized_403","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_revision__OK","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_deleted_collection_does_not_appear_in_collection_lists","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[text\x01]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","72","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_200"," - Tests /curation/v1/datasets endpoint with different credentials and visibility filters. - - Test data setup: - - published_collection_1: 2 datasets - - published_collection_2: 1 dataset, other owner - - published_collection_3: 1 dataset, previously revised and published - - unpublished_collection_1: 3 datasets - - unpublished_collection_2: 2 datasets, other owner - - published_collection_1_revision: 3 datasets (one new, one modified) - - " -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","154","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_explicit_cell_ordering__returns_correct_cell_ordering","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters41]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_tombstoned__410","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","95","tests.unit.backend.layers.business","test_business","TestGetAllDatasets","","","test_get_all_private_datasets_ok"," - Private datasets the user is authorized to view can be retrieved with `get_all_private_collection_versions_with_datasets`. - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__dataset_NOT_FOUND","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters9]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_private_collection","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_as_not_owner__403"," - Publish a collection as a non-owner returns 403 - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_cxg_status_0","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_empty_dataset_ok"," - An empty dataset can be added to a collection when `create_empty_dataset` is called. - The resulting dataset should be empty and in a state ready for processing. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","19","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__get_title_and_citation_from_doi","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","2575","tests.unit.processing","test_processing","ProcessingTest","","","test_process_all","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","114","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_single_primary_dims__returns_200_and_correct_response","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_published_collection_version_for_published_collection_ok"," - A published collection can be obtained using `get_collection` - " -"passed","Thu Oct 03 15:32:21 GMT 2024","Thu Oct 03 15:33:29 GMT 2024","67598","tests.unit.backend.de.api","test_v1","DeAPIV1Tests","","","test__differentialExpression_returns_expected_results","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionUploadLinkCurators","","","test__can_reupload_dataset_as_super_curator"," - A super curator can reupload a dataset to a non-owned collection - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","19","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_in_a_tombstoned_collection_410","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__delete_datasets_from_public_access_bucket"," - Test Dataset deletes when tombstoning a public Collection with published and updated Datasets in an outstanding - Revision - " -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_illegal_characters","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_publication_of_private_collection"," - Outdated, unused Dataset assets and rows in private Collection not deleted until after Collection is published - " -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","40","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_from_aws","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters45]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[200-150]"," - Test the cropping method to ensure the image is cropped to a square - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_with_no_match","" -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_empty_request__returns_400","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__201","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","5","tests.unit.processing","test_spatial_assets_utils","","","","test__create_deep_zoom_assets","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","21","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_versions_for_canonical_ok"," - `get_collection_versions_from_canonical` can be used to retrieve all the versions - for a canonical collection, whether those are published, active or neither - " -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_invalid_collection_404","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","69","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_filter_dims__returns_valid_filter_dims__base_case","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","73","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_tombstone_collection","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query1-expected_sanitized_query1]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_and_collection","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","24","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__copies_index_of_obs_and_var_to_column","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_with_published_collection","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","46","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_custom_secret_name","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_dataset_in_private_collection__ok","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:53 GMT 2024","5982","tests.unit.backend.wmg","test_query","CensusCubeQueryParamsTest","","","test__cube_query_params_for_expression_summary_cube","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_ok"," - A collection version can be created using `create_collection_version` - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters43]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__remove_all_collection_consortia","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-https://]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_not_found_doi_fail"," - A collection with a DOI that cannot be found on Crossref will not be created - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters52]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters54]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","24","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_returns_revision_of_published_collection","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_with_owner_ok"," - Only collection versions with the specified owner should be returned, including both published and unpublished - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_published_collection__403","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_sets_is_auto_version_False"," - When publishing a collection version, is_auto_version should be set to False - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_length_fail"," - Attempting to set the order of the datasets in a collection version with a list of different length should fail. - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata3-memory_settings3-expected3]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[\x7ftext]","" -"passed","Thu Oct 03 15:35:07 GMT 2024","Thu Oct 03 15:35:08 GMT 2024","595","tests.unit.wmg_processing","test_primary_filter_dimensions","PrimaryFilterDimensionsTests","","","test_primary_filter_dimensions","" -"passed","Thu Oct 03 15:32:28 GMT 2024","Thu Oct 03 15:32:29 GMT 2024","411","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_agg_tissue_counts__returns_correct_result","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","14","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_fullpath[None]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","9","tests.unit.processing","test_rollback","","","","test_rollback_private_collections","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_adds_publisher_metadata","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_ignores_metadata_if_crossref_exception","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query3-expected_sanitized_query3]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters84]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test_update_collection_with_empty_required_fields","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_assets","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_canonical_X","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDatasetCurators","","","test__get_status__200_for_non_owned_dataset_as_super_curator","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","122","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__with_sparse_column_encoding","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_rollback","","","","test_rollback__unsupported_rollback_type","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_invalid_status_error"," - Attempting to update a dataset with a non-success processing status raises an exception. - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_collection_published__403","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_public_collection_dataset_not_authorized_403","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_strip_string_fields","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_private_restoring_previously_replaced_dataset","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__create_key__401","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link__202","" -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_missing_organism__request_returns_400","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Not_Public","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","12","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__ok","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","7","tests.unit.processing","test_process_download","TestProcessDownload","","","test_process_download_success"," - ProcessValidate should: - 1. Download the h5ad artifact - 2. Set upload status to UPLOADED - 3. upload the original file to S3 - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-google.com]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","12","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__invalid_artifact_status","" -"passed","Thu Oct 03 15:32:45 GMT 2024","Thu Oct 03 15:32:45 GMT 2024","457","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_request_multi_primary_dims_only__returns_200_and_correct_response","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters37]","" -"passed","Thu Oct 03 15:32:30 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","411","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_single_valued__returns_correct_result","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__oversized__413","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__Not_Owner","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","2","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection_verify_consortia_sorted__OK_1","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_partial__OK","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","40","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection__ok","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_unpublished_version"," - If a collection is unpublished, GET /collections/:collection_id retrieves the unpublished version - when passed the canonical collection_id - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_400","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_super_202","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_published_collection__ok","Published collections are tombstoned." -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","16","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_fullpath[/tmp]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","27","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id__ok","Verify the test collection exists and the expected fields exist." -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[other-https://www.google.com]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_cxg_status_1","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_nonexistent_dataset_4xx","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","7","tests.unit.scripts","test_tombstone","TestTombstone","","","test__tombstone_collection","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_update_non_owned_private_collection_as_super_curator__ok","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_resurrect_collection_ok"," - A tombstoned Collection can be resurrected - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","7","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_from_uri","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","17","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__check_owner__auth","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","21","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__start_revision_of_a_collection_w_links__201"," - Start a revision of a collection with links. - " -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_from_file","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters82]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters91]","" -"passed","Thu Oct 03 15:32:53 GMT 2024","Thu Oct 03 15:32:55 GMT 2024","2070","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_delete_of_existing_secret_deletes_secret","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_on_non_existing_dataset_fail"," - Calling `ingest_dataset` and specifying a non existant dataset_version_id should fail - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","25","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_a_curators_collections","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__Not_Private","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","18","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_dataset_by_canonical_id"," - Calling DELETE /collections/:collection_id/datasets/:dataset_id should work according to the - auth token passed and when using canonical ids. In this case, the unpublished collection - version will be looked up and used for deletion. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters42]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","41","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_prior_published_dataset_version"," - Given a dataset version id, return the DatasetVersion IF its been part of a published CollectionVersion - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters63]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_published_version_by_collection_id"," - GET /collections/:collection_id retrieves the published version given a canonical collection_id - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_unknown_uri"," - Call process download using unknown - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_unpublished_collection_ok"," - A dataset can be added to a collection when `ingest_dataset` is called. - The resulting dataset should be empty and in a state ready for processing. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_user_collections_for_index_requires_auth","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","26","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_tombstoned_dataset_in_a_collection_410","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters65]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","5","tests.unit.processing","test_spatial_assets_utils","","","","test__process_and_flip_image"," - Test the image processing method - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[data_source-https://www.google.com]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__regenerate_key__201","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-https://]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_while_processing_dataset__405","cannot reupload a dataset that is pending" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","3","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_skip_unprocessed_datasets"," - Test that datasets that do not appear in the processed_datasets variable in log_errors_and_cleanup are skipped - " -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","23","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[with_ethnicity_compare_dim_on_single_tissue-input_cell_counts_df4-expected_cell_counts_df4-input_gene_expr_df4-expected_gene_expr_df4]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct - rolled up values. - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_h5ad_status_1","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__private","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__OK","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","8","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__validate_with_valid_s3_uri__ok","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","23","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__slash_in_attribute_name","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__links_None_does_not_remove_publisher_metadata","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_does_not_change_original_published_at_ok"," - When publishing a collection version, the published_at for the canonical collection - should not change - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters11]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_bad_links_fail"," - A collection where a link isn't a http URI cannot be created - " -"passed","Thu Oct 03 15:32:53 GMT 2024","Thu Oct 03 15:32:53 GMT 2024","129","tests.unit.backend.layers.utils","test_aws","TestDeleteManyFromS3","","","test_delete_from_s3_raises_error_for_missing_dataset_id","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_collection_triggers_cloudfront_invalidation","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__OK","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_links_ok"," - A collection with links can be created using `create_collection` - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-google.com]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_collection_url","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_two_dois","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_private_collection_by_collection_version_id","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters22]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_published_collection_fail"," - Adding a dataset to a published collection should result in a failure - " -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_filter_issues_with_openprs","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__No_Auth","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","TestTypeConversionUtils","","","test__get_dtypes_and_schemas_of_dataframe__dtype_and_schema_returns_as_expected","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args1]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_with_invalid_link_fail"," - Adding a dataset with a wrong link should result in a failure - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","6","tests.unit.processing","test_processing","ProcessingTest","","","test_process_seurat_success","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails_with_non_2xx_code"," - Asserts a CrossrefFetchException if the GET request return a 500 error (any non 2xx will work) - " -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","79","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__primary_filter_dimensions__returns_200","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_no_auth__401","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","0","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_neg","Run method when check_datasets returns errors." -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_published_dataset_in_revision__success","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_no_auth_401","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.common","test_common","","","","test_remove_duplicate_dataset_assets","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update__error_if_published","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","34","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_published_dataset__405"," - A Dataset that has been published cannot be deleted via the API - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_dataset_published_at_with_replaced_dataset_ok"," - When publishing a collection that contains a replaced dataset, - `published_at` for the replaced dataset should not be updated - " -"passed","Thu Oct 03 15:40:26 GMT 2024","Thu Oct 03 15:40:44 GMT 2024","18162","tests.unit.backend.cellguide.pipeline","test_source_collections_generator","TestSourceCollectionsGenerator","","","test__source_collections_generator","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters5]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__call_delete_dataset__twice","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","83","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_different_var_index_than_h5ad","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__401","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_new_doi_updates_metadata","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters24]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","9","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_dictionary_to_cxg_group__writes_successfully","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","1","tests.unit.backend.common","test_feature_flag","TestFeatureFlag","","","test_feature_flag","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__remove_collection_consortia","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","1","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__new_from_link__OK"," - Calling PUT /datasets/:dataset_id should succeed if a valid link is uploaded by the owner of the collection or - a super curator - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","50","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__sparse_array_only_store_nonzeros","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-.com]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_with_rdev_prefix","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args3]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_missing_data_submission_policy_version__400"," - Checks for failure on missing data submission policy version. - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_OK","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters77]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","6","tests.unit.backend.layers.api","test_app","TestAPI","","","test__dp_api_swagger_ui__returns_200","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:38 GMT 2024","6203","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__markers_returns_200_and_correct_response","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_doi_error_ignores_metadata_ok"," - A collection with an invalid DOI will be created with empty publisher metadata - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters10]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_remove_dataset_from_unpublished_collection_ok"," - A dataset can be removed from a collection version using `delete_dataset`. This should delete the dataset. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_add_dataset_artifact_ok"," - A dataset artifact can be added using `add_dataset_artifact` - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_ok"," - The order of the datasets in a collection version is set using `set_collection_version_datasets_order`. - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__dataset_does_not_exist","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","29","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_public_collection","" -"passed","Thu Oct 03 15:36:58 GMT 2024","Thu Oct 03 15:40:26 GMT 2024","208524","tests.unit.backend.cellguide.pipeline","test_ontology_tree","OntologyTreeBuilderTests","","","test__ontology_tree_builder","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_unpublished_collection_ok"," - An unpublished collection version can be obtained using `get_collection_version` - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","5","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__new_dataset_version_bad_processing_status","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_public_collection","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_generate_dataset_citation__no_doi","" -"passed","Thu Oct 03 15:32:19 GMT 2024","Thu Oct 03 15:32:21 GMT 2024","2513","tests.unit.wmg_processing","test_cell_type_ordering","CellTypeOrderingTests","","","test_cell_type_orderings","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection__does_not_exist","" -"passed","Thu Oct 03 15:32:28 GMT 2024","Thu Oct 03 15:32:28 GMT 2024","396","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_agg_cell_type_counts__returns_correct_result","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__FAILURE","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Super_Curator","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters1]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","72","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_incorrect_gene_ids"," - Successfully raises exception for ensembl IDs that do not exist - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters75]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_not_a_uuid__403","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_create_batch_job_definition_parameters","" -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","4","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_containing_tissue__request_returns_400","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_fails_if_data_missing","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","0","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_schema_dir_rel_path","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_revision","" -"passed","Thu Oct 03 15:32:55 GMT 2024","Thu Oct 03 15:32:55 GMT 2024","31","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_init_of_existing_secret_retrieves_secret_metadata","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__create_key__201","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_strip_string_fields__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[protocol-https://www.google.com]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__restore_previous_collection_version"," - Test restoring a previous version of a collection - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__InvalidParameters","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","11","tests.unit.processing","test_rollback","","","","test_rollback_published_collections","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__nonexistent_dataset__raises_error","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_missing_collection","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-.com]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","23","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersionID","","","test_get_collection_version_ok","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__no_auth","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","384","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_anndata_colors_to_cxg_colors","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-://]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_not_found","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_revision_collection_fields","" -"passed","Thu Oct 03 15:34:58 GMT 2024","Thu Oct 03 15:35:01 GMT 2024","3175","tests.unit.wmg_processing","test_ontology_labels","OntologyLabelTests","","","test__ontology_term_label","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionUploadLinkCurators","","","test__can_upload_dataset_to_non_owned_collection_as_super_curator"," - A super curator can upload a dataset to a non-owned collection - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__current_dataset_version_bad_processing_status","" -"passed","Thu Oct 03 15:34:58 GMT 2024","Thu Oct 03 15:34:58 GMT 2024","1","tests.unit.wmg_processing","test_ontology_labels","OntologyLabelTests","","","test__gene_label","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[lab_website-https://www.google.com]","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","24","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetVersion","","","test_get_dataset_version_ok","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","34","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_published_dataset_cxg_admin"," - cxg_admin role can delete published Datasets during revisions using query_param flag 'delete_published=true' - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","TestTypeConversionUtils","","","test__get_schema_type_hint_from_dtype","" -"skipped","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_auth0_manager","TestSession","","","test_session_refresh","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_CollectionDeleteException_with_H5AD","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","0","tests.unit.scripts","test_zenhub_close","","","","test_format_issue","" -"passed","Thu Oct 03 15:32:55 GMT 2024","Thu Oct 03 15:32:57 GMT 2024","2059","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_update_of_existing_secret_updates_secret","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_calls_crossref_if_api_key_defined","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[text\x1f]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_super","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_mixed_collection_types","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_true_and_no_library_id","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","1029","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetIdVersions","","","test_get_dataset_id_versions_ok","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_published_collection_ok"," - A published collection version can be obtained using `get_collection_version` - " -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","212","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__primary_filter_dimensions__returns_valid_response_body","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_datetime","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_version__already_deleted__403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters18]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","2","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_OK","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters27]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-.com]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_key_error"," - Test that _fetch_image raises KeyError when neither fullres nor hires images are present. - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_noncanonical_raw_X","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_logger","","","","test_log_suppressed__caught","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__404","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_fails"," - Given a canonical collection with a published version and an unpublished version with is_auto_version == True, - creating another unpublished collection version where is_auto_verison is False will fail. - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update__with_new_dataset_version_id","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_invalid_doi","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-://]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__200","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","11","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_not_in_env_we_raise","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_with_blocking_issues_in_issue_list","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__add_new_collection_consortia","" -"passed","Thu Oct 03 15:32:53 GMT 2024","Thu Oct 03 15:32:53 GMT 2024","216","tests.unit.backend.layers.utils","test_aws","TestDeleteManyFromS3","","","test_delete_from_s3_handles_no_files","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__asset_NOT_FOUND","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_non_existing_collection_fail"," - Calling `ingest_dataset` on a collection that does not exist should fail - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection__not_owner","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","17","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_links__OK","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args2]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ0-dp-test-stack-ingest-process-fake_dataset_id]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_delete_non_owned_private_collection_as_super_curator__ok","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters73]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__partially_populated_dense_matrix_returns_false","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-google]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-.com]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_1","The 'revising_in' attribute is None for unauthorized public collections" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","30","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_revision_is_canceled"," - New Dataset assets and rows not deleted until after revision is canceled (for previously-published Collection) - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_pos","Positive test case for run method." -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__partially_populated_sparse_matrix_returns_true","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","12","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_singletonness","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","13","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__delete_uploaded_dataset__ok","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_false_fails"," - Given a canonical collection with a published version and an unpublished version with is_auto_version == False, - creating an unpublished collection version where is_auto_verison is False will fail. - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata0-memory_settings0-expected0]","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","6","tests.unit.backend.layers.api","test_app","TestAPI","","","test__curation_api_swagger_ui__returns_200","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters28]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[@.]","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_and_fullres_true","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters96]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_ok"," - A dataset artifact can be updated using `update_dataset_artifact` - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","24","tests.unit.backend.layers.api","test_portal_api","TestDeleteRevision","","","test__delete_revision_unauth__403"," - An unauthorized user should not be able to delete a collection revision - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_is_auto_version_succeeds__with_revision"," - Given a canonical collection with a published version and an unpublished version where is_auto_version is False, - creating another unpublished collection version where is_auto_version is True will succeed. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_info_with_id_and_name"," - Successfully calls NCBIProvider fetch and search functions with both ID and name params - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_replace_dataset_ok"," - Replacing a dataset in a collection version does not alter the custom order of the datasets. - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@.com]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","3","tests.unit.processing","test_process_validate","ProcessingTest","","","test_populate_dataset_citation__no_publication_doi","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","26","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__OK","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_public_collection_owner__405","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_ignores_metadata_if_no_doi","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__user_not_collection_owner","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","10","tests.unit.scripts","test_tombstone","TestTombstone","","","test__resurrect_collection","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestConcurrentUpdates","","","test_concurrency","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","24","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__reads_anndata_successfully","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","45","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_but_is_in_env_and_use_env_is_not_set_we_raise","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","2","tests.unit.processing","test_spatial_assets_utils","","","","test__generate_deep_zoom_assets"," - Test the method to generate deep zoom assets - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_create_empty_dataset_version_for_current_dataset","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_status__ok","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_valid_doi_ok"," - A collection can be created with a valid DOI, and the publisher metadata will be added - to the collection - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters94]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_view_non_owned_private_collection__ok","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_invalid_error_cause","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","73","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__explorer_portal_integration"," - Tests the explorer <-> portal integration. - The steps carried out by this test are: - 1. Generate the explorer_url - 2. Call the `get_dataset_identifiers` endpoint, retrieve `collection_id` and `dataset_id` from there - 3. Call the GET /collections/:collection_id endpoint, locate the dataset - " -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_true_and_fullres_false","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id__403_not_found"," - GET /collections/:collection_id returns 403 if an invalid is specified - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_invalid_processing_status__405","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi_does_not_exist__BAD_REQUEST","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_private_collection__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[doi-https://www.google.com]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","1","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__missing_curator_file_name__raises_error","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","3","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse_with_column_shift_encoding__giant_matrix_returns_false_early","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters35]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_invalid_collection__403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters6]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","2","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_private","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_same_doi"," - A collection updated with the same DOI should not trigger a Crossref call - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_artifacts_ok"," - Artifacts belonging to a dataset can be obtained with `get_dataset_artifacts` - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__check_owner__no_auth","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_bad_id__403"," - Publish a collection with a bad uuid (non existant) returns 403 - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters46]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters57]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_same_doi_publisher_metadata_not_updated_ok"," - When publishing a revision - and there is no change in DOI - publisher metadata should not be - updated if the deposited date is before the revised at or originally published at date of the - corresponding collection. - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","12","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth_visibility_public__OK","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","43","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_but_not_in_env_and_use_env_is_set_we_use_config","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_all_collections_published_does_not_retrieve_old_versions"," - `get_collections` with is_published=True should not return versions that were previously - published but have a new version - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_filter_schema_version","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","18","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_collections_for_index"," - The `collections/index` endpoint should only return public collections - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","12","tests.unit.processing","test_rollback","","","","test__clean_up","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_h5ad","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_by_version_id__403","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_change_doi"," - A collection updated with a new DOI should get new publisher metadata from Crossref - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_partial_ok"," - `update_collection` should support partial updates: if only a subset of the fields are specified, - the previous field should not be modified - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters68]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_blank_fields","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_published_dataset__fail","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_changed_doi_collection_updated_ok"," - When publishing a revision - and there is a change in DOI - collection and artifacts should be updated. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_normalizes_doi","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_true_fails"," - Given a canonical collection with a published version and an unpublished version where is_auto_version is True, - creating another unpublished collection version where is_auto_version is True will fail. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__invalid_input_metadata_copy"," - Test case to verify that a KeyError is raised when passing invalid input metadata - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_sanitized_ok"," - The dataset artifact metadata can be updated with sanitized values. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_nonexistent_collection_403","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_fails_with_extra_fields","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_with_collection_version_id_403","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_no_auth_401","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_positive","" -"passed","Thu Oct 03 15:32:45 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","443","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_request_multi_primary_dims_only_with_compare__returns_200_and_correct_response","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__rds_skipped","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","21","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all-input_cell_counts_df3-expected_cell_counts_df3-input_gene_expr_df3-expected_gene_expr_df3]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct - rolled up values. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","3","tests.unit.processing","test_spatial_assets_utils","","","","test__create_deep_zoom_assets_exception","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_error_cause","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_revision_with_no_previous_version","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__prerelease_release_version__returns_true","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters76]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__upload_assets_failure"," - Test upload assets to S3 when the upload fails - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset__ok","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_unauthorized__403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters93]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_remove_doi_deletes_metadata","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_4","revision_of contains the id to their published counterpart" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__elete_many_from_s3_error","Check that delete_many_from_s3 errors are logged but do not raise exceptions." -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters19]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters23]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_published_collection_fail"," - Replacing a dataset that belongs to a published collection should fail - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__not_download_validate","Check that file in the artifact bucket are not delete if error_step is not download-validate." -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_with_dataset_no_metadata"," - GET collection should work when the collection has datasets with no metadata. - This happens when the dataset did not complete ingestion yet. - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_without_error_cause","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_pos__do_not_publish_list","Run method when revision is skipped via do_not_publish_list." -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_published_collection_version_for_published_collection_is_none"," - An unpublished collection should not be obtained using get_collection - Instead, `get_collection_version` should be used - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters2]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__dataset_not_in_collection__404"," - Trying to publish a dataset belonging to a different collection raises a 404 - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.utils","test_api_key","TestAPIKey","","","test_generate","" -"passed","Thu Oct 03 15:33:55 GMT 2024","Thu Oct 03 15:33:56 GMT 2024","1250","tests.unit.wmg_processing","test_expression_summary_default","ExpressionSummaryDefaultTests","","","test_expression_summary_default","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","8","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_raw_h5ad","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters56]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-.com]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test_link_public_collection__403","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_delete_collection_version_ok"," - A collection version can be deleted using `delete_collection_version` - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters48]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters30]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters86]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","2","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_revision","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_with_no_datasets","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_false","" -"passed","Thu Oct 03 15:34:54 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","22909","tests.unit.processing","test_handle_error","","","","test_non_migration_event_triggers_slack","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_id_super__OK"," - Processing starts when an update of a dataset is uploaded by its ID by a super curator - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_same_doi_publisher_metadata_updated_ok"," - When publishing a private collection - and there is no change in DOI - publisher metadata should be - updated if the deposited date is after the created at date of the corresponding collection. - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","18","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_cxg","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters66]","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:33:05 GMT 2024","5962","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_marker_genes_cube__returns_correct_all_markers","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","32","tests.unit.backend.layers.business","test_business","TestGetEntitiesBySchema","","","test_get_latest_published_collection_versions_by_schema"," - Test fetching index of most recently published collection versions with datasets matching a given - CxG schema version - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[55-30]"," - Test the cropping method to ensure the image is cropped to a square - " -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_query_key_not_specified_in_api_spec_returns_400","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Not_Owner","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_version_from_canonical_unpublished_ok"," - `get_collection_version_from_canonical` retrieves the unpublished version connected - to the canonical collection, if no published version is available - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_no_custom_order_ok"," - The order of the datasets in a collection version is the default cell count, descending. - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[raw_data-http://somewhere.org/path/?abcd=123]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__remove_collection__consortia__OK","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","42","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_and_is_in_env_and_use_env_is_set_we_use_env","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters83]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ2-dp-test-ingest-process-fake_dataset_id]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters97]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","20","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__links__OK","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_6","revision_of contains None if the collection is unpublished" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__giant_matrix_returns_false_early","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_with_collection_201","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","19","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_removed_datasets__OK"," - Publish a revision with delete datasets. - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","23","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__obs_and_var_index_names_specified_doesnt_exist_raises_exception","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_status_validation_message_ok"," - The dataset validation message can be updated using `update_dataset_status` - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[lab_website-http://somewhere.org/path/?abcd=123]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","20","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_unbpublished_revision__OK","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_no_datasets","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","9","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_h5ad","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","41","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_existing_secret_returns_value","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__PENDING","" -"passed","Thu Oct 03 15:36:43 GMT 2024","Thu Oct 03 15:36:45 GMT 2024","2003","tests.unit.backend.cellguide.pipeline","test_gpt_descriptions","TestGptDescriptionGenerator","","","test__gpt_seo_description_generator","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","42","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_but_is_in_env_and_use_env_is_set_we_use_env","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_datasets_nonexistent_collection_4xx","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters59]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters44]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","27","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision__403"," - Starting a revision on a revision. - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__SUCCESS","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","12","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_ndarray_to_cxg_dense_array__writes_successfully","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_with_blocked_issues","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_sorts_consortia","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__release_only_prerelease_properly_formatted_semvar__returns_false","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-.com]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_invalid_consortia","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_wrong_status_fail"," - Calling `ingest_dataset` and specifying an existing dataset should fail if the dataset is not in the - final status - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","13","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_new_dataset__OK"," - Publish a revision with new datasets. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.common","test_common","","","","test_remove_duplicate_dataset_assets_no_duplicates","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","387","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__filter_request_with_nonempty_criteria__excludes_comma_delimited_ethnicity_values","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_logger","","","","test_log_suppressed__missed","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_not_owner__403","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_private","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","5","tests.unit.backend.layers.api","test_app","TestAPI","","","test__api_index__returns_200","If this fails then the server does not work" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_unpublished_collection_ok"," - A dataset can be replaced from a collection version by calling `ingest_dataset` - and specifying an existing dataset_version_id - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters79]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__no_auth","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__can_publish_non_owned_collection_as_super_curator","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_set_dataset_metadata_ok"," - The dataset metadata can be set using `set_dataset_metadata` - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","520","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__query_request_with_compare_by_ethnicity__excludes_comma_delimited_ethnicity_values","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_generate_dataset_citation","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection__OK","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses_0","" -"passed","Thu Oct 03 15:32:13 GMT 2024","Thu Oct 03 15:32:13 GMT 2024","29","tests.unit.wmg_processing","test_cell_type_ancestors","CellTypeAncestorTests","","","test_cell_type_ancestors","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order__OK","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_403","" -"passed","Thu Oct 03 15:32:29 GMT 2024","Thu Oct 03 15:32:29 GMT 2024","399","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_all_indexed_dims_multi_valued__returns_correct_result","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-://]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection__403","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_no_assets","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.common","test_citation","TestCitation","","","test__format_citation","" -"passed","Thu Oct 03 15:32:21 GMT 2024","Thu Oct 03 15:32:22 GMT 2024","1230","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test__pipeline_fails_if_census_schema_version_unsupported","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection_options__no_allow","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-https://]","" -"passed","Thu Oct 03 15:32:53 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","6035","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_expression_summary_default_cube__returns_correct_results","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection__OK","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_all_datasets_ok"," - All dataset that belong to a published collection can be retrieved with `get_all_mapped_datasets` - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_ok"," - The dataset artifact metadata can be updated using `update_dataset_artifact_metadata` - " -"passed","Thu Oct 03 15:36:52 GMT 2024","Thu Oct 03 15:36:58 GMT 2024","5717","tests.unit.backend.cellguide.pipeline","test_metadata_generator","TestMetadataGenerator","","","test__tissue_metadata_generator","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_dataset_not_owner__403","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__valid_input_metadata_copy"," - Test case for verifying the required metadata is present - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","19","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_unpublished_collection_versions_from_canonical"," - Unpublished Collection versions can be retrieved from a canonical Collection - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","168","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_total_cell_count_per_cell_type","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters49]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ1-dp-test-stack-ingest-process-fake_dataset_id]","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","32","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_unknown_secret_raises_exception","" -"passed","Thu Oct 03 15:34:02 GMT 2024","Thu Oct 03 15:34:02 GMT 2024","34","tests.unit.wmg_processing","test_filter_relationships","FilterRelationshipsTests","","","test_filter_relationships","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","15","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_nonexistent_collection__4xx","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__release_only_misformatted_version__returns_false","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters26]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","3","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__published_with_revision","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters36]","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","15","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__non_h5ad_raises_exception","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_rds_status_0","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","114","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_same_doi_publisher_metadata_updated_ok"," - When publishing a revision - and there is no change in DOI - publisher metadata should be updated - if the deposited date is after the revised at or published at date of the corresponding collection. - " -"skipped","Thu Oct 03 15:32:22 GMT 2024","Thu Oct 03 15:32:22 GMT 2024","0","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test_pipeline_creates_files"," - Test the pipeline successfully copies from mock s3, loads corpus and correctly builds cube/cell_ordering files - and correctly uploads files to mock s3 - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","12","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__sparse_array_only_store_nonzeros_empty_array","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__401_old_token","The old token fails to authenticate" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","18","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_tombstoned_collection"," - A tombstoned Collection's versions can only be obtained if the `get_tombstoned` flag is explicitly set to True - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDatasetCurators","","","test__cancel_dataset_download__202_user_not_collection_owner_as_super_curator","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__Super_Curator","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_published_collection_fail__dataset_status_pending"," - Updating a collection version with a DOI change IF there is a dataset in non-finalized status should fail - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_invalid_dataset_fail"," - Attempting to set the order of the datasets in a collection version with a list that contains an invalid - dataset should fail. - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","2","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_noncanonical_X_and_raw_X","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision_nonexistent__403"," - Start a revision on a non-existing collection. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","1","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_api_fetch_calls"," - Mocks API key for NCBI requests, checks call counts and the correct external API calls. - Will break if the external API call is down! - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","41","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions__200","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_status__403","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_unpublished_dataset__202"," - Reuploads an unpublished dataset - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__dataset_meta__404","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_fails_on_mismatching_dataset_schema_versions"," - `publish_collection_version` should fail if called on a collection version with datasets that have mismatching - schema versions - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters81]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__user_not_logged_in","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","64","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_all_datasets_200","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__missing_collection_id__raises_error","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query4-expected_sanitized_query4]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters55]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_remove_prefix","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_revision_restoring_previously_published_dataset","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_partial_data__OK","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_public_collection_fields","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_published_collection_verify_body_is_reshaped_correctly__OK","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters105]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","12","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__raw_h5ad_updated","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__validate_with_invalid_s3_uri__returns_none","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_public_collection_verify_fix_consortia_sort_order_OK","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","12","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_get_default_sort__OK","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__no_auth"," - Calling PUT /datasets/:dataset_id should fail with 401 Unauthorized if the user is not authenticated - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","22","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_user_collections_for_index"," - The `my-collections/index` endpoint should return all public collections and the private - collections the user has WRITE access to. Curators can see all public collectoins and private collections where - they are the owner. Super Curators can see all public and private collections. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_dataset_versions","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_version_from_canonical_published_ok"," - `get_collection_version_from_canonical` retrieves the active published version connected - to the canonical collection, when available - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","3","tests.unit.processing","test_processing","ProcessingTest","","","test_process_cxg_success","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__404","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_artifact_type_doesnt_match_regex","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","16","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_cxg__with_spatial_deepzoom_assets","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth_visibility_private__403","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-://]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters50]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","34","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_prior_published_versions_for_dataset"," - Given a canonical dataset id, return all its DatasetVersions that have been part of published CollectionVersions - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_api_double_calls","Checks that, if a gene fails on the first ID search, ncbi_provider will search again (with gene name)" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_register_pos","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_cannot_be_parsed"," - Asserts an CrossrefParseException if the GET request succeeds but cannot be parsed - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_published","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters39]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test_from_link__403"," - Calling PUT /datasets/:dataset_id should fail if version IDs are used for unpublished collections or - for referencing datasets - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__restore_previous_collection_version__no_previous_versions"," - Test restoring a previous version of a collection fails when there are no previous versions - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_new_collection_no_doi_crossref_not_checked_ok"," - When publishing a new collection without a DOI, no Crossref check should be made. - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_migrate_private_collection","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_invalid_collection__403","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_public_dataset__403","cannot reupload a public published dataset" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","18","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_published_version_by_collection_id_if_revision"," - When there is a revision of a published collection, GET /collections/:collection_id retrieves: - 1. the published version given the canonical collection_id - 2. the revision if given the version_id - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__by_collection_version_id","" -"passed","Thu Oct 03 15:36:45 GMT 2024","Thu Oct 03 15:36:52 GMT 2024","6954","tests.unit.backend.cellguide.pipeline","test_metadata_generator","TestMetadataGenerator","","","test__cell_metadata_generator","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_same_doi_publisher_metadata_not_updated_ok"," - When publishing a private collection - and there is no change in DOI - publisher metadata should not - be updated if the deposited date is before the created at date of the corresponding collection. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_published_collection_fail"," - Updating a collection version that is published should fail - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__file_SERVER_ERROR"," - `get_dataset_asset` should throw 500 if url or file_size aren't returned from the server - " -"passed","Thu Oct 03 15:32:57 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","2057","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_existing_deleted_secret_raises_exception","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","0","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_convert_color_to_hex_format","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_missing_datasets__400","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_info_with_id"," - Successfully calls NCBIProvider fetch and search functions with a parameter of only gene ID - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_tombstoned_collection__410","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_invalid_title_error"," - Attempting to update a dataset with an invalid title raises an exception. - " -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","6","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_with_errors","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__published_doi_used_if_exists_for_preprint","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__delete_public_dataset_returns__405","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_is_auto_version_succeeds"," - Given a canonical collection with a published version and no unpublished versions, - creating an unpublished collection version where is_auto_verison is True will succeed. - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__can_publish_owned_collection","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","38","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_unfiltered_ok"," - All the collection versions for all collections should be returned by `get_collections`, including published, - unpublished, and all owners. - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","0","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_checker"," - GeneChecker successfully creates a dictionary of gene names to gene IDs, - checks validity of gene names, and returns ensembl ID for a gene name. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters17]","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_enum","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","10","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__dense_array_writes_successfully","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","1","tests.unit.processing.schema_migration","test_error_wrapper","","","","test_error_wrapper","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","34","tests.unit.backend.layers.api","test_portal_api","TestDeleteRevision","","","test__revision_deleted__204"," - Delete a collection under revision. - " -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","7","tests.unit.processing","test_process_validate","ProcessingTest","","","test_process_download_validate_success"," - ProcessDownloadValidate should: - 1. Download the h5ad artifact - 2. set validation status to VALID - 3. Set upload status to UPLOADED - 4. set h5ad status to UPLOADED - 5. upload the original file to S3 - 6. upload the labeled file to S3 - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_unauthenticated__401","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","13","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_data_submission_policy_version__OK"," - Checks data submission policy is correctly saved on publish of a revision. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_parses_authors_and_dates_correctly","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","4","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset[True]","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_returns_id_on_success","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_private_collection_fields","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","2","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection_options__allow","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@place.]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","24","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_dataframe_to_cxg_array__writes_successfully","" -"passed","Thu Oct 03 15:33:11 GMT 2024","Thu Oct 03 15:33:12 GMT 2024","303","tests.unit.backend.wmg","test_query","QueryPrimaryFilterDimensionsTest","","","test__single_dimension__returns_all_dimension_and_terms","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth__OK","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_invalid_data_submission_policy_version__400"," - Checks for failure on submit of a data submission policy version that is not a valid version. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.common","test_doi","TestDoi","","","test__clean_doi","" -"passed","Thu Oct 03 15:32:38 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","6016","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__markers_returns_200_and_empty_dictionary_for_bad_celltypes","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__upload_assets"," - Test upload assets to S3 - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[@place.com]","" -"passed","Thu Oct 03 15:32:29 GMT 2024","Thu Oct 03 15:32:29 GMT 2024","406","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_all_indexed_dims_single_value__returns_correct_result","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_add_dataset_artifact_wrong_type_fail"," - Adding a dataset artifact with an unsupported type should fail - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_consortia","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","0","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_rel_path","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","443","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__filter_request_with_empty_criteria__excludes_comma_delimited_ethnicity_values","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","42","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_all_tissues_have_all_cell_types-input_cell_counts_df0-expected_cell_counts_df0-input_gene_expr_df0-expected_gene_expr_df0]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct - rolled up values. - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__Not_Owner","" -"passed","Thu Oct 03 15:32:30 GMT 2024","Thu Oct 03 15:32:30 GMT 2024","413","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_single_and_multi_valued__returns_correct_result","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args0]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","140","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_replaced_dataset_ok"," - Publishing a version with a dataset replaced should succeed - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters47]","" -"passed","Thu Oct 03 15:33:05 GMT 2024","Thu Oct 03 15:33:11 GMT 2024","5981","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_marker_genes_cube__returns_correct_top_10_markers","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_ok"," - A collection version can be published using `publish_collection` - " -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","259","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_filter_dims__returns_valid_filter_dims","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","15","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_user_index","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[data_source-http://somewhere.org/path/?abcd=123]","" -"passed","Thu Oct 03 15:32:44 GMT 2024","Thu Oct 03 15:32:44 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_missing_gene__request_returns_400","" -"passed","Thu Oct 03 15:32:10 GMT 2024","Thu Oct 03 15:32:10 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_no_issues","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_doi_not_in_crossref","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","0","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_register_neg","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_fails_if_collection_not_exists"," - A collection version can only be created on an existing collection - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","2","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__401","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection_verify_consortia_sorted__OK_2","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__OK","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","15","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__can_retrieve_created_collection","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_only_private_collections_with_auth__OK","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[protocol-http://somewhere.org/path/?abcd=123]","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","15","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_dataset_by_version_id"," - Calling DELETE /collections/:collection_id/datasets/:dataset_id should return a 403 in all cases with auth - credentials, and a 401 without auth credentials - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","107","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_dense_using_feature_name_var_index","" -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","49","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_shape","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","34","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__start_revision_of_a_collection__201"," - Start a revision of a collection. - " -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","1","tests.unit.backend.layers.utils","test_json","TestCuratorJSONEncoder","","","test_datetime_with_millis","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_index_with_ontology_expansion","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters4]","" -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_timedelta","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_checker_call"," - Successfully calls GeneChecker if called with only a name parameter - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","39","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_revision_collection_by_collection_version_id","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__Not_Owner"," - Calling PUT /datasets/:dataset_id should fail with 403 Unauthorized - if the authenticated user is not the owner of a collection - " -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_private_collection_version__ok","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_new_dataset_in_revision__ok","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_dataset_published_at_with_new_dataset_ok"," - When publishing a collection that contains a new dataset, `published_at` for the new dataset should be updated - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_published_dataset_during_revision__202"," - Reupload a published dataset during a revision - " -"passed","Thu Oct 03 15:32:47 GMT 2024","Thu Oct 03 15:32:47 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi_is_not_CURIE_reference__BAD_REQUEST","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_revision_dataset__ok","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_empty_event","" -"skipped","Thu Oct 03 15:35:21 GMT 2024","Thu Oct 03 15:35:21 GMT 2024","0","tests.unit.backend.cellguide.pipeline","test_computational_marker_genes","MarkerGeneCalculatorTests","","","test__marker_gene_calculation","" -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_5","revision_of contains None if the collection is public" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","17","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_does_not_call_crossref_in_test","" -"passed","Thu Oct 03 15:32:48 GMT 2024","Thu Oct 03 15:32:48 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_owner_202","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","3","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_from_s3_uri"," - Call process download using an s3 uri - " -"passed","Thu Oct 03 15:32:59 GMT 2024","Thu Oct 03 15:32:59 GMT 2024","1","tests.unit.backend.layers.utils","test_json","TestCuratorJSONEncoder","","","test_datetime","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__published_no_revision","" -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","23","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__no_copy_if_var_index_name_already_in_columns","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__202","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__bad_link__400","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters29]","" -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails"," - Asserts a CrossrefFetchException if the GET request fails for any reason - " -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","6","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__error_if_missing_raw_h5ad","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_cxg","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","35","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_unpublished_ok"," - If published filter flag is False, only unpublished collections should be returned - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_status_for_uploaded_dataset_ok"," - Calling `get_dataset_status` should yield the processing status - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters33]","" -"passed","Thu Oct 03 15:34:26 GMT 2024","Thu Oct 03 15:34:26 GMT 2024","0","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_check_datasets_no_errors","positive test case for check_datasets method." -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-google]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters32]","" -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","21","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_gene_expressed_in_one_tissue_but_not_other-input_cell_counts_df2-expected_cell_counts_df2-input_gene_expr_df2-expected_gene_expr_df2]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct - rolled up values. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_consortia_ok"," - A collection with consortia can be created using `create_collection` - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-google.com]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args4]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_as_non_autorized__401"," - Publish a collection as a non authenticated user returns 403 - " -"passed","Thu Oct 03 15:32:46 GMT 2024","Thu Oct 03 15:32:46 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_2","The 'revising_in' attribute is None for collections which lack a revision" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_version__public__403","" -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_public_collection_405","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[\x00some data]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_private_collection_list","" -"passed","Thu Oct 03 15:33:11 GMT 2024","Thu Oct 03 15:33:11 GMT 2024","251","tests.unit.backend.wmg","test_query","QueryPrimaryFilterDimensionsTest","","","test__multiple_dimensions__returns_all_dimensions_and_terms_as_tuples","" -"passed","Thu Oct 03 15:32:39 GMT 2024","Thu Oct 03 15:33:38 GMT 2024","59269","tests.unit.wmg_processing","test_expression_summary_and_cell_counts","ExpressionSummaryAndCellCountsTests","","","test_expression_summary_and_cell_counts","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters80]","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","263","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_term_vs_label_colors","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters88]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","30","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_revision__ok","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","1","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata2-memory_settings2-expected2]","" -"passed","Thu Oct 03 15:35:17 GMT 2024","Thu Oct 03 15:35:17 GMT 2024","3","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_from_dropbox_uri"," - Call process download using a dropbox uri - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","41","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_published_ok"," - If published filter flag is True, only published, non-tombstoned collections should be returned - " -"passed","Thu Oct 03 15:32:49 GMT 2024","Thu Oct 03 15:32:49 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_returns_canonical_id"," - POST /datasets returns the canonical dataset id on creation. - " -"passed","Thu Oct 03 15:34:29 GMT 2024","Thu Oct 03 15:34:29 GMT 2024","108","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_dense","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters95]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_deletion_for_private_collection"," - Updated Dataset assets and rows in private Collection should not be deleted until after Collection is deleted - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[raw_data-https://www.google.com]","" -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_public_collection_error"," - Attemping to update a dataset in a public collection raises an exception. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","3","tests.unit.backend.layers.api","test_version","TestVersion","","","test_get","" -"passed","Thu Oct 03 15:34:27 GMT 2024","Thu Oct 03 15:34:27 GMT 2024","1","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__non_owner__raises_error","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters60]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_private_with_no_previous_version","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 2024","3","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_id_owner__OK"," - Processing starts when an update of a dataset is uploaded by its ID by the collection owner. - " -"passed","Thu Oct 03 15:32:51 GMT 2024","Thu Oct 03 15:32:51 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_remove_dataset_from_published_collection_fail"," - Removing a dataset from a published collection should fail - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_collection_with_no_datasets_fail"," - Publishing a collection version with no datasets should fail - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-google]","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_hires"," - Test that _fetch_image returns the hires image when fullres is not present. - " -"passed","Thu Oct 03 15:32:31 GMT 2024","Thu Oct 03 15:32:31 GMT 2024","21","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others-input_cell_counts_df1-expected_cell_counts_df1-input_gene_expr_df1-expected_gene_expr_df1]"," - Test that the `rollup` function correctly accumulates (or rolls up) gene-expression - values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths - grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). - - The input: - - 1. A cell type ontology subgraph consisting of 4 cell types. - - CL:0000127 - ├── CL:0000644 - ├── CL:0002605 - └── CL:0002627 - - 2. A gene expression dataframe consisting of expression numeric values for each - (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. - This value is held in a column called `n_cells_tissue`. - 6. A cell counts dataframe that consists of cell counts for each - (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. - 7. We set the `n_cells_tissue` column values to 1000 for all rows - in the gene expression dataframe. - 8. We set all other numeric column values to `1` in the gene expression dataframe. - - The expected output: - - 1. A rolled up gene expression dataframe. - 2. A rolled up cell counts dataframe. - 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe - does not change for all rows because it should not be rolled up the cell type ontology - ancestor paths. - 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) - in the rolled up gene expression dataframe hold the correct rolled up values. - 5. 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GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters51]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-https://]","" -"passed","Thu Oct 03 15:32:50 GMT 2024","Thu Oct 03 15:32:50 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_all_removed_datasets__409"," - Unable to publish a revision with no datasets. - " -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","10","tests.unit.processing","test_spatial_assets_utils","","","","test__convert_uns_to_cxg_group","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[23-11]"," - Test the cropping method to ensure the image is cropped to a square - " -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-https://]","" -"passed","Thu Oct 03 15:32:52 GMT 2024","Thu Oct 03 15:32:52 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_update_crossref_metadata_same_doi_returns_none_ok"," - The check for changes in Crossref returns None if there is no change between the existing DOI and the - DOI returned from Crossref. - " -"passed","Thu Oct 03 15:33:00 GMT 2024","Thu Oct 03 15:33:00 GMT 2024","276","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test_download","" -"passed","Thu Oct 03 15:35:20 GMT 2024","Thu Oct 03 15:35:20 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters20]","" -"passed","Thu Oct 03 15:34:28 GMT 2024","Thu Oct 03 15:34:28 GMT 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18, 19, 20, 21,\n 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32,\n 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43,\n 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,\n 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,\n 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87,\n 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109,\n 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, -128, -127, -126, -125,\n -124, -123, -122, -121, -120, -119, -118, -117, -116, -115, -114,\n -113, -112, -111, -110, -109, -108, -107, -106, -105, -104, -103,\n -102, -101, -100, -99, -98, -97, -96, -95, -94, -93, -92,\n -91, -90, -89, -88, -87, -86, -85, -84, -83, -82, -81,\n -80, -79, -78, -77, -76, -75, -74, -73, -72, -71, -70,\n -69, -68, -67, -66, -65, -64, -63, -62, -61, -60, -59,\n -58, -57, -56, -55, -54, -53, -52, -51, -50, -49, -48,\n -47, -46, -45, -44, -43, -42, -41, -40, -39, -38, -37,\n -36, 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-81, -80, -79, -78, -77, -76, -75, -74, -73,\n -72, -71, -70, -69, -68, -67, -66, -65, -64, -63, -62,\n -61, -60, -59, -58, -57, -56, -55, -54, -53, -52, -51,\n -50, -49, -48, -47, -46, -45, -44, -43, -42, -41, -40,\n -39, -38, -37, -36, -35, -34, -33, -32, -31, -30, -29,\n -28, -27, -26, -25, -24, -23, -22, -21, -20, -19, -18,\n -17, -16, -15, -14, -13, -12, -11, -10, -9, -8, -7,\n -6, -5, -4, -3, -2, -1, 0, 1, 2, 3, 4,\n 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15,\n 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26,\n 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48,\n 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70,\n 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,\n 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,\n 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,\n 126, 127, -128, -127, -126, -125, -124, -123, -122, -121, -120,\n -119, -118, -117, -116, -115, -114, -113, -112, -111, -110, -109,\n -108, -107, -106, -105, -104, -103, -102, -101, -100, -99, -98,\n -97, -96, -95, -94, -93, -92, -91, -90, -89, -88, -87,\n -86, -85, -84, -83, -82, -81, -80, -79, -78, -77, -76,\n -75, -74, -73, -72, -71, -70, -69, -68, -67, -66, -65,\n -64, -63, -62, -61, -60, -59, -58, -57, -56, -55, -54,\n -53, -52, -51, -50, -49, -48, -47, -46, -45, -44, -43,\n -42, -41, -40, -39, -38, -37, -36, -35, -34, -33, -32,\n -31, -30, -29, -28, -27, -26, -25, -24, -23, -22, -21,\n -20, -19, -18, -17, -16, -15, -14, -13, -12, -11, -10,\n -9, -8, -7, -6, -5, -4, -3, -2, -1, 0, 1,\n 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23,\n 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34,\n 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45,\n 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56,\n 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67,\n 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,\n 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100,\n 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122,\n 123, 124, 125, 126, 127, -128, -127, -126, -125, -124, -123,\n -122, -121, -120, -119, -118, -117, -116, -115, -114, -113, -112,\n -111, -110, -109, -108, -107, -106, -105, -104, -103, -102, -101,\n -100, -99, -98, -97, -96, -95, -94, -93, -92, -91, -90,\n -89, -88, -87, -86, -85, -84, -83, -82, -81, -80, -79,\n -78, -77, -76, -75, -74, -73, -72, -71, -70, -69, -68,\n -67, -66, -65, -64, -63, -62, -61, -60, -59, -58, -57,\n -56, -55, -54, -53, -52, -51, -50, -49, -48, -47, -46,\n -45, -44, -43, -42, -41, -40, -39, -38, -37, -36, -35,\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype=int8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"d9b2ef3d9373d22a","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720315,"stop":1727969720316,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"fee8399886759579","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720319,"stop":1727969720319,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6f899961ac123925","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720322,"stop":1727969720323,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"8e3b848337d29e1b","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720328,"stop":1727969720328,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"944dac709b3815bd","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720334,"stop":1727969720335,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"28df3bbbee3d8b6f","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720339,"stop":1727969720339,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"bb380ee5a415f70b","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720342,"stop":1727969720343,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"957a35a23f12a18","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720348,"stop":1727969720348,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"36f70ca131b3004e","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720354,"stop":1727969720354,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"c514541346c69fb1","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720358,"stop":1727969720358,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b258bb85b444afb0","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720361,"stop":1727969720362,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"9df25e3a646f6808","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720367,"stop":1727969720367,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"926e984107045a24","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720373,"stop":1727969720373,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"5202132f7cf8d644","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720376,"stop":1727969720377,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"46e94f4f3dd6cfc2","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720380,"stop":1727969720380,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"125c3ea2f1c3ad27","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720385,"stop":1727969720386,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"7e14fed8c837be5d","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720391,"stop":1727969720392,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"4944176181b1887","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720395,"stop":1727969720396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"80b518379318f5ea","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720398,"stop":1727969720399,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"beb651ee4e9c197","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720404,"stop":1727969720404,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"8fb0d32a29fca6bb","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720410,"stop":1727969720411,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"acec9ba82c09ee72","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720414,"stop":1727969720415,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"f72a41b75e4b9754","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720418,"stop":1727969720418,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"14ecf34363c25fbb","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720423,"stop":1727969720423,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"70137373eb06e922","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720429,"stop":1727969720430,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"d8553a83e0945ca4","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720433,"stop":1727969720433,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"3b39dcc1a51c5a69","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720436,"stop":1727969720437,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"3ed85f6becdae68b","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720442,"stop":1727969720442,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters31]","uid":"3e09bf7f04fc8570","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720448,"stop":1727969720449,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters32]","uid":"c473d868561fc34f","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1727969720452,"stop":1727969720453,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint64', 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408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 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\ No newline at end of file diff --git a/22182/data/test-cases/1f588f8abec37412.json b/22182/data/test-cases/1f588f8abec37412.json deleted file mode 100644 index 490dcdc265bf..000000000000 --- a/22182/data/test-cases/1f588f8abec37412.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"1f588f8abec37412","name":"test__rollup[no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all-input_cell_counts_df3-expected_cell_counts_df3-input_gene_expr_df3-expected_gene_expr_df3]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"31b9ca75c80d7f71de070fae47c3e8e4","time":{"start":1727969551408,"stop":1727969551429,"duration":21},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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columns]"},{"name":"name","value":"'no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all'"}],"links":[],"hidden":false,"retry":false,"extra":{"severity":"normal","retries":[],"categories":[],"history":{"statistic":{"failed":0,"broken":0,"skipped":0,"passed":239,"unknown":0,"total":239},"items":[{"uid":"7fdc539ff7e45e89","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22178//#testresult/7fdc539ff7e45e89","status":"passed","time":{"start":1727969457980,"stop":1727969457999,"duration":19}},{"uid":"c38d09ff283ba342","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22176//#testresult/c38d09ff283ba342","status":"passed","time":{"start":1727969342044,"stop":1727969342063,"duration":19}},{"uid":"176875e23203db5","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22175//#testresult/176875e23203db5","status":"passed","time":{"start":1727963758965,"stop":1727963758984,"duration":19}},{"uid":"9b5869598001d54c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22174//#testresult/9b5869598001d54c","status":"passed","time":{"start":1727962681660,"stop":1727962681685,"duration":25}},{"uid":"79b328b64781d26d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22173//#testresult/79b328b64781d26d","status":"passed","time":{"start":1727962527223,"stop":1727962527243,"duration":20}},{"uid":"a217fa4eace5248f","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22171//#testresult/a217fa4eace5248f","status":"passed","time":{"start":1727914077665,"stop":1727914077689,"duration":24}},{"uid":"82e6cb75699b5a4","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22169//#testresult/82e6cb75699b5a4","status":"passed","time":{"start":1727909928133,"stop":1727909928152,"duration":19}},{"uid":"377a767d640887d3","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22164//#testresult/377a767d640887d3","status":"passed","time":{"start":1727903829091,"stop":1727903829112,"duration":21}},{"uid":"3d78d95ac5caa479","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22163//#testresult/3d78d95ac5caa479","status":"passed","time":{"start":1727902910781,"stop":1727902910801,"duration":20}},{"uid":"48fc5d36c530bf1f","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22162//#testresult/48fc5d36c530bf1f","status":"passed","time":{"start":1727902665620,"stop":1727902665639,"duration":19}},{"uid":"46c1f54dd62e1cec","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22159//#testresult/46c1f54dd62e1cec","status":"passed","time":{"start":1727900027254,"stop":1727900027274,"duration":20}},{"uid":"f7b3f2192f472dee","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22156//#testresult/f7b3f2192f472dee","status":"passed","time":{"start":1727889114468,"stop":1727889114489,"duration":21}},{"uid":"5a43787586faa1","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22153//#testresult/5a43787586faa1","status":"passed","time":{"start":1727886924543,"stop":1727886924564,"duration":21}},{"uid":"ac5b3444e1d4a130","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22154//#testresult/ac5b3444e1d4a130","status":"passed","time":{"start":1727886922023,"stop":1727886922042,"duration":19}},{"uid":"7c4c5966f89a982e","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22151//#testresult/7c4c5966f89a982e","status":"passed","time":{"start":1727874938973,"stop":1727874939006,"duration":33}},{"uid":"5fd68a9866781cb8","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22150//#testresult/5fd68a9866781cb8","status":"passed","time":{"start":1727826936624,"stop":1727826936643,"duration":19}},{"uid":"69568f4bf498dd2b","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22148//#testresult/69568f4bf498dd2b","status":"passed","time":{"start":1727819775765,"stop":1727819775783,"duration":18}},{"uid":"6b9d35f4977a77fc","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22146//#testresult/6b9d35f4977a77fc","status":"passed","time":{"start":1727817220617,"stop":1727817220635,"duration":18}},{"uid":"b877b427e0236a0c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22143//#testresult/b877b427e0236a0c","status":"passed","time":{"start":1727811775864,"stop":1727811775884,"duration":20}},{"uid":"5bac2d9f806849ee","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22141//#testresult/5bac2d9f806849ee","status":"passed","time":{"start":1727809429839,"stop":1727809429860,"duration":21}}]},"tags":[]},"source":"1f588f8abec37412.json","parameterValues":[" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n\n[5 rows x 7 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n\n[3 rows x 7 columns]","'no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all'"]} \ No newline at end of file diff --git a/22182/data/test-cases/1f6558ad5bb1c215.json 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\ No newline at end of file diff --git a/22182/data/test-cases/211d599cf76b85cd.json b/22182/data/test-cases/211d599cf76b85cd.json deleted file mode 100644 index c4a3e7cd34e6..000000000000 --- a/22182/data/test-cases/211d599cf76b85cd.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"211d599cf76b85cd","name":"test_create_collection_version_multiple_auto_versions_false_fails","fullName":"tests.unit.backend.layers.business.test_business.TestCollectionOperations#test_create_collection_version_multiple_auto_versions_false_fails","historyId":"451a09e6b9a19d06045a9d8f0db33509","time":{"start":1727969572077,"stop":1727969572089,"duration":12},"description":"\n Given a canonical collection with a published version and an unpublished version with is_auto_version == False,\n creating an unpublished collection version where is_auto_verison is False will fail.\n ","descriptionHtml":"
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\ No newline at end of file diff --git a/22182/data/test-cases/2d2de1f80625e6f5.json b/22182/data/test-cases/2d2de1f80625e6f5.json deleted file mode 100644 index 5fd9fded7015..000000000000 --- a/22182/data/test-cases/2d2de1f80625e6f5.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"2d2de1f80625e6f5","name":"test__rollup[no_compare_dim_all_tissues_have_all_cell_types-input_cell_counts_df0-expected_cell_counts_df0-input_gene_expr_df0-expected_gene_expr_df0]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"f8f8ae804e63395ddf252e5ce0694c9b","time":{"start":1727969551196,"stop":1727969551238,"duration":42},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
\n","status":"passed","flaky":false,"newFailed":false,"newBroken":false,"newPassed":false,"retriesCount":0,"retriesStatusChange":false,"beforeStages":[{"name":"patch_all","time":{"start":1727969548250,"stop":1727969548250,"duration":0},"status":"passed","steps":[],"attachments":[],"parameters":[],"shouldDisplayMessage":false,"stepsCount":0,"attachmentsCount":0,"hasContent":false,"attachmentStep":false}],"testStage":{"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. 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Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. 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408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 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array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 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602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 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\ No newline at end of file diff --git a/22182/data/test-cases/6224de69cb8457dd.json b/22182/data/test-cases/6224de69cb8457dd.json deleted file mode 100644 index c327f608333a..000000000000 --- a/22182/data/test-cases/6224de69cb8457dd.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"6224de69cb8457dd","name":"test__rollup[no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others-input_cell_counts_df1-expected_cell_counts_df1-input_gene_expr_df1-expected_gene_expr_df1]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"4f34d24473a3e97e04a717c5f4435ddc","time":{"start":1727969551281,"stop":1727969551302,"duration":21},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"expected_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000169429 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000085265 ... 1000\n9 ENSG00000169429 ... 1000\n\n[10 rows x 7 columns]"},{"name":"input_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"input_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000169429 ... 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n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 240\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000169429 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000085265 ... 1000\n9 ENSG00000169429 ... 1000\n\n[10 rows x 7 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000169429 ... 1000\n\n[6 rows x 7 columns]","'no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others'"]} \ No newline at end of file diff --git a/22182/data/test-cases/6261b06d796ff49c.json b/22182/data/test-cases/6261b06d796ff49c.json deleted file mode 100644 index 9e19ae743100..000000000000 --- a/22182/data/test-cases/6261b06d796ff49c.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"6261b06d796ff49c","name":"test__revision_not_owner__403","fullName":"tests.unit.backend.layers.api.test_portal_api.TestRevision#test__revision_not_owner__403","historyId":"f2ccfd3184ddb07f51dc620a7802b507","time":{"start":1727969570687,"stop":1727969570701,"duration":14},"description":"\n Start a revision on a collection as a non-owner.\n ","descriptionHtml":"
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\ No newline at end of file diff --git a/22182/data/test-cases/79ab200a8d8dde9c.json b/22182/data/test-cases/79ab200a8d8dde9c.json deleted file mode 100644 index b7389416eb02..000000000000 --- a/22182/data/test-cases/79ab200a8d8dde9c.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"79ab200a8d8dde9c","name":"test__rollup[no_compare_dim_all_tissues_have_all_cell_types_except_root_cell_type-input_cell_counts_df5-expected_cell_counts_df5-input_gene_expr_df5-expected_gene_expr_df5]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"5e7c3babaa5f3f4466cb1a158c93146e","time":{"start":1727969551542,"stop":1727969551562,"duration":20},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
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array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 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\ No newline at end of file diff --git a/22182/data/test-cases/8e58c4600768f2dc.json b/22182/data/test-cases/8e58c4600768f2dc.json deleted file mode 100644 index b4a7e68c0359..000000000000 --- a/22182/data/test-cases/8e58c4600768f2dc.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"8e58c4600768f2dc","name":"test__rollup[with_ethnicity_compare_dim_on_single_tissue-input_cell_counts_df4-expected_cell_counts_df4-input_gene_expr_df4-expected_gene_expr_df4]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"cea2ec9c99b35378700fac487d392abf","time":{"start":1727969551473,"stop":1727969551496,"duration":23},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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CL:0000127 HANCESTRO:0008 50\n multiethnic 70\n unknown 410\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"},{"name":"expected_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000085265 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000169429 ... 1000\n\n[9 rows x 8 columns]"},{"name":"input_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 unknown 300\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"},{"name":"input_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n\n[5 rows x 8 columns]"},{"name":"name","value":"'with_ethnicity_compare_dim_on_single_tissue'"}],"links":[],"hidden":false,"retry":false,"extra":{"severity":"normal","retries":[],"categories":[],"history":{"statistic":{"failed":0,"broken":0,"skipped":0,"passed":239,"unknown":0,"total":239},"items":[{"uid":"ffa83cc7224d25a4","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22178//#testresult/ffa83cc7224d25a4","status":"passed","time":{"start":1727969458043,"stop":1727969458064,"duration":21}},{"uid":"b41890fa67f51a3b","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22176//#testresult/b41890fa67f51a3b","status":"passed","time":{"start":1727969342105,"stop":1727969342127,"duration":22}},{"uid":"7953a219886f75e6","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22175//#testresult/7953a219886f75e6","status":"passed","time":{"start":1727963759028,"stop":1727963759051,"duration":23}},{"uid":"1404d16ec5cf3748","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22174//#testresult/1404d16ec5cf3748","status":"passed","time":{"start":1727962681747,"stop":1727962681785,"duration":38}},{"uid":"9c7abec56c72f74a","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22173//#testresult/9c7abec56c72f74a","status":"passed","time":{"start":1727962527286,"stop":1727962527313,"duration":27}},{"uid":"9f6c74e8dd5ae3bd","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22171//#testresult/9f6c74e8dd5ae3bd","status":"passed","time":{"start":1727914077747,"stop":1727914077783,"duration":36}},{"uid":"5b1586f4461c6577","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22169//#testresult/5b1586f4461c6577","status":"passed","time":{"start":1727909928196,"stop":1727909928219,"duration":23}},{"uid":"d94603a0eacbf09e","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22164//#testresult/d94603a0eacbf09e","status":"passed","time":{"start":1727903829155,"stop":1727903829177,"duration":22}},{"uid":"aa7a65d26df190ce","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22163//#testresult/aa7a65d26df190ce","status":"passed","time":{"start":1727902910843,"stop":1727902910866,"duration":23}},{"uid":"d9d0ab45b1a6a67b","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22162//#testresult/d9d0ab45b1a6a67b","status":"passed","time":{"start":1727902665683,"stop":1727902665706,"duration":23}},{"uid":"b8410afc601605cc","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22159//#testresult/b8410afc601605cc","status":"passed","time":{"start":1727900027318,"stop":1727900027342,"duration":24}},{"uid":"4f5336fe7fc3ec8c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22156//#testresult/4f5336fe7fc3ec8c","status":"passed","time":{"start":1727889114533,"stop":1727889114557,"duration":24}},{"uid":"b4d63d4ab8bb7993","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22153//#testresult/b4d63d4ab8bb7993","status":"passed","time":{"start":1727886924610,"stop":1727886924635,"duration":25}},{"uid":"95240eed15fa48b9","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22154//#testresult/95240eed15fa48b9","status":"passed","time":{"start":1727886922084,"stop":1727886922107,"duration":23}},{"uid":"159f4af02545e11e","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22151//#testresult/159f4af02545e11e","status":"passed","time":{"start":1727874939076,"stop":1727874939114,"duration":38}},{"uid":"90a9dc52f3cf03f9","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22150//#testresult/90a9dc52f3cf03f9","status":"passed","time":{"start":1727826936687,"stop":1727826936709,"duration":22}},{"uid":"a23e698584468bc5","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22148//#testresult/a23e698584468bc5","status":"passed","time":{"start":1727819775826,"stop":1727819775848,"duration":22}},{"uid":"dd609fc8daba6eb3","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22146//#testresult/dd609fc8daba6eb3","status":"passed","time":{"start":1727817220676,"stop":1727817220700,"duration":24}},{"uid":"40f7e609493f832f","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22143//#testresult/40f7e609493f832f","status":"passed","time":{"start":1727811775928,"stop":1727811775951,"duration":23}},{"uid":"930bcdbe1f823af3","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22141//#testresult/930bcdbe1f823af3","status":"passed","time":{"start":1727809429906,"stop":1727809429931,"duration":25}}]},"tags":[]},"source":"8e58c4600768f2dc.json","parameterValues":[" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 HANCESTRO:0008 50\n multiethnic 70\n unknown 410\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000085265 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000169429 ... 1000\n\n[9 rows x 8 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 unknown 300\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n 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array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 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\ No newline at end of file diff --git a/22182/data/test-cases/f85d27dc9cea1439.json b/22182/data/test-cases/f85d27dc9cea1439.json deleted file mode 100644 index 80f0bd09b853..000000000000 --- a/22182/data/test-cases/f85d27dc9cea1439.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"f85d27dc9cea1439","name":"test_create_collection_version_multiple_auto_versions_fails","fullName":"tests.unit.backend.layers.business.test_business.TestCollectionOperations#test_create_collection_version_multiple_auto_versions_fails","historyId":"92732c2fad95db0a2d8a4cfc743d219a","time":{"start":1727969572063,"stop":1727969572075,"duration":12},"description":"\n Given a canonical collection with a published version and an unpublished version with is_auto_version == True,\n creating another unpublished collection version where is_auto_verison is False will fail.\n ","descriptionHtml":"
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\ No newline at end of file diff --git a/22182/data/test-cases/f9834a76ea62473e.json b/22182/data/test-cases/f9834a76ea62473e.json deleted file mode 100644 index 3484c1fe8ecd..000000000000 --- a/22182/data/test-cases/f9834a76ea62473e.json +++ /dev/null @@ -1 +0,0 @@ -{"uid":"f9834a76ea62473e","name":"test__rollup[no_compare_dim_gene_expressed_in_one_tissue_but_not_other-input_cell_counts_df2-expected_cell_counts_df2-input_gene_expr_df2-expected_gene_expr_df2]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"8829462a338d361e56853010e16ef7d1","time":{"start":1727969551345,"stop":1727969551366,"duration":21},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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precision'}}"],"tags":[]},{"name":"test_type_inference[parameters86]","uid":"86ac58db549f7ca2","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720681,"stop":1727969720682,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 NaN\n2 2\ndtype: category\nCategories (2, uint64): [0, 2], 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'categorical'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_rollback_private_collection","uid":"adfe99b0a0577be8","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720104,"stop":1727969720111,"duration":7},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_type_inference[parameters35]","uid":"ecd8bdf381cad173","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720463,"stop":1727969720464,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 -128.0\n1 -127.0\n2 -126.0\n3 -125.0\n4 -124.0\n ... \n1123 995.0\n1124 996.0\n1125 997.0\n1126 998.0\n1127 999.0\nLength: 1128, dtype: float32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters98]","uid":"9f1733bfabcaf3a3","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720732,"stop":1727969720732,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'throws': }"],"tags":[]},{"name":"test_type_inference[parameters50]","uid":"80396c2be942dd63","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720519,"stop":1727969720520,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array(['a', 'b', 'c'], dtype=object), 'expected_encoding_dtype': dtype(', 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_anndata_colors_to_cxg_colors","uid":"ed3fc98cdbe7efd1","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969666921,"stop":1727969667305,"duration":384},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_type_inference[parameters0]","uid":"5fd9481cb13993ff","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720300,"stop":1727969720300,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([False, True, False, True]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'boolean'}}"],"tags":[]},{"name":"test_has_valid_artifact_statuses__invalid_rds_status_1","uid":"4cfaf826c2dfdae7","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969667983,"stop":1727969667986,"duration":3},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_check_datasets_no_errors","uid":"28adc8b92cb4ffb3","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969666819,"stop":1727969666819,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_migrate_private_collection","uid":"829a5d1a57eb371a","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969666541,"stop":1727969666542,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_log_suppressed__missed","uid":"88fc7961faee9982","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969717347,"stop":1727969717348,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test__fetch_image_hires","uid":"b988443207bee05b","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720203,"stop":1727969720203,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test__process_and_flip_image","uid":"be7b344be3c6cf93","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720212,"stop":1727969720217,"duration":5},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test__create_h5ad_data_file__reads_anndata_successfully","uid":"b1a8c9b3fae8bb3a","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969669113,"stop":1727969669137,"duration":24},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_has_valid_artifact_statuses__invalid_cxg_status_0","uid":"eb51446dfde3ea9c","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969667958,"stop":1727969667961,"duration":3},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":[],"tags":[]},{"name":"test_type_inference[parameters97]","uid":"11f4af78f755ccfb","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720728,"stop":1727969720729,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index(['a', True, 1, [], {}], dtype='object'), 'expected_encoding_dtype': dtype(', 'expected_schema_hint': {'type': 'categorical'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"957a35a23f12a18","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720348,"stop":1727969720348,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"beb651ee4e9c197","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720404,"stop":1727969720404,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"46e94f4f3dd6cfc2","parentUid":"c39ea2695e5fa51dbf8f5e4841de7672","status":"passed","time":{"start":1727969720380,"stop":1727969720380,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 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214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 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602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 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69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 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851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 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"message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d61733de-cfb9-4b01-b20c-95c3c17a6db6", "type": "RESPONSE", "details": {"status_code": 202, "content_length": null, "response_time": 0.006123065948486328}} diff --git a/22261/data/attachments/11d60fee148c9f24.txt b/22261/data/attachments/11d60fee148c9f24.txt new file mode 100644 index 000000000000..cc8ba931c017 --- /dev/null +++ b/22261/data/attachments/11d60fee148c9f24.txt @@ -0,0 +1 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:55:26.008Z", "name": "backend.layers.business.business", "message": "ingesting dataset", "lineno": 553, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "collection_version_id": "f6be6af4-c6c5-4860-9bca-413b281dd562", "url": "http://fake.url", "current_dataset_version_id": null} diff --git a/22261/data/attachments/13e9f4160baa97b1.txt b/22261/data/attachments/13e9f4160baa97b1.txt new file mode 100644 index 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'cxguser=eyJhY2Nlc3NfdG9rZW4iOiAib3duZXIiLCAicmVmcmVzaF90b2tlbiI6ICJyYW5kb20tMTcyODM5MjA2MC44Njc5MzM1IiwgInNjb3BlIjogIm9wZW5pZCBwcm9maWxlIGVtYWlsIG9mZmxpbmUiLCAiZXhwaXJlc19pbiI6IDMsICJ0b2tlbl90eXBlIjogIkJlYXJlciIsICJleHBpcmVzX2F0IjogM30='} +headers - {'host': 'localhost'} +headers - {'host': 'localhost'} +headers - {'host': 'localhost'} +headers - {'host': 'localhost'} diff --git a/22261/data/attachments/14144737bfa691cb.txt b/22261/data/attachments/14144737bfa691cb.txt new file mode 100644 index 000000000000..b963756fa467 --- /dev/null +++ b/22261/data/attachments/14144737bfa691cb.txt @@ -0,0 +1,16 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': c8128f99-3224-4106-9855-be8a0b58db31, 'url': 'http://fake.url', 'current_dataset_version_id': None} +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': c8128f99-3224-4106-9855-be8a0b58db31, 'url': None, 'current_dataset_version_id': ee60a8a1-c999-4b9e-bb66-2fbffb0ffedc} +INFO processing:dataset_metadata_update.py:333 Main: No raw h5ad update required +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [db6b4d0a-3d8a-4f56-9e2c-1f27f6a656b2/raw.h5ad] to s3://artifact_bucket/db6b4d0a-3d8a-4f56-9e2c-1f27f6a656b2/raw.h5ad +INFO processing:process_logic.py:93 Updated database with raw_h5ad. +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:dataset_metadata_update.py:337 Main: Starting thread for h5ad update +INFO processing:dataset_metadata_update.py:357 Main: Starting thread for rds update +INFO processing:dataset_metadata_update.py:380 Main: Starting thread for cxg update +INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22261/data/attachments/146b698d64bde2ec.txt b/22261/data/attachments/146b698d64bde2ec.txt new file mode 100644 index 000000000000..2a6b032ac205 --- /dev/null +++ b/22261/data/attachments/146b698d64bde2ec.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:36.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5abe065d-6414-4581-87a6-3272890c18d8", "type": "REQUEST", "details": {"url": "/wmg/v2/query", "method": "POST", "content_length": 127}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:36.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5abe065d-6414-4581-87a6-3272890c18d8", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3236, "response_time": 0.05227780342102051}} diff --git a/22261/data/attachments/151576926aca7a24.txt b/22261/data/attachments/151576926aca7a24.txt new file mode 100644 index 000000000000..becab8a6eeed --- /dev/null +++ b/22261/data/attachments/151576926aca7a24.txt @@ -0,0 +1,6 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:55:28.008Z", "name": "root", "message": "", "lineno": 22, "pathname": "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", "dataset_version_id": "123", "collection_version_id": "456", "error": {}, "execution_id": "arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine"} +{"levelname": "INFO", "asctime": "2024-10-08T12:55:28.008Z", "name": "root", "message": "Skipping slack notification for arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine because failure is related to a schema migration", "lineno": 33, "pathname": "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:55:41.008Z", "name": "processing", "message": "Failed to update dataset processing status", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 87, in update_dataset_processing_status_to_failed\n get_business_logic().update_dataset_version_status(\n File \"/single-cell-data-portal/backend/portal/api/providers.py\", line 18, in get_business_logic\n DatabaseProvider(),\n File \"/single-cell-data-portal/backend/layers/persistence/persistence.py\", line 57, in __init__\n database_uri = CorporaDbConfig().database_uri\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 54, in __getattr__\n self.load()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 88, in load\n self.load_from_aws()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 99, in load_from_aws\n secret = AwsSecret(secret_path)\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 31, in __init__\n self._load()\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 76, in _load\n response = self.secrets_mgr.describe_secret(SecretId=self.name)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/\""} +{"levelname": "ERROR", "asctime": "2024-10-08T12:55:53.008Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url\""} +{"levelname": "ERROR", "asctime": "2024-10-08T12:55:53.008Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:01.008Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 198, in cleanup_artifacts\n delete_many_from_s3(cellxgene_bucket, object_key + \".cxg/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url\""} diff --git a/22261/data/attachments/1594a4cebaafa3f8.txt b/22261/data/attachments/1594a4cebaafa3f8.txt new file mode 100644 index 000000000000..323d27ec7e04 --- /dev/null +++ b/22261/data/attachments/1594a4cebaafa3f8.txt @@ -0,0 +1,14 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': be61e5a1-5c69-43a5-9bc7-7013837d3a0e, 'url': 'https://www.dropbox.com/s/fake_location/test.h5ad?dl=0', 'current_dataset_version_id': None} +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:26 Start download_from_source_uri +INFO processing:logger.py:28 Complete download_from_source_uri +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [440e2980-5db5-4b96-a9d4-d23b054b625f/raw.h5ad] to s3://fake_bucket_name/fake-stack/440e2980-5db5-4b96-a9d4-d23b054b625f/raw.h5ad +INFO processing:process_logic.py:93 Updated database with raw_h5ad. +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_download.py:120 {'message': 'Estimated resource requirements', 'memory_modifier': 3, 'swap_modifier': 0, 'min_vcpu': 2, 'max_vcpu': 96, 'max_swap_memory_MB': 300000, 'memory_per_vcpu': 8000, 'uncompressed_size_MB': 95.367431640625, 'max_swap': 0, 'memory': 16000, 'vcpus': 2} +INFO processing:process_download.py:200 {'JobDefinitionName': 'dp-test-fake-stack-ingest-process-440e2980-5db5-4b96-a9d4-d23b054b625f', 'Vcpus': 2, 'Memory': 16000, 'LinuxParameters': {'Swappiness': 60, 'MaxSwap': 0}} \ No newline at end of file diff --git a/22182/data/attachments/498e90c67f336d74.txt b/22261/data/attachments/15b6a8eedc827a89.txt similarity index 100% rename from 22182/data/attachments/498e90c67f336d74.txt rename to 22261/data/attachments/15b6a8eedc827a89.txt diff --git a/22261/data/attachments/15f48b5ec40d6eb8.txt b/22261/data/attachments/15f48b5ec40d6eb8.txt new file mode 100644 index 000000000000..2b5cb7e48815 --- /dev/null +++ b/22261/data/attachments/15f48b5ec40d6eb8.txt @@ -0,0 +1,3 @@ +{"levelname": "WARNING", "asctime": "2024-10-08T12:56:32.008Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} +{"levelname": "WARNING", "asctime": "2024-10-08T12:56:32.008Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} +{"levelname": "WARNING", "asctime": "2024-10-08T12:56:32.008Z", "name": "root", "message": "Type float64 will be converted to 32 bit float and may lose precision.", "lineno": 155, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/type_conversion_utils.py"} diff --git a/22261/data/attachments/167895338cd64e22.txt b/22261/data/attachments/167895338cd64e22.txt new file mode 100644 index 000000000000..0fa83324d7ee --- /dev/null +++ b/22261/data/attachments/167895338cd64e22.txt @@ -0,0 +1,15 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "backend.layers.business.business", "message": "ingesting dataset", "lineno": 553, "pathname": "/single-cell-data-portal/backend/layers/business/business.py", "collection_version_id": "421f759a-e5e0-4286-9320-da3a1e31b3fc", "url": "nothing", "current_dataset_version_id": null} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Converting local.h5ad", "lineno": 113, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.CONVERTING", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.CONVERTED", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Finished converting in 0:00:00.000509", "lineno": 119, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.UPLOADING", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating database with cxg artifact for dataset f3ca9433-a343-4a8e-8f3d-ae7c6be578b0. s3_uri is s3://fake_cxg_bucket/f3ca9433-a343-4a8e-8f3d-ae7c6be578b0.cxg/", "lineno": 109, "pathname": "/single-cell-data-portal/backend/layers/processing/process_cxg.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.UPLOADED", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Converting local.h5ad", "lineno": 113, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.CONVERTING", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.CONVERTED", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Finished converting in 0:00:00.000250", "lineno": 119, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.UPLOADING", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating database with cxg artifact for dataset f3ca9433-a343-4a8e-8f3d-ae7c6be578b0. s3_uri is s3://fake_cxg_bucket/f3ca9433-a343-4a8e-8f3d-ae7c6be578b0.cxg/", "lineno": 109, "pathname": "/single-cell-data-portal/backend/layers/processing/process_cxg.py"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:32.008Z", "name": "processing", "message": "Updating processing status", "lineno": 45, "pathname": "/single-cell-data-portal/backend/layers/processing/process_logic.py", "validation_message": null, "status_key": "cxg", "status_value": "DatasetConversionStatus.UPLOADED", "dataset_version_id": "f3ca9433-a343-4a8e-8f3d-ae7c6be578b0"} diff --git a/22261/data/attachments/181f39c5d0743774.txt b/22261/data/attachments/181f39c5d0743774.txt new file mode 100644 index 000000000000..f59208e1bd01 --- /dev/null +++ b/22261/data/attachments/181f39c5d0743774.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3391c6bf-9665-471b-ad94-f9a40d860dbd", "type": "REQUEST", "details": {"url": "/dp/v1/collections/a3b4e015-e4ab-4401-86c9-283c661992e7/order-datasets", "method": "PUT", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3391c6bf-9665-471b-ad94-f9a40d860dbd", "type": "RESPONSE", "details": {"status_code": 401, "content_length": 119, "response_time": 0.0006597042083740234}} diff --git a/22261/data/attachments/18667760bea35d61.txt b/22261/data/attachments/18667760bea35d61.txt new file mode 100644 index 000000000000..f1be12fc76e4 --- /dev/null +++ b/22261/data/attachments/18667760bea35d61.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "86c3ac96-77d7-47b7-a311-3dc7d3ed739b", "type": "REQUEST", "details": {"url": "/dp/v1/collections/4b2fac69-b166-4d3d-ba39-feb3c41df773/publish", "method": "POST", "content_length": 41}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "86c3ac96-77d7-47b7-a311-3dc7d3ed739b", "type": "RESPONSE", "details": {"status_code": 202, "content_length": 88, "response_time": 0.003932952880859375}} diff --git a/22261/data/attachments/19054b111b787468.txt b/22261/data/attachments/19054b111b787468.txt new file mode 100644 index 000000000000..74ad18b7558f --- /dev/null +++ b/22261/data/attachments/19054b111b787468.txt @@ -0,0 +1,17 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4b06340f-4670-4bd8-8cce-b58ed84e4409", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "4b06340f-4670-4bd8-8cce-b58ed84e4409", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 135, "response_time": 0.0012578964233398438}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "899bc323-4684-4cf6-a963-537d7f1849e1", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "899bc323-4684-4cf6-a963-537d7f1849e1", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 135, "response_time": 0.0007822513580322266}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3a0803b8-aa11-44fd-b26f-1bd01832a7b3", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3a0803b8-aa11-44fd-b26f-1bd01832a7b3", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 135, "response_time": 0.0008776187896728516}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "aa2a62cf-42de-4448-a129-70a1af979835", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "aa2a62cf-42de-4448-a129-70a1af979835", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0007579326629638672}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bb2c8529-e460-4b35-a3ba-934ed34c2595", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "root", "message": "", "lineno": 42, "pathname": "/single-cell-data-portal/backend/curation/api/v1/curation/collections/actions.py", "request_id": "bb2c8529-e460-4b35-a3ba-934ed34c2595", "is_published": true, "curator_name": "Not A Curator"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bb2c8529-e460-4b35-a3ba-934ed34c2595", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3, "response_time": 0.0013954639434814453}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d6f80490-1aaa-4510-a4f2-1c7de8772aa0", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "root", "message": "", "lineno": 42, "pathname": "/single-cell-data-portal/backend/curation/api/v1/curation/collections/actions.py", "request_id": "d6f80490-1aaa-4510-a4f2-1c7de8772aa0", "is_published": true, "curator_name": "John Smith"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d6f80490-1aaa-4510-a4f2-1c7de8772aa0", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 1627, "response_time": 0.003675699234008789}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "a72cf6d3-79dd-402a-a7c3-529144bda033", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "root", "message": "", "lineno": 42, "pathname": "/single-cell-data-portal/backend/curation/api/v1/curation/collections/actions.py", "request_id": "a72cf6d3-79dd-402a-a7c3-529144bda033", "is_published": false, "curator_name": "John Smith"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "a72cf6d3-79dd-402a-a7c3-529144bda033", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 786, "response_time": 0.0020780563354492188}} diff --git a/22261/data/attachments/190e6da2da2071d8.txt b/22261/data/attachments/190e6da2da2071d8.txt new file mode 100644 index 000000000000..6d5c7e3d40c6 --- /dev/null +++ b/22261/data/attachments/190e6da2da2071d8.txt @@ -0,0 +1,3 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "664b7190-5d5e-4118-9cd3-5c25c2c2e770", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "root", "message": "", "lineno": 42, "pathname": "/single-cell-data-portal/backend/curation/api/v1/curation/collections/actions.py", "request_id": "664b7190-5d5e-4118-9cd3-5c25c2c2e770", "is_published": false, "owner": "test_user_id"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "664b7190-5d5e-4118-9cd3-5c25c2c2e770", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 1640, "response_time": 0.003481626510620117}} diff --git a/22261/data/attachments/19442c2eee22cb57.txt b/22261/data/attachments/19442c2eee22cb57.txt new file mode 100644 index 000000000000..1f6a3c3ae1e9 --- /dev/null +++ b/22261/data/attachments/19442c2eee22cb57.txt @@ -0,0 +1 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:55:25.008Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_with_revision0/collections.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/span_collections/collections.json"} diff --git a/22261/data/attachments/1950e612a60b615a.txt b/22261/data/attachments/1950e612a60b615a.txt new file mode 100644 index 000000000000..cc80d9b0c4d4 --- /dev/null +++ b/22261/data/attachments/1950e612a60b615a.txt @@ -0,0 +1 @@ +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:32.008Z", "name": "backend.layers.processing.utils.spatial", "message": "Failed to create and upload deep zoom assets: Test exception", "lineno": 150, "pathname": "/single-cell-data-portal/backend/layers/processing/utils/spatial.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/utils/spatial.py\", line 145, in create_deep_zoom_assets\n image_array, _ = self._fetch_image(content)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\nException: Test exception"} diff --git a/22261/data/attachments/198193c4d6b7cc9c.txt b/22261/data/attachments/198193c4d6b7cc9c.txt new file mode 100644 index 000000000000..dad702afd54c --- /dev/null +++ b/22261/data/attachments/198193c4d6b7cc9c.txt @@ -0,0 +1,4 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9bae2604-250f-4cc4-94d6-c6098ae4b42d", "type": "REQUEST", "details": {"url": "/curation/v1/datasets", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:19.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9bae2604-250f-4cc4-94d6-c6098ae4b42d", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 16405, "response_time": 0.014729022979736328}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:19.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3945b241-083b-470f-8abd-be37b40e4aac", "type": "REQUEST", "details": {"url": "/curation/v1/datasets", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:19.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3945b241-083b-470f-8abd-be37b40e4aac", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 13689, "response_time": 0.0128326416015625}} diff --git a/22261/data/attachments/198b4c279cbd25b8.txt b/22261/data/attachments/198b4c279cbd25b8.txt new file mode 100644 index 000000000000..5328ab88ea4f --- /dev/null +++ b/22261/data/attachments/198b4c279cbd25b8.txt @@ -0,0 +1 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:55:25.008Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_with_published0/collections.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/span_collections/collections.json"} diff --git a/22261/data/attachments/19dd289be528ce18.txt b/22261/data/attachments/19dd289be528ce18.txt new file mode 100644 index 000000000000..bab56fc5fa9d --- /dev/null +++ b/22261/data/attachments/19dd289be528ce18.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:36.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0746945f-8737-4f5f-bebb-1171ed6358f9", "type": "REQUEST", "details": {"url": "/wmg/v2/query", "method": "POST", "content_length": 127}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:36.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "0746945f-8737-4f5f-bebb-1171ed6358f9", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 1205, "response_time": 0.04810810089111328}} diff --git a/22261/data/attachments/19df486175b0b797.txt b/22261/data/attachments/19df486175b0b797.txt new file mode 100644 index 000000000000..ce9067d15680 --- /dev/null +++ b/22261/data/attachments/19df486175b0b797.txt @@ -0,0 +1,3 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3b505079-da6f-44e0-a58b-48cfa0c293b0", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "root", "message": "", "lineno": 42, "pathname": "/single-cell-data-portal/backend/curation/api/v1/curation/collections/actions.py", "request_id": "3b505079-da6f-44e0-a58b-48cfa0c293b0", "is_published": true} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3b505079-da6f-44e0-a58b-48cfa0c293b0", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 1627, "response_time": 0.003962039947509766}} diff --git a/22261/data/attachments/19ecdda97912261.txt b/22261/data/attachments/19ecdda97912261.txt new file mode 100644 index 000000000000..836396a74370 --- /dev/null +++ b/22261/data/attachments/19ecdda97912261.txt @@ -0,0 +1,301 @@ +INFO root:app.py:22 {'dataset_version_id': '123', 'collection_version_id': '456', 'error': {}, 'execution_id': 'arn:aws:states:us-west-2:123456789012:execution:MyStateMachine'} +ERROR processing:logger.py:41 Failed to update dataset processing status +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 87, in update_dataset_processing_status_to_failed + get_business_logic().update_dataset_version_status( + File "/single-cell-data-portal/backend/portal/api/providers.py", line 18, in get_business_logic + DatabaseProvider(), + File "/single-cell-data-portal/backend/layers/persistence/persistence.py", line 57, in __init__ + database_uri = CorporaDbConfig().database_uri + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 54, in __getattr__ + self.load() + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 88, in load + self.load_from_aws() + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 99, in load_from_aws + secret = AwsSecret(secret_path) + File "/single-cell-data-portal/backend/common/utils/aws.py", line 31, in __init__ + self._load() + File "/single-cell-data-portal/backend/common/utils/aws.py", line 76, in _load + response = self.secrets_mgr.describe_secret(SecretId=self.name) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/" +ERROR processing:logger.py:41 Failed to clean up artifacts. +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 192, in cleanup_artifacts + delete_many_from_s3(artifact_bucket, object_key + "/") + File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 + bucket.objects.filter(Prefix=f"{prefix}").delete() + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action + return action(self, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ + for page in parent.pages(): + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages + for page in pages: + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ + response = self._make_request(current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request + return self._method(**current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url" +ERROR processing:logger.py:41 Failed to clean up datasets. +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 194, in cleanup_artifacts + datasets_bucket = os.environ["DATASETS_BUCKET"] + File "/usr/lib/python3.10/os.py", line 680, in __getitem__ + raise KeyError(key) from None +KeyError: 'DATASETS_BUCKET' +ERROR processing:logger.py:41 Failed to clean up cxgs. +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 198, in cleanup_artifacts + delete_many_from_s3(cellxgene_bucket, object_key + ".cxg/") + File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 + bucket.objects.filter(Prefix=f"{prefix}").delete() + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action + return action(self, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ + for page in parent.pages(): + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages + for page in pages: + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ + response = self._make_request(current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request + return self._method(**current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url" \ No newline at end of file diff --git a/22261/data/attachments/1a5c6f476d66a8c6.txt b/22261/data/attachments/1a5c6f476d66a8c6.txt new file mode 100644 index 000000000000..f64340f3d45b --- /dev/null +++ b/22261/data/attachments/1a5c6f476d66a8c6.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "b2356a3f-e288-4c64-b082-b3fa523982f3", "type": "REQUEST", "details": {"url": "/dp/v1/datasets/meta", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "b2356a3f-e288-4c64-b082-b3fa523982f3", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0009210109710693359}} diff --git a/22261/data/attachments/1a6048ffbca5bc96.txt b/22261/data/attachments/1a6048ffbca5bc96.txt new file mode 100644 index 000000000000..ce69db508d33 --- /dev/null +++ b/22261/data/attachments/1a6048ffbca5bc96.txt @@ -0,0 +1,12 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e186189e-da71-4e14-adbd-fd92ebe48dbf", "type": "REQUEST", "details": {"url": "/curation/v1/collections/826d279f-463f-4eb5-81ce-81c1cd99e8c3", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e186189e-da71-4e14-adbd-fd92ebe48dbf", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.002286195755004883}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "c06e0c95-9e00-4f6b-a27e-b95c74be1c1c", "type": "REQUEST", "details": {"url": "/curation/v1/collections/aaee047f-47e9-4ec8-9b27-9d379f25be9f", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "c06e0c95-9e00-4f6b-a27e-b95c74be1c1c", "type": "RESPONSE", "details": {"status_code": 401, "content_length": 119, "response_time": 0.0005822181701660156}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "65812fa0-9ae9-4ea6-9fa4-6aa14ac60c8b", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1f690411-8c24-4b1b-abda-544835b6387b", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "65812fa0-9ae9-4ea6-9fa4-6aa14ac60c8b", "type": "RESPONSE", "details": {"status_code": 204, "content_length": 0, "response_time": 0.0008955001831054688}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "dd9aec63-5b34-4fd6-873b-3aa188ec58c8", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1f690411-8c24-4b1b-abda-544835b6387b", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "dd9aec63-5b34-4fd6-873b-3aa188ec58c8", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0008234977722167969}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "498c210a-3cb2-4485-8846-a39601be761f", "type": "REQUEST", "details": {"url": "/curation/v1/collections/4123db94-ea9a-4f16-8ece-3bc52ec36cad", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "498c210a-3cb2-4485-8846-a39601be761f", "type": "RESPONSE", "details": {"status_code": 204, "content_length": 0, "response_time": 0.0008745193481445312}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e55b9742-2753-4070-8345-ef902e143fc0", "type": "REQUEST", "details": {"url": "/curation/v1/collections/4123db94-ea9a-4f16-8ece-3bc52ec36cad", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e55b9742-2753-4070-8345-ef902e143fc0", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0008149147033691406}} diff --git a/22261/data/attachments/1a8554b2bec29444.txt b/22261/data/attachments/1a8554b2bec29444.txt new file mode 100644 index 000000000000..efccfe034f01 --- /dev/null +++ b/22261/data/attachments/1a8554b2bec29444.txt @@ -0,0 +1,11 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 31f52817-3607-4260-89b9-905b609a0c28, 'url': 'http://fake.url', 'current_dataset_version_id': None} +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 31f52817-3607-4260-89b9-905b609a0c28, 'url': None, 'current_dataset_version_id': 290d97e1-57be-4e60-9be1-da1bb681f715} +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [71b16072-5fff-45b4-8a27-0473f88f8a8b/local.h5ad] to s3://artifact_bucket/71b16072-5fff-45b4-8a27-0473f88f8a8b/local.h5ad +INFO processing:process_logic.py:93 Updated database with h5ad. +INFO processing:process_logic.py:100 Uploaded 71b16072-5fff-45b4-8a27-0473f88f8a8b.h5ad to s3://datasets_bucket/71b16072-5fff-45b4-8a27-0473f88f8a8b/71b16072-5fff-45b4-8a27-0473f88f8a8b.h5ad +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22182/data/attachments/2a070185f9b9e12a.txt b/22261/data/attachments/1a9b027954e44558.txt similarity index 100% rename from 22182/data/attachments/2a070185f9b9e12a.txt rename to 22261/data/attachments/1a9b027954e44558.txt diff 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\"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'ARTIFACT_BUCKET'"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File 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"asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5fa443f9-22b7-4baf-a8fe-6b721ec32f6a", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1f09a7e3-72b0-47ae-8f1a-c2d6b3149595", "method": "PATCH", "content_length": 30}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5fa443f9-22b7-4baf-a8fe-6b721ec32f6a", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 558, "response_time": 0.0019969940185546875}} diff --git a/22261/data/attachments/ae1ba877922f5a21.txt b/22261/data/attachments/ae1ba877922f5a21.txt new file mode 100644 index 000000000000..8bfe498a2a12 --- /dev/null +++ b/22261/data/attachments/ae1ba877922f5a21.txt @@ -0,0 +1,4 @@ +INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/433f2971-c6f3-42b0-b61d-16021b4ffe64/awesome_zero_matrix_d4cd3d31-827a-4c47-a0ff-909048cb6fd8r +INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/433f2971-c6f3-42b0-b61d-16021b4ffe64/awesome_zero_matrix_d4cd3d31-827a-4c47-a0ff-909048cb6fd8c +INFO root:cxg_generation_utils.py:303 Store rows: 3 +INFO root:cxg_generation_utils.py:317 Store columns: 2 \ No newline at end of file diff --git a/22261/data/attachments/ae7ce740bfe4216b.txt b/22261/data/attachments/ae7ce740bfe4216b.txt new file mode 100644 index 000000000000..4a48a5332590 --- /dev/null +++ b/22261/data/attachments/ae7ce740bfe4216b.txt @@ -0,0 +1,5 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:56:01.008Z", "name": "root", "message": "", "lineno": 22, "pathname": "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", "dataset_version_id": "123", "collection_version_id": "456", "error": {}, "execution_id": "arn:aws:states:us-west-2:123456789012:execution:MyStateMachine"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:13.008Z", "name": "processing", "message": "Failed to update dataset processing status", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 87, in update_dataset_processing_status_to_failed\n get_business_logic().update_dataset_version_status(\n File \"/single-cell-data-portal/backend/portal/api/providers.py\", line 18, in get_business_logic\n DatabaseProvider(),\n File \"/single-cell-data-portal/backend/layers/persistence/persistence.py\", line 57, in __init__\n database_uri = CorporaDbConfig().database_uri\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 54, in __getattr__\n self.load()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 88, in load\n self.load_from_aws()\n File \"/single-cell-data-portal/backend/common/utils/secret_config.py\", line 99, in load_from_aws\n secret = AwsSecret(secret_path)\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 31, in __init__\n self._load()\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 76, in _load\n response = self.secrets_mgr.describe_secret(SecretId=self.name)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/\""} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:17.008Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url\""} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:17.008Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 194, in cleanup_artifacts\n datasets_bucket = os.environ[\"DATASETS_BUCKET\"]\n File \"/usr/lib/python3.10/os.py\", line 680, in __getitem__\n raise KeyError(key) from None\nKeyError: 'DATASETS_BUCKET'"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 199, in _new_conn\n sock = connection.create_connection(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py\", line 60, in create_connection\n for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM):\n File \"/usr/lib/python3.10/socket.py\", line 967, in getaddrinfo\n for res in _socket.getaddrinfo(host, port, family, type, proto, flags):\nsocket.gaierror: [Errno -3] Temporary failure in name resolution\n\nThe above exception was the direct cause of the following exception:\n\nTraceback (most recent call last):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 464, in send\n urllib_response = conn.urlopen(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 843, in urlopen\n retries = retries.increment(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py\", line 449, in increment\n raise reraise(type(error), error, _stacktrace)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py\", line 39, in reraise\n raise value\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 789, in urlopen\n response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py\", line 495, in _make_request\n conn.request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 96, in request\n rval = super().request(method, url, body, headers, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 441, in request\n self.endheaders()\n File \"/usr/lib/python3.10/http/client.py\", line 1278, in endheaders\n self._send_output(message_body, encode_chunked=encode_chunked)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 123, in _send_output\n self.send(msg)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py\", line 223, in send\n return super().send(str)\n File \"/usr/lib/python3.10/http/client.py\", line 976, in send\n self.connect()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 279, in connect\n self.sock = self._new_conn()\n File \"/opt/venv/lib/python3.10/site-packages/urllib3/connection.py\", line 206, in _new_conn\n raise NameResolutionError(self.host, self, e) from e\nurllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution)\n\nDuring handling of the above exception, another exception occurred:\n\nTraceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 198, in cleanup_artifacts\n delete_many_from_s3(cellxgene_bucket, object_key + \".cxg/\")\n File \"/single-cell-data-portal/backend/common/utils/aws.py\", line 107, in delete_many_from_s3\n bucket.objects.filter(Prefix=f\"{prefix}\").delete()\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 555, in batch_action\n return action(self, *args, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py\", line 134, in __call__\n for page in parent.pages():\n File \"/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py\", line 169, in pages\n for page in pages:\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 269, in __iter__\n response = self._make_request(current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/paginate.py\", line 357, in _make_request\n return self._method(**current_kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 569, in _api_call\n return self._make_api_call(operation_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1005, in _make_api_call\n http, parsed_response = self._make_request(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/client.py\", line 1029, in _make_request\n return self._endpoint.make_request(operation_model, request_dict)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 119, in make_request\n return self._send_request(request_dict, operation_model)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 200, in _send_request\n while self._needs_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 360, in _needs_retry\n responses = self._event_emitter.emit(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 412, in emit\n return self._emitter.emit(aliased_event_name, **kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 256, in emit\n return self._emit(event_name, kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/hooks.py\", line 239, in _emit\n response = handler(**kwargs)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 207, in __call__\n if self._checker(**checker_kwargs):\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 284, in __call__\n should_retry = self._should_retry(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 320, in _should_retry\n return self._checker(attempt_number, response, caught_exception)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 363, in __call__\n checker_response = checker(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 247, in __call__\n return self._check_caught_exception(\n File \"/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py\", line 416, in _check_caught_exception\n raise caught_exception\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 279, in _do_get_response\n http_response = self._send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py\", line 383, in _send\n return self.http_session.send(request)\n File \"/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py\", line 493, in send\n raise EndpointConnectionError(endpoint_url=request.url, error=e)\nbotocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: \"http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url\""} diff --git a/22182/data/attachments/f237b63ad55e1599.txt b/22261/data/attachments/af113910df676155.txt similarity index 100% rename from 22182/data/attachments/f237b63ad55e1599.txt rename to 22261/data/attachments/af113910df676155.txt diff --git a/22261/data/attachments/af2fb9d363de6717.txt b/22261/data/attachments/af2fb9d363de6717.txt new file mode 100644 index 000000000000..b9767da324d0 --- /dev/null +++ b/22261/data/attachments/af2fb9d363de6717.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bb88bcbf-9e3d-450a-af05-d901c9f24217", "type": "REQUEST", "details": {"url": "/dp/v1/collections/e133ae3c-1de7-4e54-8807-c3b5398e09ca/upload-links", "method": "POST", "content_length": 67}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bb88bcbf-9e3d-450a-af05-d901c9f24217", "type": "RESPONSE", "details": {"status_code": 202, "content_length": 59, "response_time": 0.0017895698547363281}} diff --git a/22261/data/attachments/af6b35abacc449ad.txt b/22261/data/attachments/af6b35abacc449ad.txt new file mode 100644 index 000000000000..52f7ea202d02 --- /dev/null +++ b/22261/data/attachments/af6b35abacc449ad.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:34.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "267935c3-0c43-4b06-9184-56c3e7b200be", "type": "REQUEST", "details": {"url": "/wmg/v2/query", "method": "POST", "content_length": 127}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:34.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "267935c3-0c43-4b06-9184-56c3e7b200be", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3064, "response_time": 0.04900932312011719}} diff --git a/22261/data/attachments/aff7fea1fd042ca0.txt b/22261/data/attachments/aff7fea1fd042ca0.txt new file mode 100644 index 000000000000..02c41ea87a12 --- /dev/null +++ b/22261/data/attachments/aff7fea1fd042ca0.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d1ebd4d7-7b35-40d8-ae20-dfde79b5a6b3", "type": "REQUEST", "details": {"url": "/dp/v1/user-datasets/index", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "d1ebd4d7-7b35-40d8-ae20-dfde79b5a6b3", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 7879, "response_time": 0.006150960922241211}} diff --git a/22261/data/attachments/b0834b1d3d816237.txt b/22261/data/attachments/b0834b1d3d816237.txt new file mode 100644 index 000000000000..1403491519bb --- /dev/null +++ b/22261/data/attachments/b0834b1d3d816237.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e254ea73-6bec-4898-8d6a-80b3471febb2", "type": "REQUEST", "details": {"url": "/dp/v1/auth/key", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "e254ea73-6bec-4898-8d6a-80b3471febb2", "type": "RESPONSE", "details": {"status_code": 404, "content_length": 104, "response_time": 0.0007989406585693359}} diff --git a/22261/data/attachments/b095f12fb192fe1a.txt b/22261/data/attachments/b095f12fb192fe1a.txt new file mode 100644 index 000000000000..ec50ede350a1 --- /dev/null +++ b/22261/data/attachments/b095f12fb192fe1a.txt @@ -0,0 +1,14 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 01b9ea3e-17f1-4558-bc47-4471cff92957, 'url': 'nothing', 'current_dataset_version_id': None} +INFO processing:process_seurat.py:80 enforce canonical format in X +INFO processing:process_seurat.py:83 enforce canonical format in raw.X +INFO processing:process_logic.py:113 Converting local.h5ad +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:119 Finished converting in 0:00:00.000502 +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [7b2c4f24-7f15-48f8-94a7-8326c15e3bdd/local.rds] to s3://fake_bucket_name/7b2c4f24-7f15-48f8-94a7-8326c15e3bdd/local.rds +INFO processing:process_logic.py:93 Updated database with rds. +INFO processing:process_logic.py:100 Uploaded 7b2c4f24-7f15-48f8-94a7-8326c15e3bdd.rds to s3://fake_datasets_bucket/7b2c4f24-7f15-48f8-94a7-8326c15e3bdd/7b2c4f24-7f15-48f8-94a7-8326c15e3bdd.rds +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact \ No newline at end of file diff --git a/22261/data/attachments/b0b4a562d1fe4a3f.txt b/22261/data/attachments/b0b4a562d1fe4a3f.txt new file mode 100644 index 000000000000..ac68ee44c8db --- /dev/null +++ b/22261/data/attachments/b0b4a562d1fe4a3f.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "6906aaa9-3b8f-4834-824e-c5e48e132fbe", "type": "REQUEST", "details": {"url": "/dp/v1/collections/10682679-b5af-4de4-9b34-941af3f5b3fb/upload-links", "method": "PUT", "content_length": 113}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "6906aaa9-3b8f-4834-824e-c5e48e132fbe", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0022046566009521484}} diff --git a/22261/data/attachments/b161260e52153a28.txt b/22261/data/attachments/b161260e52153a28.txt new file mode 100644 index 000000000000..878f703cd4e5 --- /dev/null +++ b/22261/data/attachments/b161260e52153a28.txt @@ -0,0 +1,6 @@ +RemoteConfigWorker created with polling interval 5 +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:19.008Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "RemoteConfigWorker created with polling interval 5", "lineno": 37, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/worker.py", "request_id": ""} +[1][P: 0] Register ASM Remote Config Callback +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:19.008Z", "name": "ddtrace.appsec._remoteconfiguration", "message": "[1][P: 0] Register ASM Remote Config Callback", "lineno": 65, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/appsec/_remoteconfiguration.py", "request_id": ""} +[PID 1] Subscriber ASM initialized +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:19.008Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1] Subscriber ASM initialized", "lineno": 30, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": ""} diff --git a/22182/data/attachments/5336566a9d3133bf.txt b/22261/data/attachments/b17baf2021f1cb21.txt similarity index 100% rename from 22182/data/attachments/5336566a9d3133bf.txt rename to 22261/data/attachments/b17baf2021f1cb21.txt diff --git a/22261/data/attachments/b188ccff4aa3d6ef.txt b/22261/data/attachments/b188ccff4aa3d6ef.txt new file mode 100644 index 000000000000..41c7aa3f5cc7 --- /dev/null +++ b/22261/data/attachments/b188ccff4aa3d6ef.txt @@ -0,0 +1,48 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5f637417-3deb-4668-8663-09a794ef52d2", "type": "REQUEST", "details": {"url": "/curation/v1/collections/602cf260-a7fa-4c40-9821-692f15e505e6", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5f637417-3deb-4668-8663-09a794ef52d2", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3608, "response_time": 0.003937959671020508}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bcabf38b-f86f-42a9-a6d1-6c4c3e143826", "type": "REQUEST", "details": {"url": "/curation/v1/collections/602cf260-a7fa-4c40-9821-692f15e505e6", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "bcabf38b-f86f-42a9-a6d1-6c4c3e143826", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3608, "response_time": 0.003957509994506836}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "62179301-90fa-4953-97af-71702bda22ab", "type": "REQUEST", "details": {"url": "/curation/v1/collections/602cf260-a7fa-4c40-9821-692f15e505e6", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "62179301-90fa-4953-97af-71702bda22ab", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3608, "response_time": 0.0038216114044189453}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "74b9bcf8-99ba-42c4-bd3c-088b77b06278", "type": "REQUEST", "details": {"url": "/curation/v1/collections/602cf260-a7fa-4c40-9821-692f15e505e6", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "74b9bcf8-99ba-42c4-bd3c-088b77b06278", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3608, "response_time": 0.0037949085235595703}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3107919f-751e-4418-8914-255dd3476df3", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1ac969f7-eb45-44a1-b067-26df5f6972b2", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3107919f-751e-4418-8914-255dd3476df3", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3578, "response_time": 0.0048198699951171875}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9c275527-fe14-4733-a472-ddb767b1998e", "type": "REQUEST", "details": {"url": "/curation/v1/collections/1ac969f7-eb45-44a1-b067-26df5f6972b2", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "9c275527-fe14-4733-a472-ddb767b1998e", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 3578, "response_time": 0.004866123199462891}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": 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"content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fcebc090-c80c-4ff5-9507-677c39af6bfa", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 427, "response_time": 0.0014138221740722656}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "110c4f77-980e-4357-bec3-a2bab11c7e11", "type": "REQUEST", "details": {"url": "/dp/v1/collections/27bf33ad-1938-4dea-844a-b40b5c839302", "method": "DELETE", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "110c4f77-980e-4357-bec3-a2bab11c7e11", "type": "RESPONSE", "details": {"status_code": 204, "content_length": null, "response_time": 0.0009071826934814453}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "f41500f1-9d41-4d5d-a42f-b66e18955b33", "type": "REQUEST", "details": {"url": "/dp/v1/collections/27bf33ad-1938-4dea-844a-b40b5c839302", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "f41500f1-9d41-4d5d-a42f-b66e18955b33", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0008347034454345703}} diff --git a/22261/data/attachments/d14c17d5932c9e99.txt b/22261/data/attachments/d14c17d5932c9e99.txt new file mode 100644 index 000000000000..5d7170597fa1 --- /dev/null +++ b/22261/data/attachments/d14c17d5932c9e99.txt @@ -0,0 +1,16 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': acf3538c-2c0e-4092-b77c-13111cc8b930, 'url': 'http://fake.url', 'current_dataset_version_id': None} +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': acf3538c-2c0e-4092-b77c-13111cc8b930, 'url': None, 'current_dataset_version_id': 738e8571-d439-48d8-a369-4d6ab0a1f84b} +INFO processing:dataset_metadata_update.py:333 Main: No raw h5ad update required +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [b2851268-5054-4d2b-adbb-4d31ba4332c7/raw.h5ad] to s3://artifact_bucket/b2851268-5054-4d2b-adbb-4d31ba4332c7/raw.h5ad +INFO processing:process_logic.py:93 Updated database with raw_h5ad. +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:dataset_metadata_update.py:337 Main: Starting thread for h5ad update +INFO processing:process_logic.py:45 Updating processing status +INFO processing:dataset_metadata_update.py:380 Main: Starting thread for cxg update +INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22261/data/attachments/d15856f2f164b13d.txt b/22261/data/attachments/d15856f2f164b13d.txt new file mode 100644 index 000000000000..cb3f5e5a38b7 --- /dev/null +++ b/22261/data/attachments/d15856f2f164b13d.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:55:25.008Z", "name": "processing", "message": "All datasets in the collection have been migrated", "lineno": 159, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "dataset_count": 2} +{"levelname": "INFO", "asctime": "2024-10-08T12:55:25.008Z", "name": "processing", "message": "Uploaded to S3", "lineno": 313, "pathname": "/single-cell-data-portal/backend/layers/processing/schema_migration.py", "file_name": "/tmp/pytest-of-root/pytest-0/test_filter_schema_version0/c02e77ee-54c6-49ff-b91f-4b36394723cc.json", "bucket": "artifact-bucket", "key": "schema_migration/test-execution-arn/log_errors_and_cleanup/c02e77ee-54c6-49ff-b91f-4b36394723cc.json"} diff --git a/22261/data/attachments/d1fae5a300b45bbc.txt b/22261/data/attachments/d1fae5a300b45bbc.txt new file mode 100644 index 000000000000..c342e916fbe4 --- /dev/null +++ b/22261/data/attachments/d1fae5a300b45bbc.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "18104fc3-e2b7-49c1-aac4-dc59ef990f17", "type": "REQUEST", "details": {"url": "/dp/v1/collections", "method": "POST", "content_length": 298}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "18104fc3-e2b7-49c1-aac4-dc59ef990f17", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 62, "response_time": 0.001565694808959961}} diff --git a/22261/data/attachments/d1fd8769a3960e99.txt b/22261/data/attachments/d1fd8769a3960e99.txt new file mode 100644 index 000000000000..cddf0c7be1e3 --- /dev/null +++ b/22261/data/attachments/d1fd8769a3960e99.txt @@ -0,0 +1,4 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1c906315-6ec4-4fb0-b6d9-6287e979218a", "type": "REQUEST", "details": {"url": "/dp/v1/collections", "method": "POST", "content_length": 172}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1c906315-6ec4-4fb0-b6d9-6287e979218a", "type": "RESPONSE", "details": {"status_code": 400, "content_length": 220, "response_time": 0.0010256767272949219}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "f54a6bb5-b85c-4038-b75a-741ed04a608a", "type": "REQUEST", "details": {"url": "/dp/v1/collections", "method": "POST", "content_length": 231}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "f54a6bb5-b85c-4038-b75a-741ed04a608a", "type": "RESPONSE", "details": {"status_code": 400, "content_length": 238, "response_time": 0.0010073184967041016}} diff --git a/22261/data/attachments/d20a25843a2b3505.txt b/22261/data/attachments/d20a25843a2b3505.txt new file mode 100644 index 000000000000..59b3b87fbad5 --- /dev/null +++ b/22261/data/attachments/d20a25843a2b3505.txt @@ -0,0 +1,3 @@ +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up artifacts.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\nException: Boom!"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up datasets.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 195, in cleanup_artifacts\n delete_many_from_s3(datasets_bucket, object_key + \".\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\nException: Boom!"} +{"levelname": "ERROR", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Failed to clean up cxgs.", "lineno": 41, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "exc_info": "Traceback (most recent call last):\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 198, in cleanup_artifacts\n delete_many_from_s3(cellxgene_bucket, object_key + \".cxg/\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 195, in cleanup_artifacts\n delete_many_from_s3(datasets_bucket, object_key + \".\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\n File \"/single-cell-data-portal/backend/layers/processing/upload_failures/app.py\", line 192, in cleanup_artifacts\n delete_many_from_s3(artifact_bucket, object_key + \"/\")\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1114, in __call__\n return self._mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1118, in _mock_call\n return self._execute_mock_call(*args, **kwargs)\n File \"/usr/lib/python3.10/unittest/mock.py\", line 1173, in _execute_mock_call\n raise effect\nException: Boom!"} diff --git a/22261/data/attachments/d36aae339b0192d7.txt b/22261/data/attachments/d36aae339b0192d7.txt new file mode 100644 index 000000000000..99737cbd1ab3 --- /dev/null +++ b/22261/data/attachments/d36aae339b0192d7.txt @@ -0,0 +1,15 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 421f759a-e5e0-4286-9320-da3a1e31b3fc, 'url': 'nothing', 'current_dataset_version_id': None} +INFO processing:process_logic.py:113 Converting local.h5ad +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:119 Finished converting in 0:00:00.000509 +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_cxg.py:109 Updating database with cxg artifact for dataset f3ca9433-a343-4a8e-8f3d-ae7c6be578b0. s3_uri is s3://fake_cxg_bucket/f3ca9433-a343-4a8e-8f3d-ae7c6be578b0.cxg/ +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:113 Converting local.h5ad +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:119 Finished converting in 0:00:00.000250 +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_cxg.py:109 Updating database with cxg artifact for dataset f3ca9433-a343-4a8e-8f3d-ae7c6be578b0. s3_uri is s3://fake_cxg_bucket/f3ca9433-a343-4a8e-8f3d-ae7c6be578b0.cxg/ +INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22261/data/attachments/d36d7d7f97a2faae.txt b/22261/data/attachments/d36d7d7f97a2faae.txt new file mode 100644 index 000000000000..b2eb0b1ba11b --- /dev/null +++ b/22261/data/attachments/d36d7d7f97a2faae.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1d1648ea-4c88-4646-9db1-392dbbb23ec4", "type": "REQUEST", "details": {"url": "/dp/v1/collections/24b1c410-971b-4b9b-9e8f-1e2e65b1c575/upload-links", "method": "POST", "content_length": 67}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "1d1648ea-4c88-4646-9db1-392dbbb23ec4", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.001003265380859375}} diff --git a/22182/data/attachments/537a15470c6061aa.txt b/22261/data/attachments/d3980e4b8ca35b0f.txt similarity index 100% rename from 22182/data/attachments/537a15470c6061aa.txt rename to 22261/data/attachments/d3980e4b8ca35b0f.txt diff --git a/22182/data/attachments/a26a66fa4409b2ed.txt b/22261/data/attachments/d3eb8d8eb58ddd90.txt similarity index 100% rename from 22182/data/attachments/a26a66fa4409b2ed.txt rename to 22261/data/attachments/d3eb8d8eb58ddd90.txt diff --git a/22261/data/attachments/d4fe8389f1176da6.txt b/22261/data/attachments/d4fe8389f1176da6.txt new file mode 100644 index 000000000000..e7f4c7659fa7 --- /dev/null +++ b/22261/data/attachments/d4fe8389f1176da6.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fcebcf47-ad80-4080-a4ff-c4933147ef80", "type": "REQUEST", "details": {"url": "/curation/v1/collections/07c70706-b661-49d2-8f5e-163f056fdeee", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:18.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fcebcf47-ad80-4080-a4ff-c4933147ef80", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 5119, "response_time": 0.005851030349731445}} diff --git a/22261/data/attachments/d5262503ea1db38a.txt b/22261/data/attachments/d5262503ea1db38a.txt new file mode 100644 index 000000000000..964f89c6d1b8 --- /dev/null +++ b/22261/data/attachments/d5262503ea1db38a.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "73928e9b-e0df-4e86-9a36-ff65783643d6", "type": "REQUEST", "details": {"url": "/dp/v1/collections/d69154ee-133e-4614-89bd-9941f5e69dd5", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "73928e9b-e0df-4e86-9a36-ff65783643d6", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 8351, "response_time": 0.006576061248779297}} diff --git a/22261/data/attachments/d536ef9692aff107.txt b/22261/data/attachments/d536ef9692aff107.txt new file mode 100644 index 000000000000..f48111aed8f4 --- /dev/null +++ b/22261/data/attachments/d536ef9692aff107.txt @@ -0,0 +1,18 @@ +INFO root:h5ad_data_file.py:185 Reading in AnnData dataset: 5b64576b-7c4b-4283-a01b-47dab010410b.h5ad +INFO root:h5ad_data_file.py:187 Completed reading in AnnData dataset! +INFO root:h5ad_data_file.py:68 Beginning writing to CXG. +INFO root:h5ad_data_file.py:72 ...group created, with name /single-cell-data-portal/tests/unit/backend/fixtures/5b64576b-7c4b-4283-a01b-47dab010410b.cxg +INFO root:h5ad_data_file.py:77 ...dataset metadata saved +INFO root:h5ad_data_file.py:80 ...dataset obs dataframe saved +INFO root:h5ad_data_file.py:83 ...dataset var dataframe saved +INFO root:h5ad_data_file.py:86 ...dataset uns dataframe saved +INFO root:h5ad_data_file.py:142 .../single-cell-data-portal/tests/unit/backend/fixtures/5b64576b-7c4b-4283-a01b-47dab010410b.cxg/emb/awesome_embedding embedding created +INFO root:h5ad_data_file.py:89 ...dataset embeddings saved +INFO root:h5ad_data_file.py:101 is_sparse: True +INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/5b64576b-7c4b-4283-a01b-47dab010410b.cxg/Xr +INFO root:cxg_generation_utils.py:217 create /single-cell-data-portal/tests/unit/backend/fixtures/5b64576b-7c4b-4283-a01b-47dab010410b.cxg/Xc +INFO root:cxg_generation_utils.py:303 Store rows: 3 +INFO root:cxg_generation_utils.py:317 Store columns: 4 +INFO root:h5ad_data_file.py:106 start consolidating +INFO root:h5ad_data_file.py:92 ...dataset X matrix saved +INFO root:h5ad_data_file.py:94 Completed writing to CXG. \ No newline at end of file diff --git a/22261/data/attachments/d53cc87124b7c2d6.txt b/22261/data/attachments/d53cc87124b7c2d6.txt new file mode 100644 index 000000000000..39650b1006df --- /dev/null +++ b/22261/data/attachments/d53cc87124b7c2d6.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "95d15113-1204-4cb2-b5b9-c46c1b3b1556", "type": "REQUEST", "details": {"url": "/curation/ui/", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "95d15113-1204-4cb2-b5b9-c46c1b3b1556", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 1490, "response_time": 0.004709482192993164}} diff --git a/22261/data/attachments/d55ea11060b38420.txt b/22261/data/attachments/d55ea11060b38420.txt new file mode 100644 index 000000000000..14b21f46a534 --- /dev/null +++ b/22261/data/attachments/d55ea11060b38420.txt @@ -0,0 +1,3 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fc81deeb-06c7-4fee-b160-a98e235dda67", "type": "REQUEST", "details": {"url": "/dp/v1/datasets/9578a34e-eac7-4dbb-87a5-afa6c62fe6c6/asset/20fb01af-6173-455b-a602-6d44e00ac1f4", "method": "GET", "content_length": null}} +{"levelname": "ERROR", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "InternalServerError", "lineno": 103, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fc81deeb-06c7-4fee-b160-a98e235dda67", "exc_info": "Traceback (most recent call last):\n File \"/usr/local/lib/python3.10/dist-packages/flask/app.py\", line 1823, in full_dispatch_request\n rv = self.dispatch_request()\n File \"/usr/local/lib/python3.10/dist-packages/flask/app.py\", line 1799, in dispatch_request\n return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/decorator.py\", line 68, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/uri_parsing.py\", line 149, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/validation.py\", line 399, in wrapper\n return function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/response.py\", line 112, in wrapper\n response = function(request)\n File \"/usr/local/lib/python3.10/dist-packages/connexion/decorators/parameter.py\", line 120, in wrapper\n return function(**kwargs)\n File \"/single-cell-data-portal/backend/portal/api/portal_api.py\", line 743, in get_dataset_asset\n raise ServerErrorHTTPException() from None\nbackend.common.utils.http_exceptions.ServerErrorHTTPException"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "fc81deeb-06c7-4fee-b160-a98e235dda67", 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"5e63f0b9-d2a5-4968-a687-49bb3a6fd0f6", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.001920938491821289}} diff --git a/22182/data/attachments/cc5a242fe9c064be.txt b/22261/data/attachments/d66397974aca9dac.txt similarity index 100% rename from 22182/data/attachments/cc5a242fe9c064be.txt rename to 22261/data/attachments/d66397974aca9dac.txt diff --git a/22261/data/attachments/d764efc0a206a4ac.txt b/22261/data/attachments/d764efc0a206a4ac.txt new file mode 100644 index 000000000000..917f77cbfda7 --- /dev/null +++ b/22261/data/attachments/d764efc0a206a4ac.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:34.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "69a29890-4fad-4bd8-95bb-93b9c2ed17c5", "type": "REQUEST", "details": {"url": "/wmg/v2/query", "method": "POST", "content_length": 2}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:34.008Z", "name": "corpora-api-wmg-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "69a29890-4fad-4bd8-95bb-93b9c2ed17c5", "type": "RESPONSE", "details": {"status_code": 400, "content_length": 118, "response_time": 0.0006866455078125}} diff --git a/22261/data/attachments/d82c8656b589b4ff.txt b/22261/data/attachments/d82c8656b589b4ff.txt new file mode 100644 index 000000000000..096fb3a340a9 --- /dev/null +++ b/22261/data/attachments/d82c8656b589b4ff.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "dbfd3a3f-d509-4f2b-b9ca-d3a96237db6c", "type": "REQUEST", "details": {"url": "/curation/v1/collections", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:17.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "dbfd3a3f-d509-4f2b-b9ca-d3a96237db6c", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0008974075317382812}} diff --git a/22261/data/attachments/d9474fbfa0b36321.txt b/22261/data/attachments/d9474fbfa0b36321.txt new file mode 100644 index 000000000000..c8fce660f6a8 --- /dev/null +++ b/22261/data/attachments/d9474fbfa0b36321.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "7edd620a-6b6d-48e9-a263-244c3f6c769e", "type": "REQUEST", "details": {"url": "/dp/v1/collections/5f7a82da-5fe5-40f8-bee5-84f8ab079ef9/upload-links", "method": "PUT", "content_length": 113}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": 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"corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "67fbc6db-4bd5-4b8c-a6ae-d843940e37ae", "type": "RESPONSE", "details": {"status_code": 201, "content_length": 59, "response_time": 0.0014693737030029297}} diff --git a/22261/data/attachments/d9e934ea187c9f49.txt b/22261/data/attachments/d9e934ea187c9f49.txt new file mode 100644 index 000000000000..6de84266eca1 --- /dev/null +++ b/22261/data/attachments/d9e934ea187c9f49.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Start download_from_source_uri", "lineno": 26, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "type": "METRIC"} +{"levelname": "INFO", "asctime": "2024-10-08T12:56:29.008Z", "name": "processing", "message": "Complete download_from_source_uri", "lineno": 28, "pathname": "/single-cell-data-portal/backend/layers/processing/logger.py", "type": 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"type": "REQUEST", "details": {"url": "/dp/v1/collections/4a13ef3a-6bc9-47b6-bf99-359aa47183b6", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "99d4ef5b-3753-4ada-90d9-b729232ae10a", "type": "RESPONSE", "details": {"status_code": 403, "content_length": 132, "response_time": 0.0008482933044433594}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "28686a35-c606-4da7-b28b-ed95d29b4740", "type": "REQUEST", "details": {"url": "/dp/v1/collections/91a0fb05-5364-4aa4-89ad-dd35ba2ec9d4", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:21.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "28686a35-c606-4da7-b28b-ed95d29b4740", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 7747, "response_time": 0.008123636245727539}} diff --git a/22261/data/attachments/dad6feb62876fe9f.txt b/22261/data/attachments/dad6feb62876fe9f.txt new file mode 100644 index 000000000000..e22cc4657b7e --- /dev/null +++ b/22261/data/attachments/dad6feb62876fe9f.txt @@ -0,0 +1,17 @@ +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 05ad493a-9c72-4127-94d0-0096d10f5310, 'url': 'http://fake.url', 'current_dataset_version_id': None} +INFO backend.layers.business.business:business.py:553 {'message': 'ingesting dataset', 'collection_version_id': 05ad493a-9c72-4127-94d0-0096d10f5310, 'url': None, 'current_dataset_version_id': e958494b-42fb-4d74-9c11-5d29c08dab7a} +INFO processing:dataset_metadata_update.py:333 Main: No raw h5ad update required +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:26 Start create_artifact +INFO processing:process_logic.py:45 Updating processing status +INFO processing:process_logic.py:91 Uploaded [56d7e9e0-cc8e-4ef7-b2a8-ccec910c13de/raw.h5ad] to s3://artifact_bucket/56d7e9e0-cc8e-4ef7-b2a8-ccec910c13de/raw.h5ad +INFO processing:process_logic.py:93 Updated database with raw_h5ad. +INFO processing:process_logic.py:45 Updating processing status +INFO processing:logger.py:28 Complete create_artifact +INFO processing:process_logic.py:45 Updating processing status +ERROR processing:dataset_metadata_update.py:353 Cannot find labeled H5AD artifact uri for e958494b-42fb-4d74-9c11-5d29c08dab7a. +INFO processing:process_logic.py:45 Updating processing status +INFO processing:dataset_metadata_update.py:357 Main: Starting thread for rds update +INFO processing:dataset_metadata_update.py:380 Main: Starting thread for cxg update +INFO processing:process_logic.py:45 Updating processing status \ No newline at end of file diff --git a/22261/data/attachments/db31ae204af95d7a.txt b/22261/data/attachments/db31ae204af95d7a.txt new file mode 100644 index 000000000000..74e8df6a92ef --- /dev/null +++ b/22261/data/attachments/db31ae204af95d7a.txt @@ -0,0 +1,302 @@ +INFO root:app.py:22 {'dataset_version_id': '123', 'collection_version_id': '456', 'error': {}, 'execution_id': 'arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine'} +INFO root:app.py:33 Skipping slack notification for arn:aws:states:us-west-2:migrate_123456789012:execution:MyStateMachine because failure is related to a schema migration +ERROR processing:logger.py:41 Failed to update dataset processing status +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 87, in update_dataset_processing_status_to_failed + get_business_logic().update_dataset_version_status( + File "/single-cell-data-portal/backend/portal/api/providers.py", line 18, in get_business_logic + DatabaseProvider(), + File "/single-cell-data-portal/backend/layers/persistence/persistence.py", line 57, in __init__ + database_uri = CorporaDbConfig().database_uri + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 54, in __getattr__ + self.load() + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 88, in load + self.load_from_aws() + File "/single-cell-data-portal/backend/common/utils/secret_config.py", line 99, in load_from_aws + secret = AwsSecret(secret_path) + File "/single-cell-data-portal/backend/common/utils/aws.py", line 31, in __init__ + self._load() + File "/single-cell-data-portal/backend/common/utils/aws.py", line 76, in _load + response = self.secrets_mgr.describe_secret(SecretId=self.name) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/" +ERROR processing:logger.py:41 Failed to clean up artifacts. +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 192, in cleanup_artifacts + delete_many_from_s3(artifact_bucket, object_key + "/") + File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 + bucket.objects.filter(Prefix=f"{prefix}").delete() + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action + return action(self, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ + for page in parent.pages(): + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages + for page in pages: + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ + response = self._make_request(current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request + return self._method(**current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/artifact-bucket?prefix=123%2F&encoding-type=url" +ERROR processing:logger.py:41 Failed to clean up datasets. +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 194, in cleanup_artifacts + datasets_bucket = os.environ["DATASETS_BUCKET"] + File "/usr/lib/python3.10/os.py", line 680, in __getitem__ + raise KeyError(key) from None +KeyError: 'DATASETS_BUCKET' +ERROR processing:logger.py:41 Failed to clean up cxgs. +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 199, in _new_conn + sock = connection.create_connection( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/connection.py", line 60, in create_connection + for res in socket.getaddrinfo(host, port, family, socket.SOCK_STREAM): + File "/usr/lib/python3.10/socket.py", line 967, in getaddrinfo + for res in _socket.getaddrinfo(host, port, family, type, proto, flags): +socket.gaierror: [Errno -3] Temporary failure in name resolution + +The above exception was the direct cause of the following exception: + +Traceback (most recent call last): + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 464, in send + urllib_response = conn.urlopen( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 843, in urlopen + retries = retries.increment( + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/retry.py", line 449, in increment + raise reraise(type(error), error, _stacktrace) + File "/opt/venv/lib/python3.10/site-packages/urllib3/util/util.py", line 39, in reraise + raise value + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 789, in urlopen + response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/urllib3/connectionpool.py", line 495, in _make_request + conn.request( + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 96, in request + rval = super().request(method, url, body, headers, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 441, in request + self.endheaders() + File "/usr/lib/python3.10/http/client.py", line 1278, in endheaders + self._send_output(message_body, encode_chunked=encode_chunked) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 123, in _send_output + self.send(msg) + File "/opt/venv/lib/python3.10/site-packages/botocore/awsrequest.py", line 223, in send + return super().send(str) + File "/usr/lib/python3.10/http/client.py", line 976, in send + self.connect() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 279, in connect + self.sock = self._new_conn() + File "/opt/venv/lib/python3.10/site-packages/urllib3/connection.py", line 206, in _new_conn + raise NameResolutionError(self.host, self, e) from e +urllib3.exceptions.NameResolutionError: : Failed to resolve 'localstack' ([Errno -3] Temporary failure in name resolution) + +During handling of the above exception, another exception occurred: + +Traceback (most recent call last): + File "/single-cell-data-portal/backend/layers/processing/upload_failures/app.py", line 198, in cleanup_artifacts + delete_many_from_s3(cellxgene_bucket, object_key + ".cxg/") + File "/single-cell-data-portal/backend/common/utils/aws.py", line 107, in delete_many_from_s3 + bucket.objects.filter(Prefix=f"{prefix}").delete() + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 555, in batch_action + return action(self, *args, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/action.py", line 134, in __call__ + for page in parent.pages(): + File "/opt/venv/lib/python3.10/site-packages/boto3/resources/collection.py", line 169, in pages + for page in pages: + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 269, in __iter__ + response = self._make_request(current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/paginate.py", line 357, in _make_request + return self._method(**current_kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 569, in _api_call + return self._make_api_call(operation_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1005, in _make_api_call + http, parsed_response = self._make_request( + File "/opt/venv/lib/python3.10/site-packages/botocore/client.py", line 1029, in _make_request + return self._endpoint.make_request(operation_model, request_dict) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 119, in make_request + return self._send_request(request_dict, operation_model) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 200, in _send_request + while self._needs_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 360, in _needs_retry + responses = self._event_emitter.emit( + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 412, in emit + return self._emitter.emit(aliased_event_name, **kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 256, in emit + return self._emit(event_name, kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/hooks.py", line 239, in _emit + response = handler(**kwargs) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 207, in __call__ + if self._checker(**checker_kwargs): + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 284, in __call__ + should_retry = self._should_retry( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 320, in _should_retry + return self._checker(attempt_number, response, caught_exception) + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 363, in __call__ + checker_response = checker( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 247, in __call__ + return self._check_caught_exception( + File "/opt/venv/lib/python3.10/site-packages/botocore/retryhandler.py", line 416, in _check_caught_exception + raise caught_exception + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 279, in _do_get_response + http_response = self._send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/endpoint.py", line 383, in _send + return self.http_session.send(request) + File "/opt/venv/lib/python3.10/site-packages/botocore/httpsession.py", line 493, in send + raise EndpointConnectionError(endpoint_url=request.url, error=e) +botocore.exceptions.EndpointConnectionError: Could not connect to the endpoint URL: "http://localstack:4566/cellxgene-bucket?prefix=123.cxg%2F&encoding-type=url" \ No newline at end of file diff --git a/22182/data/attachments/cc7ccde1b75c5c66.txt b/22261/data/attachments/dbe18d9c0526268c.txt similarity index 100% rename from 22182/data/attachments/cc7ccde1b75c5c66.txt rename to 22261/data/attachments/dbe18d9c0526268c.txt diff --git a/22261/data/attachments/dbefa2678d217c0f.txt b/22261/data/attachments/dbefa2678d217c0f.txt new file mode 100644 index 000000000000..d3a4a7b0b378 --- /dev/null +++ b/22261/data/attachments/dbefa2678d217c0f.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "55f2e489-7380-404d-b7d4-0534536a886e", "type": "REQUEST", "details": {"url": "/gene_info/v1/gene_info", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:20.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "55f2e489-7380-404d-b7d4-0534536a886e", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 137, "response_time": 0.0011870861053466797}} diff --git a/22261/data/attachments/dc448ade0d1e6c54.txt b/22261/data/attachments/dc448ade0d1e6c54.txt new file mode 100644 index 000000000000..f8b13dfa12a2 --- /dev/null +++ b/22261/data/attachments/dc448ade0d1e6c54.txt @@ -0,0 +1,2 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "2c0801c9-0a3d-47f7-987d-551c9393d97a", "type": "REQUEST", "details": {"url": "/dp/v1/auth/key", "method": "GET", "content_length": null}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:22.008Z", "name": "corpora-api-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "2c0801c9-0a3d-47f7-987d-551c9393d97a", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 0, "response_time": 0.0008132457733154297}} diff --git a/22261/data/attachments/dcff64af74840c4a.txt b/22261/data/attachments/dcff64af74840c4a.txt new file mode 100644 index 000000000000..0579935d623e --- /dev/null +++ b/22261/data/attachments/dcff64af74840c4a.txt @@ -0,0 +1 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:32.008Z", "name": "root", "message": "No Crossref API key found, skipping metadata fetching.", "lineno": 67, "pathname": "/single-cell-data-portal/backend/common/providers/crossref_provider.py", "request_id": ""} diff --git a/22261/data/attachments/dd9cbd430a733ce1.txt b/22261/data/attachments/dd9cbd430a733ce1.txt new file mode 100644 index 000000000000..b37816ea16d4 --- /dev/null +++ b/22261/data/attachments/dd9cbd430a733ce1.txt @@ -0,0 +1,68 @@ +{"levelname": "INFO", "asctime": "2024-10-08T12:54:43.008Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3a96703e-ecf2-48ec-8733-2ebbcf679c8b", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 623}} +RemoteConfigWorker created with polling interval 5 +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:44.008Z", "name": "ddtrace.internal.remoteconfig.worker", "message": "RemoteConfigWorker created with polling interval 5", "lineno": 37, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/worker.py", "request_id": "3a96703e-ecf2-48ec-8733-2ebbcf679c8b"} +[1][P: 0] Register ASM Remote Config Callback +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:44.008Z", "name": "ddtrace.appsec._remoteconfiguration", "message": "[1][P: 0] Register ASM Remote Config Callback", "lineno": 65, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/appsec/_remoteconfiguration.py", "request_id": "3a96703e-ecf2-48ec-8733-2ebbcf679c8b"} +[PID 1] Subscriber ASM initialized +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:44.008Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1] Subscriber ASM initialized", "lineno": 30, "pathname": "/usr/local/lib/python3.10/dist-packages/ddtrace/internal/remoteconfig/_subscribers.py", "request_id": "3a96703e-ecf2-48ec-8733-2ebbcf679c8b"} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:46.008Z", "name": "corpora-api-de-test", "message": "", "lineno": 88, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "3a96703e-ecf2-48ec-8733-2ebbcf679c8b", "type": "RESPONSE", "details": {"status_code": 200, "content_length": 4310278, "response_time": 3.1426923274993896}} +{"levelname": "INFO", "asctime": "2024-10-08T12:54:46.008Z", "name": "corpora-api-de-test", "message": "", "lineno": 76, "pathname": "/single-cell-data-portal/backend/common/server/config.py", "request_id": "5857afc0-96d9-4def-a833-08eabb1c5880", "type": "REQUEST", "details": {"url": "/de/v1/differentialExpression", "method": "POST", "content_length": 631}} +[PID 1 | PPID 0] Subscriber ASM is getting data +{"levelname": "DEBUG", "asctime": "2024-10-08T12:54:47.008Z", "name": "ddtrace.internal.remoteconfig._subscribers", "message": "[PID 1 | PPID 0] Subscriber ASM is getting data", 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-122, -121, -120,\n -119, -118, -117, -116, -115, -114, -113, -112, -111, -110, -109,\n -108, -107, -106, -105, -104, -103, -102, -101, -100, -99, -98,\n -97, -96, -95, -94, -93, -92, -91, -90, -89, -88, -87,\n -86, -85, -84, -83, -82, -81, -80, -79, -78, -77, -76,\n -75, -74, -73, -72, -71, -70, -69, -68, -67, -66, -65,\n -64, -63, -62, -61, -60, -59, -58, -57, -56, -55, -54,\n -53, -52, -51, -50, -49, -48, -47, -46, -45, -44, -43,\n -42, -41, -40, -39, -38, -37, -36, -35, -34, -33, -32,\n -31, -30, -29, -28, -27, -26, -25, -24, -23, -22, -21,\n -20, -19, -18, -17, -16, -15, -14, -13, -12, -11, -10,\n -9, -8, -7, -6, -5, -4, -3, -2, -1, 0, 1,\n 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23,\n 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34,\n 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45,\n 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56,\n 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67,\n 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,\n 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100,\n 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122,\n 123, 124, 125, 126, 127, -128, -127, -126, -125, -124, -123,\n -122, -121, -120, -119, -118, -117, -116, -115, -114, -113, -112,\n -111, -110, -109, -108, -107, -106, -105, -104, -103, -102, -101,\n -100, -99, -98, -97, -96, -95, -94, -93, -92, -91, -90,\n -89, -88, -87, -86, -85, -84, -83, -82, -81, -80, -79,\n -78, -77, -76, -75, -74, -73, -72, -71, -70, -69, -68,\n -67, -66, -65, -64, -63, -62, -61, -60, -59, -58, -57,\n -56, -55, -54, -53, -52, -51, -50, -49, -48, -47, -46,\n -45, -44, -43, -42, -41, -40, -39, -38, -37, -36, -35,\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype=int8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"379caab04c6479b8","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192392,"stop":1728392192392,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"69639c0f0628fe08","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192395,"stop":1728392192396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6ed8856500db790d","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192399,"stop":1728392192399,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"28996fc756fe2545","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192405,"stop":1728392192406,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"78c3d7171666fedb","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192411,"stop":1728392192411,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"2f88276bcd87edbc","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192415,"stop":1728392192415,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"f2317c49393928c9","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192418,"stop":1728392192419,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"6bceed1cc65e310e","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192424,"stop":1728392192424,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"106a99eebd7eb867","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192430,"stop":1728392192430,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"7fb241e9e25b2554","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192434,"stop":1728392192434,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b082187bd1e11ff1","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192437,"stop":1728392192437,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"a21cb7a44ca1498f","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192442,"stop":1728392192443,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"2c9f208576b28d30","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192449,"stop":1728392192449,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"cba302009db36f8d","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192453,"stop":1728392192453,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"adc4b721272419aa","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192456,"stop":1728392192456,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"843f48f8616dbe98","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192462,"stop":1728392192462,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"de5a1dfa37a80e0c","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192468,"stop":1728392192468,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"a961625ad1ab9700","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192472,"stop":1728392192472,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"10358953fa369718","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192475,"stop":1728392192475,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"4172b71541ae5f27","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192481,"stop":1728392192481,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"3ffa4db491257821","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192487,"stop":1728392192488,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"72a908dc2c2546c6","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192491,"stop":1728392192492,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"b8f228846032ca59","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192495,"stop":1728392192495,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"8e415c7d31e993cf","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192500,"stop":1728392192501,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"c1c7deda814ce757","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192507,"stop":1728392192507,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"36a3e3dbf003bfde","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192511,"stop":1728392192511,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"5cf447cc8545673c","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192514,"stop":1728392192515,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"5966bb5ecd61ca7f","parentUid":"b1a8273437954620fa374b796ffaacdd","status":"passed","time":{"start":1728392192520,"stop":1728392192520,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 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'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"379caab04c6479b8","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192392,"stop":1728392192392,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"69639c0f0628fe08","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192395,"stop":1728392192396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6ed8856500db790d","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192399,"stop":1728392192399,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"28996fc756fe2545","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192405,"stop":1728392192406,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"78c3d7171666fedb","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192411,"stop":1728392192411,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"2f88276bcd87edbc","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192415,"stop":1728392192415,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"f2317c49393928c9","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192418,"stop":1728392192419,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"6bceed1cc65e310e","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192424,"stop":1728392192424,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"106a99eebd7eb867","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192430,"stop":1728392192430,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"7fb241e9e25b2554","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192434,"stop":1728392192434,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b082187bd1e11ff1","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192437,"stop":1728392192437,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"a21cb7a44ca1498f","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192442,"stop":1728392192443,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"2c9f208576b28d30","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192449,"stop":1728392192449,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"cba302009db36f8d","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192453,"stop":1728392192453,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"adc4b721272419aa","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192456,"stop":1728392192456,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"843f48f8616dbe98","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192462,"stop":1728392192462,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"de5a1dfa37a80e0c","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192468,"stop":1728392192468,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"a961625ad1ab9700","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192472,"stop":1728392192472,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"10358953fa369718","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192475,"stop":1728392192475,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"4172b71541ae5f27","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192481,"stop":1728392192481,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"3ffa4db491257821","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192487,"stop":1728392192488,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"72a908dc2c2546c6","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192491,"stop":1728392192492,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"b8f228846032ca59","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192495,"stop":1728392192495,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"8e415c7d31e993cf","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192500,"stop":1728392192501,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"c1c7deda814ce757","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192507,"stop":1728392192507,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"36a3e3dbf003bfde","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192511,"stop":1728392192511,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"5cf447cc8545673c","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192514,"stop":1728392192515,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"5966bb5ecd61ca7f","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192520,"stop":1728392192520,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 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'expected_schema_hint': {'type': 'categorical'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters85]","uid":"14faa098a2ba590f","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192762,"stop":1728392192763,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': [0, 1, NaN]\nCategories (2, int64): [0, 1], 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'categorical'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters86]","uid":"faf2ef6ec609da80","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192767,"stop":1728392192768,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 NaN\n2 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'categorical'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters90]","uid":"4cb2822719b345cd","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192787,"stop":1728392192788,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":1,"retriesStatusChange":false,"parameters":["{'data': 0 0.0\n1 NaN\n2 2.0\ndtype: category\nCategories (2, float64): [0.0, 2.0], 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'categorical'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters91]","uid":"6a5a05af3f289781","parentUid":"d9286f96f847b733843d3f5d189d0a6b","status":"passed","time":{"start":1728392192792,"stop":1728392192793,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': [0.0, 1.0, NaN]\nCategories (2, float64): [0.0, 1.0], 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}"],"tags":[]}],"uid":"d9286f96f847b733843d3f5d189d0a6b"}],"uid":"9f8e82f14f7da08f327224bb8696a9c5"}],"uid":"tests.unit"}],"name":"packages"} \ No newline at end of file diff --git a/22261/data/suites.csv b/22261/data/suites.csv new file mode 100644 index 000000000000..af192ed36fb0 --- /dev/null +++ b/22261/data/suites.csv @@ -0,0 +1,1532 @@ +"Status","Start Time","Stop Time","Duration in ms","Parent Suite","Suite","Sub Suite","Test Class","Test Method","Name","Description" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__published_doi_used_if_exists_for_preprint","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-://]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","43","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_published_ok"," + If published filter flag is True, only published, non-tombstoned collections should be returned + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_published_version_by_collection_id"," + GET /collections/:collection_id retrieves the published version given a canonical collection_id + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","15","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_deleted_collection_does_not_appear_in_collection_lists","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","19","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_does_not_call_crossref_in_test","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","139","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_dynamic_fields","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection_verify_consortia_sorted__OK_2","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__valid_input_metadata_copy"," + Test case for verifying the required metadata is present + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","TestTypeConversionUtils","","","test__get_schema_type_hint_from_dtype","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-.com]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__remove_all_collection_consortia","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[lab_website-https://www.google.com]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__404","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_filter_issues_with_openprs","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_public_collection","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","4","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_h5ad_status_1","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","10","tests.unit.processing","test_rollback","","","","test_rollback_published_collections","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters82]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","19","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_in_a_tombstoned_collection_410","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","2","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_missing_collection","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__no_auth","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_with_no_match","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","38","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_published_dataset__405"," + A Dataset that has been published cannot be deleted via the API + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__create_key__201","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_resurrect_collection_ok"," + A tombstoned Collection can be resurrected + " +"passed","Tue Oct 08 12:59:20 GMT 2024","Tue Oct 08 12:59:27 GMT 2024","6830","tests.unit.backend.cellguide.pipeline","test_metadata_generator","TestMetadataGenerator","","","test__cell_metadata_generator","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","36","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_published_dataset_cxg_admin"," + cxg_admin role can delete published Datasets during revisions using query_param flag 'delete_published=true' + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters33]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__FAILURE","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Not_Owner","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_datasets_nonexistent_collection_4xx","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_rds_status_0","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters92]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Not_Public","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","4","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__new_dataset_version_bad_processing_status","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","43","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_but_is_in_env_and_use_env_is_not_set_we_raise","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_update_non_owned_private_collection_as_super_curator__ok","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_sets_is_auto_version_False"," + When publishing a collection version, is_auto_version should be set to False + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[@.]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_dataset_failing_validation","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","9","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_raw_h5ad","" +"passed","Tue Oct 08 12:56:09 GMT 2024","Tue Oct 08 12:56:09 GMT 2024","34","tests.unit.wmg_processing","test_filter_relationships","FilterRelationshipsTests","","","test_filter_relationships","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@place.]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters0]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters34]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_generate_dataset_citation","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","12","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__ok","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","74","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__explorer_portal_integration"," + Tests the explorer <-> portal integration. + The steps carried out by this test are: + 1. Generate the explorer_url + 2. Call the `get_dataset_identifiers` endpoint, retrieve `collection_id` and `dataset_id` from there + 3. Call the GET /collections/:collection_id endpoint, locate the dataset + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters71]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","19","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_removed_datasets__OK"," + Publish a revision with delete datasets. + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_with_collection_201","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-.com]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test_from_link__403"," + Calling PUT /datasets/:dataset_id should fail if version IDs are used for unpublished collections or + for referencing datasets + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters60]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__release_only_prerelease_properly_formatted_semvar__returns_false","" +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_missing_organism__request_returns_400","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters32]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","29","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_in_a_collection","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__missing_collection_id__raises_error","" +"passed","Tue Oct 08 12:54:46 GMT 2024","Tue Oct 08 12:54:50 GMT 2024","3759","tests.unit.wmg_processing","test_dataset_metadata","DatasetMetadataTests","","","test_dataset_metadata","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_all_collections_published_does_not_retrieve_old_versions"," + `get_collections` with is_published=True should not return versions that were previously + published but have a new version + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters84]","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_h5ad_status_0","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__restore_previous_collection_version"," + Test restoring a previous version of a collection + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","15","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters8]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-://]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","12","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_1","The 'revising_in' attribute is None for unauthorized public collections" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_ok"," + The order of the datasets in a collection version is set using `set_collection_version_datasets_order`. + " +"passed","Tue Oct 08 12:54:27 GMT 2024","Tue Oct 08 12:54:27 GMT 2024","13","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_init_of_unknown_secret_does_not_set_secret_metadata","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","8","tests.unit.processing","test_process_download","TestProcessDownload","","","test_process_download_success"," + ProcessValidate should: + 1. Download the h5ad artifact + 2. Set upload status to UPLOADED + 3. upload the original file to S3 + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","18","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__check_owner__auth","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_with_owner_ok"," + Only collection versions with the specified owner should be returned, including both published and unpublished + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_sanitized_ok"," + The dataset artifact metadata can be updated with sanitized values. + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_returns_canonical_id"," + POST /datasets returns the canonical dataset id on creation. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:28 GMT 2024","5775","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__markers_returns_200_and_correct_response","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","47","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_and_is_in_env_and_use_env_is_set_we_use_env","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[55-30]"," + Test the cropping method to ensure the image is cropped to a square + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_private","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_public_collection_405","" +"passed","Tue Oct 08 12:59:33 GMT 2024","Tue Oct 08 13:03:01 GMT 2024","208265","tests.unit.backend.cellguide.pipeline","test_ontology_tree","OntologyTreeBuilderTests","","","test__ontology_tree_builder","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","19","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_all_tissues_have_all_cell_types_except_root_cell_type-input_cell_counts_df5-expected_cell_counts_df5-input_gene_expr_df5-expected_gene_expr_df5]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[@place.com]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi__OK","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_timedelta","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args1]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters93]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__Not_Owner"," + Calling PUT /datasets/:dataset_id should fail with 403 Unauthorized + if the authenticated user is not the owner of a collection + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_partial_data__OK","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","117","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_no_corpora_and_dense","" +"passed","Tue Oct 08 12:55:01 GMT 2024","Tue Oct 08 12:55:02 GMT 2024","406","tests.unit.backend.wmg","test_query","QueryPrimaryFilterDimensionsTest","","","test__single_dimension__returns_all_dimension_and_terms","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters54]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__by_collection_version_id","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection_options__allow","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","200","tests.unit.backend.layers.utils","test_aws","TestDeleteManyFromS3","","","test_delete_from_s3_deletes_all_files","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_parses_authors_and_dates_correctly","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_not_owner_403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_dataset_not_owner__403","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_datetime","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_with_rdev_prefix","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[doi-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_version__already_deleted__403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_create_empty_dataset_version_for_current_dataset__error_if_published","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","13","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_fullpath[/tmp]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_migration_revision","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_consortia","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth_visibility_private__403","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_same_doi_publisher_metadata_not_updated_ok"," + When publishing a revision - and there is no change in DOI - publisher metadata should not be + updated if the deposited date is before the revised at or originally published at date of the + corresponding collection. + " +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","26","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__copies_index_of_obs_and_var_to_column","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__add_new_collection_consortia","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[]","Check that all artifacts are deleted for the given cases." +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters9]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link__202","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_with_blocked_issues","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_index","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_missing_title_error"," + Attempting to update a dataset without providing a title raises an exception. + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_strip_string_fields","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_public_collection_verify_fix_consortia_sort_order_OK","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_same_doi_publisher_metadata_updated_ok"," + When publishing a private collection - and there is no change in DOI - publisher metadata should be + updated if the deposited date is after the created at date of the corresponding collection. + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_no_assets","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_published","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","32","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_revision__ok","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_id_owner__OK"," + Processing starts when an update of a dataset is uploaded by its ID by the collection owner. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-.com]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","33","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_unknown_secret_raises_exception","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_unauthenticated__401","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_logger","","","","test_log_suppressed__caught","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_blank_fields","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCuratorJSONEncoder","","","test_datetime","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_user_collections_for_index_requires_auth","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-.com]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_tombstoned__410","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters51]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","88","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_filter_dims__returns_valid_filter_dims__base_case","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_same_doi_does_not_update_metadata","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ2-dp-test-ingest-process-fake_dataset_id]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","52","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_shape","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_generate_dataset_citation__no_doi","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_version_from_canonical_published_ok"," + `get_collection_version_from_canonical` retrieves the active published version connected + to the canonical collection, when available + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_hires"," + Test that _fetch_image returns the hires image when fullres is not present. + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_math_utils","TestMathUtils","","","test__sizeof_formatted__converts_to_gb","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","1","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__validate_with_invalid_s3_uri__returns_none","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__upload_assets"," + Test upload assets to S3 + " +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_without_error_cause","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCuratorJSONEncoder","","","test_datetime_with_millis","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__not_download_validate","Check that file in the artifact bucket are not delete if error_step is not download-validate." +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_invalid_error_cause","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_version_from_canonical"," + Get currently published dataset version using canonical dataset ID, or most recent active unpublished dataset + if none are published. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","6","tests.unit.processing","test_spatial_assets_utils","","","","test__process_and_flip_image"," + Test the image processing method + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_with_published_collection","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__restore_previous_collection_version__no_previous_versions"," + Test restoring a previous version of a collection fails when there are no previous versions + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_get_order_custom_sort__OK","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","57","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetIdVersions","","","test_get_dataset_id_version_4xx","" +"passed","Tue Oct 08 12:57:50 GMT 2024","Tue Oct 08 12:57:57 GMT 2024","6589","tests.unit.backend.cellguide.pipeline","test_canonical_marker_genes","CanonicalMarkerGeneCompilerTests","","","test__canonical_marker_genes","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_ok"," + A dataset artifact can be updated using `update_dataset_artifact` + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","1","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__new_from_link__OK"," + Calling PUT /datasets/:dataset_id should succeed if a valid link is uploaded by the owner of the collection or + a super curator + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_replaced_dataset_ok"," + Publishing a version with a dataset replaced should succeed + " +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","319","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_agg_tissue_counts__returns_correct_result","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_dataset_failing_pipeline","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","0","tests.unit.backend.common","test_common","","","","test_remove_duplicate_dataset_assets_no_duplicates","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:39 GMT 2024","2521","tests.unit.wmg_processing","test_cell_type_ordering","CellTypeOrderingTests","","","test_cell_type_orderings","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","24","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__no_copy_if_var_index_name_already_in_columns","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","5","tests.unit.processing","test_spatial_assets_utils","","","","test__create_deep_zoom_assets","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query3-expected_sanitized_query3]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@.]","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_with_blocking_issues_in_issue_list","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters12]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_key_error"," + Test that _fetch_image raises KeyError when neither fullres nor hires images are present. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[protocol-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters68]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_private_collection","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters91]","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","6","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__error_if_missing_raw_h5ad","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__can_publish_owned_collection","" +"passed","Tue Oct 08 12:56:01 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","27825","tests.unit.processing","test_handle_error","","","","test_non_migration_event_triggers_slack","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-://]","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters89]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","13","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_singletonness","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_revision_collection_fields","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","1","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__prerelease_properly_formatted_semvar__returns_true","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_is_auto_version_succeeds"," + Given a canonical collection with a published version and no unpublished versions, + creating an unpublished collection version where is_auto_verison is True will succeed. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_query_key_not_specified_in_api_spec_returns_400","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__200","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters50]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","40","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_revision_collection_by_collection_version_id","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters26]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test_link_public_collection__403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_empty_dataset_ok"," + An empty dataset can be added to a collection when `create_empty_dataset` is called. + The resulting dataset should be empty and in a state ready for processing. + " +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:35 GMT 2024","467","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_no_genes__returns_200_and_correct_response","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters17]","" +"skipped","Tue Oct 08 12:57:57 GMT 2024","Tue Oct 08 12:57:57 GMT 2024","0","tests.unit.backend.cellguide.pipeline","test_computational_marker_genes","MarkerGeneCalculatorTests","","","test__marker_gene_calculation","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","1013","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_extract_metadata","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters52]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_delete_non_owned_private_collection_as_super_curator__ok","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__remove_collection__consortia__OK","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_ignores_metadata_if_no_doi","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_public_collection_fields","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters55]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","79","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_tombstone_collection","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","40","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_all_tissues_have_all_cell_types-input_cell_counts_df0-expected_cell_counts_df0-input_gene_expr_df0-expected_gene_expr_df0]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","12","tests.unit.processing","test_rollback","","","","test__clean_up","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","2","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__giant_matrix_returns_false_early","" +"passed","Tue Oct 08 12:54:49 GMT 2024","Tue Oct 08 12:54:55 GMT 2024","5943","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_marker_genes_cube__returns_correct_all_markers","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-https://]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_email[email@.com]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_not_authorized_403","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_invalid_processing_status__405","" +"passed","Tue Oct 08 12:55:53 GMT 2024","Tue Oct 08 12:55:56 GMT 2024","3328","tests.unit.wmg_processing","test_expression_summary_and_cell_counts_diffexp","ExpressionSummaryDiffexpTests","","","test_expression_summary_diffexp","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__check_owner__no_auth","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","175","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__file_info__returns_file_size","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_replace_dataset_ok"," + Replacing a dataset in a collection version does not alter the custom order of the datasets. + " +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_false","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_super_202","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","2","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__nonexistent_dataset__raises_error","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestDatasetCurators","","","test__cancel_dataset_download__202_user_not_collection_owner_as_super_curator","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","2","tests.unit.processing","test_spatial_assets_utils","","","","test__generate_deep_zoom_assets"," + Test the method to generate deep zoom assets + " +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_true_and_fullres_false","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_partial__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_unpublished_collection_ok"," + A dataset can be added to a collection when `ingest_dataset` is called. + The resulting dataset should be empty and in a state ready for processing. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_published_collection_fail"," + Replacing a dataset that belongs to a published collection should fail + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[raw_data-https://www.google.com]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-://]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection__OK","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.utils","test_api_key","TestAPIKey","","","test_generate","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__201","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_version_from_canonical_unpublished_ok"," + `get_collection_version_from_canonical` retrieves the unpublished version connected + to the canonical collection, if no published version is available + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_noncanonical_raw_X","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","1030","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetIdVersions","","","test_get_dataset_id_versions_ok","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses_0","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_new_collection_no_doi_crossref_not_checked_ok"," + When publishing a new collection without a DOI, no Crossref check should be made. + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_true_fails"," + Given a canonical collection with a published version and an unpublished version where is_auto_version is True, + creating another unpublished collection version where is_auto_version is True will fail. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_as_not_owner__403"," + Publish a collection as a non-owner returns 403 + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_3","The 'revising_in' attribute is equal to the id of the revision Collection" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_published_collection_version_for_published_collection_ok"," + A published collection can be obtained using `get_collection` + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_missing_data_submission_policy_version__400"," + Checks for failure on missing data submission policy version. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestConcurrentUpdates","","","test_concurrency","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_ok"," + A collection version can be published using `publish_collection` + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_on_empty_dataset_does_not_generate_new_ok"," + Calling `ingest_dataset` and specifying an existing dataset that is empty should start the ingestion + without creating a new dataset version + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection_version__public__403","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update__error_if_published","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_index_with_ontology_expansion","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__dataset_does_not_exist","" +"passed","Tue Oct 08 12:54:35 GMT 2024","Tue Oct 08 12:54:35 GMT 2024","449","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_request_multi_primary_dims_only__returns_200_and_correct_response","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","96","tests.unit.backend.layers.business","test_business","TestGetAllDatasets","","","test_get_all_private_datasets_ok"," + Private datasets the user is authorized to view can be retrieved with `get_all_private_collection_versions_with_datasets`. + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection_by_version_id__403","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","2","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_api_fetch_calls"," + Mocks API key for NCBI requests, checks call counts and the correct external API calls. + Will break if the external API call is down! + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters76]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection__does_not_exist","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","25","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__reads_anndata_successfully","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_invalid_collection_404","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__release_only_properly_formatted_semvar__returns_true","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:55:45 GMT 2024","67697","tests.unit.backend.de.api","test_v1","DeAPIV1Tests","","","test__differentialExpression_returns_expected_results","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","45","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersionID","","","test_get_collection_version_4xx","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__PENDING","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_no_auth_401","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_ok"," + The dataset artifact metadata can be updated using `update_dataset_artifact_metadata` + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","3","tests.unit.processing","test_spatial_assets_utils","","","","test__create_deep_zoom_assets_exception","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","7","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_from_uri","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args2]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_adds_publisher_metadata","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-google]","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails"," + Asserts a CrossrefFetchException if the GET request fails for any reason + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_and_collection","" +"passed","Tue Oct 08 12:56:02 GMT 2024","Tue Oct 08 12:56:03 GMT 2024","1180","tests.unit.wmg_processing","test_expression_summary_default","ExpressionSummaryDefaultTests","","","test_expression_summary_default","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","33","tests.unit.backend.layers.business","test_business","TestGetEntitiesBySchema","","","test_get_latest_published_collection_versions_by_schema"," + Test fetching index of most recently published collection versions with datasets matching a given + CxG schema version + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-google.com]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id__403_not_found"," + GET /collections/:collection_id returns 403 if an invalid is specified + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","11","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_ok"," + A collection version can be created using `create_collection_version` + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-https://]","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_true_and_no_library_id","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_revision","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__partially_populated_dense_matrix_returns_false","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_collection_url","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_cxg","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_no_auth_401","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","54","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_custom_secret_name","" +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","69","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__primary_filter_dimensions__returns_200","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","13","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_ndarray_to_cxg_dense_array__writes_successfully","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","1","tests.unit.backend.common","test_citation","TestCitation","","","test__format_citation","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_invalid_status_error"," + Attempting to update a dataset with a non-success processing status raises an exception. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[data_source-https://www.google.com]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_wrong_status_fail"," + Calling `ingest_dataset` and specifying an existing dataset should fail if the dataset is not in the + final status + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_same_doi_publisher_metadata_not_updated_ok"," + When publishing a private collection - and there is no change in DOI - publisher metadata should not + be updated if the deposited date is before the created at date of the corresponding collection. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args0]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__INITIALIZED_as_PENDING","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_length_fail"," + Attempting to set the order of the datasets in a collection version with a list of different length should fail. + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","2","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection_verify_consortia_sorted__OK_1","" +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","191","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__primary_filter_dimensions__returns_valid_response_body","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters16]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth_visibility_public__OK","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_new_doi_updates_metadata","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-https://]","" +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_empty_request__returns_400","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","35","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_prior_published_versions_for_dataset"," + Given a canonical dataset id, return all its DatasetVersions that have been part of published CollectionVersions + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__bad_link__400","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","24","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__slash_in_attribute_name","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters78]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_unpublished_collection_ok"," + An unpublished collection version can be obtained using `get_collection_version` + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_fails_on_mismatching_dataset_schema_versions"," + `publish_collection_version` should fail if called on a collection version with datasets that have mismatching + schema versions + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters6]","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","14","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_fullpath[None]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_CollectionDeleteException_with_H5AD","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters13]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","11","tests.unit.scripts","test_tombstone","TestTombstone","","","test__resurrect_collection","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test_update_collection_with_empty_required_fields","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query4-expected_sanitized_query4]","" +"passed","Tue Oct 08 12:54:28 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","5844","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__markers_returns_200_and_empty_dictionary_for_bad_celltypes","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_all_removed_datasets__409"," + Unable to publish a revision with no datasets. + " +"passed","Tue Oct 08 12:55:01 GMT 2024","Tue Oct 08 12:55:01 GMT 2024","255","tests.unit.backend.wmg","test_query","QueryPrimaryFilterDimensionsTest","","","test__multiple_dimensions__returns_all_dimensions_and_terms_as_tuples","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters57]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_status_validation_message_ok"," + The dataset validation message can be updated using `update_dataset_status` + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__call_delete_dataset__twice","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_revision_with_no_previous_version","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","28","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_tombstoned_dataset_in_a_collection_410","" +"passed","Tue Oct 08 12:57:06 GMT 2024","Tue Oct 08 12:57:06 GMT 2024","1","tests.unit.wmg_processing","test_ontology_labels","OntologyLabelTests","","","test__gene_label","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection__ok","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","19","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others-input_cell_counts_df1-expected_cell_counts_df1-input_gene_expr_df1-expected_gene_expr_df1]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","14","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_extract_metadata_find_raw_layer","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_with_collection_version_id_403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters36]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters20]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__release_only_misformatted_version__returns_false","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-google.com]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","365","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_single_and_multi_valued__returns_correct_result","" +"skipped","Tue Oct 08 12:54:40 GMT 2024","Tue Oct 08 12:54:40 GMT 2024","0","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test_pipeline_creates_files"," + Test the pipeline successfully copies from mock s3, loads corpus and correctly builds cube/cell_ordering files + and correctly uploads files to mock s3 + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__401","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","1","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_enum","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_resurrect_collection_with_tombstoned_dataset_ok"," + Individually-tombstoned Datasets should remain tombstoned after resurrection of their parent Collection. + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_process_validate","ProcessingTest","","","test_populate_dataset_citation__no_publication_doi","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_not_owner__403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters105]","" +"passed","Tue Oct 08 12:57:06 GMT 2024","Tue Oct 08 12:57:09 GMT 2024","3149","tests.unit.wmg_processing","test_ontology_labels","OntologyLabelTests","","","test__ontology_term_label","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","20","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_unbpublished_revision__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_artifact_type_doesnt_match_regex","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_ok"," + A collection can be created using `create_collection` + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_partial_ok"," + `update_collection` should support partial updates: if only a subset of the fields are specified, + the previous field should not be modified + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__Not_Owner","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_published_collection_ok"," + A published collection version can be obtained using `get_collection_version` + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","31","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_revision_is_canceled"," + New Dataset assets and rows not deleted until after revision is canceled (for previously-published Collection) + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_pos","Positive test case for run method." +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args4]","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","0","tests.unit.backend.common","test_common","","","","test_remove_duplicate_dataset_assets","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_no_artifacts","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","1","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_unexpected_ncbi_responses","Correctly identifies a valid search result from NCBI" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__no_auth"," + Calling PUT /datasets/:dataset_id should fail with 401 Unauthorized if the user is not authenticated + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","15","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_not_published_canonical__404","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","10","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_labeled_h5ad","" +"passed","Tue Oct 08 12:54:26 GMT 2024","Tue Oct 08 12:54:27 GMT 2024","36","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_init_of_existing_secret_retrieves_secret_metadata","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_status_ok"," + The dataset processing status can be updated using `update_dataset_status` + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_private_collection_by_collection_version_id","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_remove_dataset_from_unpublished_collection_ok"," + A dataset can be removed from a collection version using `delete_dataset`. This should delete the dataset. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionUploadLinkCurators","","","test__can_upload_dataset_to_non_owned_collection_as_super_curator"," + A super curator can upload a dataset to a non-owned collection + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","35","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_unpublished_ok"," + If published filter flag is False, only unpublished collections should be returned + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","3","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_skip_unprocessed_datasets"," + Test that datasets that do not appear in the processed_datasets variable in log_errors_and_cleanup are skipped + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters1]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","1","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_correct_parse_xml_tree"," + Successfully parses a properly formatted XML tree for gene information + " +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","3","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_containing_tissue__request_returns_400","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__raw_h5ad_updated","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_while_processing_dataset__405","cannot reupload a dataset that is pending" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_revision_dataset__ok","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_on_non_existing_dataset_fail"," + Calling `ingest_dataset` and specifying a non existant dataset_version_id should fail + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:26 GMT 2024","2075","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_delete_of_existing_secret_deletes_secret","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","7","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_with_errors","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse_with_column_shift_encoding__giant_matrix_returns_false_early","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_invalid_dataset_fail"," + Attempting to set the order of the datasets in a collection version with a list that contains an invalid + dataset should fail. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","7","tests.unit.processing","test_processing","ProcessingTest","","","test_process_seurat_success","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_invalid_data_submission_policy_version__400"," + Checks for failure on submit of a data submission policy version that is not a valid version. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_published_collection_fail__dataset_status_pending"," + Updating a collection version with a DOI change IF there is a dataset in non-finalized status should fail + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","277","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_term_vs_label_colors","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__OK","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters61]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__private","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters11]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-.com]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_private","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_fails_if_data_missing","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters62]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionUtilities","","","test__delete_datasets_from_public_access_bucket"," + Test Dataset deletes when tombstoning a public Collection with published and updated Datasets in an outstanding + Revision + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters80]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","46","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_but_not_in_env_and_use_env_is_not_set_we_use_config","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters42]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters23]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_invalid_doi","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters96]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[lab_website-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_returns_id_on_success","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__collection_level_processing_status__SUCCESS","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_fails_with_extra_fields","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__verify_expected_private_collection_fields","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters97]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_version","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_delete_collection_version_ok"," + A collection version can be deleted using `delete_collection_version` + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters3]","" +"passed","Tue Oct 08 12:54:36 GMT 2024","Tue Oct 08 12:54:36 GMT 2024","169","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_total_cell_count_per_cell_type","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","2","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_with_issues_to_close","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[text\x01]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_links_ok"," + A collection with links can be created using `create_collection` + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_6","revision_of contains None if the collection is unpublished" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","12","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__invalid_artifact_status","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","6","tests.unit.backend.layers.api","test_app","TestAPI","","","test__dp_api_swagger_ui__returns_200","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_bad_links_fail"," + A collection where a link isn't a http URI cannot be created + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters7]","" +"passed","Tue Oct 08 12:54:29 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","2060","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_existing_deleted_secret_raises_exception","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters87]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__asset_NOT_FOUND","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[data_source-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_no_datasets","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","288","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test_download","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_valid_doi_ok"," + A collection can be created with a valid DOI, and the publisher metadata will be added + to the collection + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset__ok","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_revision__OK","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_rds_status_1","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision_nonexistent__403"," + Start a revision on a non-existing collection. + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","6","tests.unit.processing","test_process_validate","ProcessingTest","","","test_process_download_validate_success"," + ProcessDownloadValidate should: + 1. Download the h5ad artifact + 2. set validation status to VALID + 3. Set upload status to UPLOADED + 4. set h5ad status to UPLOADED + 5. upload the original file to S3 + 6. upload the labeled file to S3 + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__Not_Owner","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_add_dataset_artifact_ok"," + A dataset artifact can be added using `add_dataset_artifact` + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_migrate_private_collection","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","0","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_convert_color_to_hex_format","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","5","tests.unit.processing","test_processing","ProcessingTest","","","test_reprocess_cxg_success","" +"passed","Tue Oct 08 13:03:19 GMT 2024","Tue Oct 08 13:03:19 GMT 2024","9","tests.unit.backend.cellguide.pipeline","test_valid_explorer_cxgs","TestValidExplorerCxgs","","","test__valid_explorer_cxgs","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_unpublished_version"," + If a collection is unpublished, GET /collections/:collection_id retrieves the unpublished version + when passed the canonical collection_id + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__no_auth","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","23","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_user_collections_for_index"," + The `my-collections/index` endpoint should return all public collections and the private + collections the user has WRITE access to. Curators can see all public collectoins and private collections where + they are the owner. Super Curators can see all public and private collections. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters31]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_artifact_download_data_ok"," + Calling `get_dataset_artifact_download_data` should yield downloadable data + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_same_doi_publisher_metadata_updated_ok"," + When publishing a revision - and there is no change in DOI - publisher metadata should be updated + if the deposited date is after the revised at or published at date of the corresponding collection. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[raw_data-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters35]","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","17","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_cxg__with_spatial_deepzoom_assets","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_checker_call"," + Successfully calls GeneChecker if called with only a name parameter + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ1-dp-test-stack-ingest-process-fake_dataset_id]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","0","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_parse_xml_tree_missing_values"," + Returns correct dictionary with missing values if given XML tree with missing values + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-google.com]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_private_collection_crossref_checked_ok"," + When publishing a new collection with a DOI, a Crossref check should be made. + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","0","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_checker"," + GeneChecker successfully creates a dictionary of gene names to gene IDs, + checks validity of gene names, and returns ensembl ID for a gene name. + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","37","tests.unit.backend.layers.api","test_portal_api","TestDeleteRevision","","","test__revision_deleted__204"," + Delete a collection under revision. + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","4","tests.unit.backend.layers.api","test_app","TestAPI","","","test__catchall_exception_handler","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_sorts_consortia","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_process_download","","","","test_create_batch_job_definition_parameters","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__create_key__401","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_user_datasets_for_index_requires_auth","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_missing_datasets__400","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-https://]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_published_collection_fail"," + Updating a collection version that is published should fail + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_unsupported_type","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_only_private_collections_with_auth__OK","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_log_errors_and_cleanup","TestLogErrorsAndCleanup","","","test_OK","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","367","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_all_indexed_dims_multi_valued__returns_correct_result","" +"passed","Tue Oct 08 12:57:15 GMT 2024","Tue Oct 08 12:57:16 GMT 2024","591","tests.unit.wmg_processing","test_primary_filter_dimensions","PrimaryFilterDimensionsTests","","","test_primary_filter_dimensions","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-google]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","10","tests.unit.processing","test_rollback","","","","test_rollback_private_collections","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__zero_and_one_hundred_percent_threshold","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__delete_public_dataset_returns__405","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters83]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_mixed_collection_types","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","21","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__links__OK","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_private_restoring_previously_replaced_dataset","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","4","tests.unit.processing","test_processing","ProcessingTest","","","test_process_cxg_success","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionUploadLinkCurators","","","test__can_reupload_dataset_as_super_curator"," + A super curator can reupload a dataset to a non-owned collection + " +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestCloseReadyForProd","","","test_close_ready_for_prod_no_issues","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","0","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_rel_path","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-https://]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","25","tests.unit.backend.layers.api","test_portal_api","TestDeleteRevision","","","test__delete_revision_unauth__403"," + An unauthorized user should not be able to delete a collection revision + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","12","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__dense_array_writes_successfully","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_super","" +"skipped","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_auth0_manager","TestSession","","","test_session_refresh","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters56]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__OK","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_400","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters72]","" +"passed","Tue Oct 08 12:54:40 GMT 2024","Tue Oct 08 12:54:40 GMT 2024","3","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test_exception_handle_catches_errors","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[100-55]"," + Test the cropping method to ensure the image is cropped to a square + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","65","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_all_datasets_200","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","20","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all-input_cell_counts_df3-expected_cell_counts_df3-input_gene_expr_df3-expected_gene_expr_df3]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_public_dataset__403","cannot reupload a public published dataset" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__dataset_NOT_FOUND","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters85]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_all_datasets_ok"," + All dataset that belong to a published collection can be retrieved with `get_all_mapped_datasets` + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_fails_on_published_collection"," + `publish_collection_version` should fail if called on a collection version that is already published. + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_canonical_id__OK"," + Processing starts when an update of a dataset is uploaded using canonical ids + + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","3","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset[False]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_published_dataset__fail","" +"passed","Tue Oct 08 12:54:39 GMT 2024","Tue Oct 08 12:54:40 GMT 2024","1145","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test__pipeline_fails_if_census_schema_version_unsupported","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__fetch_image_fullres"," + Test that _fetch_image returns the fullres image when present. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters28]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__delete_uploaded_dataset__ok","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__Not_Private","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","2","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__existing_from_link__OK"," + Calling PUT /datasets/:dataset_id on an existing dataset_id should succeed if a valid link is uploaded by the + owner of the collection or a super curator + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","7","tests.unit.backend.layers.api","test_app","TestAPI","","","test__curation_api_swagger_ui__returns_200","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","13","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_published_dataset_during_revision__202"," + Reupload a published dataset during a revision + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","8","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision_by_collection_version_id_403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters48]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision_not_owner__403"," + Start a revision on a collection as a non-owner. + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[other-http://somewhere.org/path/?abcd=123]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_version_id_none","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_owner_202","" +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","449","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__query_request_with_compare_by_ethnicity__excludes_comma_delimited_ethnicity_values","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_status_for_uploaded_dataset_ok"," + Calling `get_dataset_status` should yield the processing status + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__upload_update_by_dataset_id_super__OK"," + Processing starts when an update of a dataset is uploaded by its ID by a super curator + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_artifacts_delete_h5ad","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","12","tests.unit.backend.layers.api","test_curation_api","TestPutLink","","","test__from_link__Not_Public"," + Calling PUT /datasets/:dataset_id should fail with 403 Unauthorized + if trying to upload to a published collection + " +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","165","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_explicit_cell_ordering__returns_correct_cell_ordering","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_rollback","","","","test_rollback[rollback_args3]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","12","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_not_in_env_we_raise","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","1","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_positive","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","10","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_publication_of_private_collection"," + Outdated, unused Dataset assets and rows in private Collection not deleted until after Collection is published + " +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","0","tests.unit.backend.wmg.data","test_snapshot","","","","test_get_wmg_snapshot_schema_dir_rel_path","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-google.com]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters39]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__reupload_unpublished_dataset__202"," + Reuploads an unpublished dataset + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi_is_not_CURIE_reference__BAD_REQUEST","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_private_with_no_previous_version","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters22]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","3","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__published_with_revision","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","18","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_dataset_by_canonical_id"," + Calling DELETE /collections/:collection_id/datasets/:dataset_id should work according to the + auth token passed and when using canonical ids. In this case, the unpublished collection + version will be looked up and used for deletion. + " +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","15","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__non_h5ad_raises_exception","" +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","0","tests.unit.scripts","test_zenhub_close","","","","test_format_issue","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__dataset_meta__404","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_migrate_published_collection","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","2","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__elete_many_from_s3_error","Check that delete_many_from_s3 errors are logged but do not raise exceptions." +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__regenerate_key__201","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__invalid_input_metadata_copy"," + Test case to verify that a KeyError is raised when passing invalid input metadata + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","29","tests.unit.wmg_processing","test_cell_type_ancestors","CellTypeAncestorTests","","","test_cell_type_ancestors","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","18","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_cleanup_with_auto_version"," + When publishing an auto_version, do NOT cleanup dataset versions from an open revision + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_dataset_artifacts_ok"," + Artifacts belonging to a dataset can be obtained with `get_dataset_artifacts` + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","9","tests.unit.backend.layers.business","test_business","TestDatasetArtifactMetadataUpdates","","","test_trigger_dataset_artifact_update__with_new_dataset_version_id","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_json","TestCustomJSONEncoder","","","test_illegal_characters","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","0","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_not_found_doi_fail"," + A collection with a DOI that cannot be found on Crossref will not be created + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","136","tests.unit.backend.layers.utils","test_aws","TestDeleteManyFromS3","","","test_delete_from_s3_raises_error_for_missing_dataset_id","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_strip_string_fields__OK","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_collection_with_no_datasets_fail"," + Publishing a collection version with no datasets should fail + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[None]","Check that all artifacts are deleted for the given cases." +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters10]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","227","tests.unit.backend.layers.utils","test_aws","TestDeleteManyFromS3","","","test_delete_from_s3_handles_no_files","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_collection__not_owner","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","1","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__non_owner__raises_error","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_with_no_datasets","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters44]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters79]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_from_dropbox_uri"," + Call process download using a dropbox uri + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","3","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset[True]","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","55","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetVersion","","","test_get_dataset_version_4xx","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_update_crossref_metadata_changed_doi_returns_doi_update_ok"," + The check for changes in Crossref returns the existing DOI and the returned Crossref DOI if there is a + change between the two. + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__Super_Curator","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_remove_doi_deletes_metadata","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_report","","","","test_report","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_rollback","","","","test_rollback__unsupported_rollback_type","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_2","The 'revising_in' attribute is None for collections which lack a revision" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__rds_skipped","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_with_invalid_link_fail"," + Adding a dataset with a wrong link should result in a failure + " +"passed","Tue Oct 08 12:54:55 GMT 2024","Tue Oct 08 12:55:01 GMT 2024","6014","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_marker_genes_cube__returns_correct_top_10_markers","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_invalid_title_error"," + Attempting to update a dataset with an invalid title raises an exception. + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","43","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_not_in_config_but_is_in_env_and_use_env_is_set_we_use_env","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-.com]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_collection_with_x_approximate_distribution_none__OK","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__strip_string_fields","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters46]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[text\x1f]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","2801","tests.unit.processing","test_processing","ProcessingTest","","","test_process_all","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters38]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_process_validate","ProcessingTest","","","test_process_validate_fail"," + If the validation is not successful, the processing pipeline should: + 1. Set the processing status to INVALID + 2. Set a validation message accordingly + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_changed_doi_collection_updated_ok"," + When publishing a revision - and there is a change in DOI - collection and artifacts should be updated. + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_all_datasets_for_user_index","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_ok"," + A collection version should be updated when using `update_collection` + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters75]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDatasetCurators","","","test__get_status__200_for_non_owned_dataset_as_super_curator","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters37]","" +"passed","Tue Oct 08 12:56:16 GMT 2024","Tue Oct 08 12:57:06 GMT 2024","50490","tests.unit.wmg_processing","test_marker_genes","MarkerGenesTests","","","test_marker_genes_cube","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","3","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection__403","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_create_migration_revision__published_no_revision","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_with_invalid_collection_consortia","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters43]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","390","tests.unit.processing","test_color_conversion_utils","TestColorConversionUtils","","","test_anndata_colors_to_cxg_colors","" +"passed","Tue Oct 08 12:54:57 GMT 2024","Tue Oct 08 12:55:46 GMT 2024","49256","tests.unit.wmg_processing","test_expression_summary_and_cell_counts","ExpressionSummaryAndCellCountsTests","","","test_expression_summary_and_cell_counts","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostDataset","","","test_post_datasets_nonexistent_collection_403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_fake_collection__403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","39","tests.unit.backend.layers.business","test_business","TestGetAllCollections","","","test_get_all_collections_unfiltered_ok"," + All the collection versions for all collections should be returned by `get_collections`, including published, + unpublished, and all owners. + " +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:43 GMT 2024","5744","tests.unit.backend.wmg","test_query","CensusCubeQueryParamsTest","","","test__cube_query_params_for_expression_summary_cube","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters19]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","126","tests.unit.backend.layers.api","test_curation_api","TestPostRevision","","","test__post_revision__OK","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters49]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.api","test_version","TestVersion","","","test_get","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__update_collection_links__OK","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_no_doi_crossref_not_checked_ok"," + Crossref should not be called to check for updates to the publisher metadata when publishing + a revision that has no DOI. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","16","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_published_dataset_in_revision__success","" +"passed","Tue Oct 08 12:59:27 GMT 2024","Tue Oct 08 12:59:33 GMT 2024","5744","tests.unit.backend.cellguide.pipeline","test_metadata_generator","TestMetadataGenerator","","","test__tissue_metadata_generator","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","23","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__start_revision_of_a_collection_w_links__201"," + Start a revision of a collection with links. + " +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_revision_dataset_owner_202","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","10","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_published_collection__403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","21","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_new_dataset_in_revision__ok","" +"passed","Tue Oct 08 12:54:35 GMT 2024","Tue Oct 08 12:54:36 GMT 2024","374","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_request_multi_primary_dims_only_with_compare__returns_200_and_correct_response","" +"passed","Tue Oct 08 12:57:57 GMT 2024","Tue Oct 08 12:59:18 GMT 2024","81184","tests.unit.backend.cellguide.pipeline","test_gpt_descriptions","TestGptDescriptionGenerator","","","test__gpt_description_generator","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters15]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_published_collection__ok","Published collections are tombstoned." +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","9","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_h5ad","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__oversized__413","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","93","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_different_var_index_than_h5ad","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters95]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_status__403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_bad_id__403"," + Publish a collection with a bad uuid (non existant) returns 403 + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_removed_dataset_ok"," + Publishing a version with a dataset removed should succeed + " +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_empty_event","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__links_None_does_not_remove_publisher_metadata","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","15","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_revision_crossref_checked_ok"," + Crossref should be called to check for updates to the publisher metadata when publishing + a revision that has a DOI. + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test_get_collection_with_dataset_no_metadata"," + GET collection should work when the collection has datasets with no metadata. + This happens when the dataset did not complete ingestion yet. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_remove_dataset_from_published_collection_fail"," + Removing a dataset from a published collection should fail + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters90]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestSetCollectionVersionDatasetsOrder","","","test_set_collection_version_datasets_order_no_custom_order_ok"," + The order of the datasets in a collection version is the default cell count, descending. + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_process_download","","","","test_get_job_definion_name[environ0-dp-test-stack-ingest-process-fake_dataset_id]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","12","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_5","revision_of contains None if the collection is public" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_register_neg","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","15","tests.unit.backend.layers.api","test_curation_api","TestDeleteDataset","","","test__delete_dataset_by_version_id"," + Calling DELETE /collections/:collection_id/datasets/:dataset_id should return a 403 in all cases with auth + credentials, and a 401 without auth credentials + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__current_dataset_version_bad_processing_status","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_change_doi"," + A collection updated with a new DOI should get new publisher metadata from Crossref + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters74]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_unauthorized__403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[23-11]"," + Test the cropping method to ensure the image is cropped to a square + " +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","0","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_check_datasets_no_errors","positive test case for check_datasets method." +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","29","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_public_collection","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","19","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_collection_version_for_tombstoned_collection"," + A tombstoned Collection's versions can only be obtained if the `get_tombstoned` flag is explicitly set to True + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","20","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_cxg","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","26","tests.unit.backend.layers.api","test_curation_api","TestGetDatasetVersion","","","test_get_dataset_version_ok","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_with_auth__OK_4","revision_of contains the id to their published counterpart" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_public_collection_dataset_not_authorized_403","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","21","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_added_dataset_ok"," + Publishing a version with a dataset added should succeed + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_cxg_status_0","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","19","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_retrieves_published_version_by_collection_id_if_revision"," + When there is a revision of a published collection, GET /collections/:collection_id retrieves: + 1. the published version given the canonical collection_id + 2. the revision if given the version_id + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_invalid_collection__403","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","0","tests.unit.backend.common","test_doi","TestDoi","","","test__clean_doi","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","138","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_sparse","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","419","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_all_indexed_dims_single_value__returns_correct_result","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","38","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__copy_if_var_index_name_not_in_columns","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[protocol-google]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","0","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_check_datasets_fail_status","Check datasets when one of the dataset has failed during the ingestion process." +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__crop_to_aspect_ratio[200-150]"," + Test the cropping method to ensure the image is cropped to a square + " +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","7","tests.unit.scripts","test_tombstone","TestTombstone","","","test__tombstone_collection","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-google]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionPostUploadLink","","","test__link_no_auth__401","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_invalid_status_405","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","77","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_private_datasets_200"," + Tests /curation/v1/datasets endpoint with different credentials and visibility filters. + + Test data setup: + - published_collection_1: 2 datasets + - published_collection_2: 1 dataset, other owner + - published_collection_3: 1 dataset, previously revised and published + - unpublished_collection_1: 3 datasets + - unpublished_collection_2: 2 datasets, other owner + - published_collection_1_revision: 3 datasets (one new, one modified) + + " +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails_with_404"," + Asserts a CrossrefFetchException if the GET request fails for any reason + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_doi_not_in_crossref","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__create_collection__InvalidParameters_DOI","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","1","tests.unit.processing","test_dataset_submissions","TestDatasetSubmissions","","","test__missing_curator_file_name__raises_error","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters94]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[raw_data-https://]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","3","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_from_s3_uri"," + Call process download using an s3 uri + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_set_dataset_metadata_ok"," + The dataset metadata can be set using `set_dataset_metadata` + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_collection_published__403","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters25]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollectionsCurators","","","test_view_non_owned_private_collection__ok","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_gather_collections","TestGatherCollections","","","test_with_revision","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","2","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__no_buckets","Check that no files are deleted if buckets are not specified." +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","48","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_from_aws","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters40]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_invalid_collection__403","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_invalid_consortia","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","369","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_multi_valued__returns_correct_result","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_published_collection_fail"," + Adding a dataset to a published collection should result in a failure + " +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","1","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_unescapes_journal_correctly","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__401","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters64]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_assets","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","0","tests.unit.processing","test_handle_error","","","","test_parse_event_with_error_cause","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","44","tests.unit.backend.layers.business","test_business","TestGetDataset","","","test_get_prior_published_dataset_version"," + Given a dataset version id, return the DatasetVersion IF its been part of a published CollectionVersion + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","15","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__sparse_array_only_store_nonzeros_empty_array","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_published_collection_version_for_published_collection_is_none"," + An unpublished collection should not be obtained using get_collection + Instead, `get_collection_version` should be used + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","8","tests.unit.backend.layers.api","test_portal_api","TestCollectionDeletion","","","test_delete_private_collection_version__ok","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters21]","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_calls_crossref_if_api_key_defined","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","2","tests.unit.processing.schema_migration","test_collection_migrate","TestCollectionMigrate","","","test_filter_schema_version","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__file_SERVER_ERROR"," + `get_dataset_asset` should throw 500 if url or file_size aren't returned from the server + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_remove_prefix","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata2-memory_settings2-expected2]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_private_collection__OK","" +"passed","Tue Oct 08 12:54:27 GMT 2024","Tue Oct 08 12:54:29 GMT 2024","2060","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_update_of_existing_secret_updates_secret","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_public_collection_owner__405","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","20","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[no_compare_dim_gene_expressed_in_one_tissue_but_not_other-input_cell_counts_df2-expected_cell_counts_df2-input_gene_expr_df2-expected_gene_expr_df2]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__202","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_update_crossref_metadata_same_doi_returns_none_ok"," + The check for changes in Crossref returns None if there is no change between the existing DOI and the + DOI returned from Crossref. + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","29","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__OK","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","13","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_published_collection_verify_body_is_reshaped_correctly__OK","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","2","tests.unit.processing","test_type_conversion_utils","TestTypeConversionUtils","","","test__get_dtypes_and_schemas_of_dataframe__dtype_and_schema_returns_as_expected","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","2","tests.unit.processing","test_process_download","TestProcessDownload","","","test_download_unknown_uri"," + Call process download using unknown + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_dataset_in_private_collection__ok","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_rejects_two_dois","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters2]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","27","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_a_curators_collections","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters18]","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","26","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id_returns_revision_of_published_collection","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[\x00some data]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters63]","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","5","tests.unit.backend.layers.api","test_app","TestAPI","","","test__api_index__returns_200","If this fails then the server does not work" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses_1","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","10","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_cxg","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","28","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__revision__403"," + Starting a revision on a revision. + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","50","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_matrices_to_cxg_arrays__sparse_array_only_store_nonzeros","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","7","tests.unit.processing","test_rollback","","","","test_rollback_private_collection_list","" +"passed","Tue Oct 08 12:59:18 GMT 2024","Tue Oct 08 12:59:20 GMT 2024","2003","tests.unit.backend.cellguide.pipeline","test_gpt_descriptions","TestGptDescriptionGenerator","","","test__gpt_seo_description_generator","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","12","tests.unit.backend.layers.business","test_business","TestSetPreviousDatasetVersion","","","test_revision_restoring_previously_published_dataset","" +"passed","Tue Oct 08 13:03:01 GMT 2024","Tue Oct 08 13:03:19 GMT 2024","18188","tests.unit.backend.cellguide.pipeline","test_source_collections_generator","TestSourceCollectionsGenerator","","","test__source_collections_generator","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","51","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_incorrect_gene_ids"," + Successfully raises exception for ensembl IDs that do not exist + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters53]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_status__ok","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-://]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_fails"," + Given a canonical collection with a published version and an unpublished version with is_auto_version == True, + creating another unpublished collection version where is_auto_verison is False will fail. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","13","tests.unit.processing","test_rollback","","","","test_rollback_published_collection_list","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__Super_Curator","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_fails_if_collection_not_exists"," + A collection version can only be created on an existing collection + " +"passed","Tue Oct 08 12:54:40 GMT 2024","Tue Oct 08 12:54:40 GMT 2024","1","tests.unit.wmg_processing","test_cube_pipeline","TestCubePipe","","","test_versioned_s3_paths"," + Tests that the path we use for writing the snapshot is the versioned path. + + NOTE: Ideally, we would want this to be a true test of the cube pipeline that actually runs the pipeline, + mocks the S3 upload, and then verifies that the API reads are pulling from the correct mocked S3 files. + This way, we're testing the high-level functionality of the cube pipeline and the API calls directly. + Since our testing infra doesn't currently support S3 mocks well, the past of least resistance is to test + the lower level functions that WMG uses to figure out where to write and read snapshots from. + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_canonical_X","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","25","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__obs_and_var_index_names_specified_doesnt_exist_raises_exception","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","15","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_with_new_dataset__OK"," + Publish a revision with new datasets. + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","3","tests.unit.backend.layers.api","test_curation_api","TestS3Credentials","","","test__generate_s3_credentials__No_Auth","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","116","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_dense","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters45]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_delete_dataset_versions","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","11","tests.unit.processing","test_dataset_metadata_update","TestUpdateMetadataHandler","","","test_update_metadata__missing_rds","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_consortia_ok"," + A collection with consortia can be created using `create_collection` + " +"passed","Tue Oct 08 12:54:25 GMT 2024","Tue Oct 08 12:54:25 GMT 2024","0","tests.unit.scripts","test_zenhub_close","TestFilterIssues","","","test_filter_issues_with_blocking_issues","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_matrix_utils","TestEnforceCanonical","","","test_adata_with_noncanonical_X_and_raw_X","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","23","tests.unit.backend.wmg.api.common","test_rollup","","","","test__rollup[with_ethnicity_compare_dim_on_single_tissue-input_cell_counts_df4-expected_cell_counts_df4-input_gene_expr_df4-expected_gene_expr_df4]"," + Test that the `rollup` function correctly accumulates (or rolls up) gene-expression + values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths + grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ). + + The input: + + 1. A cell type ontology subgraph consisting of 4 cell types. + + CL:0000127 + ├── CL:0000644 + ├── CL:0002605 + └── CL:0002627 + + 2. A gene expression dataframe consisting of expression numeric values for each + (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id. + This value is held in a column called `n_cells_tissue`. + 6. A cell counts dataframe that consists of cell counts for each + (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple. + 7. We set the `n_cells_tissue` column values to 1000 for all rows + in the gene expression dataframe. + 8. We set all other numeric column values to `1` in the gene expression dataframe. + + The expected output: + + 1. A rolled up gene expression dataframe. + 2. A rolled up cell counts dataframe. + 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe + does not change for all rows because it should not be rolled up the cell type ontology + ancestor paths. + 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`) + in the rolled up gene expression dataframe hold the correct rolled up values. + 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct + rolled up values. + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","16","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__can_retrieve_created_collection","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","1","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_api_search_calls"," + In combination with test_api_fetch_calls, checks external API call in search requests (_search_gene_uid) + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters81]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","7","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__consortia__OK","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","147","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_with_updated_metadata_ok"," + Publishing a collection with updated metadata should succeed, but not update revised_at + " +"passed","Tue Oct 08 12:54:34 GMT 2024","Tue Oct 08 12:54:34 GMT 2024","2","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_missing_gene__request_returns_400","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","TestCleanupArtifacts","","","test_cleanup_artifacts__OK[validate]","Check that all artifacts are deleted for the given cases." +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","14","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_data_submission_policy_version__OK"," + Checks data submission policy is correctly saved on publish of a revision. + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","38","tests.unit.backend.layers.api","test_portal_api","TestRevision","","","test__start_revision_of_a_collection__201"," + Start a revision of a collection. + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","10","tests.unit.processing","test_rollback","","","","test_rollback_private_dataset_list","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters77]","" +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","391","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_agg_cell_type_counts__returns_correct_result","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters41]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[doi-https://www.google.com]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollectionPutUploadLink","","","test__dataset_not_in_collection__404"," + Trying to publish a dataset belonging to a different collection raises a 404 + " +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_logger","","","","test_log_suppressed__missed","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[other-https://www.google.com]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","7","tests.unit.backend.layers.business","test_business","TestDeleteDataset","","","test_cleanup_occurs_after_deletion_for_private_collection"," + Updated Dataset assets and rows in private Collection should not be deleted until after Collection is deleted + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__dataset_meta__ok","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","1","tests.unit.processing","test_extract_metadata","TestProcessingValidate","","","test_get_spatial_metadata__is_single_and_fullres_true","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","251","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__filter_request_with_filter_dims__returns_valid_filter_dims","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters66]","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","3","tests.unit.processing","test_dataset_metadata_update","TestValidArtifactStatuses","","","test_has_valid_artifact_statuses__invalid_cxg_status_1","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","20","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_all_collections_for_index"," + The `collections/index` endpoint should only return public collections + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","5","tests.unit.backend.layers.api","test_curation_api","TestPostCollection","","","test__create_collection__InvalidParameters","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","43","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection__ok","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_from_file","" +"passed","Tue Oct 08 12:54:36 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","462","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__filter_request_with_empty_criteria__excludes_comma_delimited_ethnicity_values","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","3","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_add_dataset_artifact_wrong_type_fail"," + Adding a dataset artifact with an unsupported type should fail + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions_not_a_uuid__403","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__remove_collection_consortia","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_curation_api","TestAuthToken","","","test__post_token__401_old_token","The old token fails to authenticate" +"passed","Tue Oct 08 12:54:43 GMT 2024","Tue Oct 08 12:54:49 GMT 2024","5957","tests.unit.backend.wmg","test_query","QueryTest","","","test__query_expression_summary_default_cube__returns_correct_results","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","43","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_value_of_existing_secret_returns_value","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__user_not_collection_owner","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-google.com]","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","20","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__get_title_and_citation_from_doi","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:56:01 GMT 2024","32489","tests.unit.processing","test_handle_error","","","","test_migration_event_does_not_trigger_slack","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","17","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_dataset_published_at_with_replaced_dataset_ok"," + When publishing a collection that contains a replaced dataset, + `published_at` for the replaced dataset should not be updated + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__get_dataset_asset__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestCreateCollection","","","test_create_collection_with_doi_error_ignores_metadata_ok"," + A collection with an invalid DOI will be created with empty publisher metadata + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","82","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_datasets_by_schema_200","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","0","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_check_datasets_not_latest_version","Check datasets when one of the dataset has not been migrated to the latest schema version." +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters86]","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","116","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_with_corpora_and_dense_using_feature_name_var_index","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_handle_error","","","","test_get_failure_slack_notification_message_with_dataset_not_found","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","16","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_nonexistent_collection__4xx","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test_invalid_characters_in_field[\x7ftext]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","23","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_get_collection_versions_for_canonical_ok"," + `get_collection_versions_from_canonical` can be used to retrieve all the versions + for a canonical collection, whether those are published, active or neither + " +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","23","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersionID","","","test_get_collection_version_ok","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__OK[protocol-https://www.google.com]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[doi-google]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters88]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters59]","" +"passed","Tue Oct 08 12:54:36 GMT 2024","Tue Oct 08 12:54:36 GMT 2024","114","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__query_single_primary_dims__returns_200_and_correct_response","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters73]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters14]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters69]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","0","tests.unit.backend.wmg.api.common","test_wmg_api_helpers","","","","test_sanitize_api_query_dict[input_query1-expected_sanitized_query1]","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","11","tests.unit.processing","test_spatial_assets_utils","","","","test__convert_uns_to_cxg_group","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","135","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__with_sparse_column_encoding","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters65]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_collection_triggers_cloudfront_invalidation","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[lab_website-google.com]","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_uri","TestRegisteredSources","","","test_register_pos","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","9","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__can_publish_non_owned_collection_as_super_curator","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters24]","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","2","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_same_doi"," + A collection updated with the same DOI should not trigger a Crossref call + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","5","tests.unit.backend.layers.utils","test_uri","TestS3URI","","","test__validate_with_valid_s3_uri__ok","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","9","tests.unit.backend.layers.api","test_curation_api","TestPatchCollectionID","","","test__update_collection__doi_does_not_exist__BAD_REQUEST","" +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","43","tests.unit.backend.layers.utils","test_secret_config","TestSecretConfig","","","test_when_item_is_in_config_but_not_in_env_and_use_env_is_set_we_use_config","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","3","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_cannot_be_parsed"," + Asserts an CrossrefParseException if the GET request succeeds but cannot be parsed + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","11","tests.unit.backend.layers.api","test_portal_api","TestUpdateCollection","","","test__set_collection_version_datasets_order_get_default_sort__OK","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","14","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_public_collection__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","1","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_add_dataset_to_non_existing_collection_fail"," + Calling `ingest_dataset` on a collection that does not exist should fail + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","43","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionVersions","","","test__get_collection_versions__200","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_pos__do_not_publish_list","Run method when revision is skipped via do_not_publish_list." +"passed","Tue Oct 08 12:54:37 GMT 2024","Tue Oct 08 12:54:37 GMT 2024","363","tests.unit.backend.wmg.api","test_v2","WmgApiV2Tests","","","test__schema4__filter_request_with_nonempty_criteria__excludes_comma_delimited_ethnicity_values","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","11","tests.unit.backend.layers.api","test_curation_api","TestGetCollectionID","","","test__get_tombstoned_collection__410","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_replace_dataset_in_unpublished_collection_ok"," + A dataset can be replaced from a collection version by calling `ingest_dataset` + and specifying an existing dataset_version_id + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_spatial_assets_utils","","","","test__upload_assets_failure"," + Test upload assets to S3 when the upload fails + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters58]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[other-://]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata0-memory_settings0-expected0]","" +"passed","Tue Oct 08 12:55:28 GMT 2024","Tue Oct 08 12:55:28 GMT 2024","135","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__to_cxg__simple_anndata_no_corpora_and_sparse","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","21","tests.unit.backend.layers.business","test_business","TestGetCollectionVersion","","","test_get_unpublished_collection_versions_from_canonical"," + Unpublished Collection versions can be retrieved from a canonical Collection + " +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","20","tests.unit.backend.layers.business","test_business","TestUpdateCollection","","","test_update_collection_change_doi__trigger_dataset_artifact_updates"," + A collection updated with a new DOI and containing datasets should trigger artifact updates to update citation + for each dataset + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","1","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters29]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__update_private_collection_dataset_no_authentication__401","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestDataset","","","test__cancel_dataset_download__user_not_logged_in","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","4","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_normalizes_doi","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_error_wrapper","","","","test_error_wrapper","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_publish_revisions","TestPublishRevisions","","","test_run_neg","Run method when check_datasets returns errors." +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__404","" +"passed","Tue Oct 08 12:54:32 GMT 2024","Tue Oct 08 12:54:32 GMT 2024","2","tests.unit.backend.common","test_crossref_provider","TestCrossrefProvider","","","test__provider_throws_exception_if_request_fails_with_non_2xx_code"," + Asserts a CrossrefFetchException if the GET request return a 500 error (any non 2xx will work) + " +"passed","Tue Oct 08 12:54:19 GMT 2024","Tue Oct 08 12:54:19 GMT 2024","6","tests.unit.backend.layers.api","test_curation_api","TestPatchDataset","","","test_patch_private_collection_dataset_not_authorized_403","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","3","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__delete_key__401","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","2","tests.unit.backend.layers.thirdparty","test_s3_provider","TestS3Provider","","","test__object_deletion","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","7","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__create_collection_strip_string_fields","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters5]","" +"passed","Tue Oct 08 12:55:25 GMT 2024","Tue Oct 08 12:55:25 GMT 2024","1","tests.unit.processing.schema_migration","test_dataset_migrate","TestDatasetMigrate","","","test_dataset_migrate_published","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_info_with_id_and_name"," + Successfully calls NCBIProvider fetch and search functions with both ID and name params + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","29","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__get_collection_id__ok","Verify the test collection exists and the expected fields exist." +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_nonexistent_dataset_4xx","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters30]","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","0","tests.unit.processing","test_matrix_utils","TestMatrixUtils","","","test__is_matrix_sparse__partially_populated_sparse_matrix_returns_true","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","18","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_dataset_published_at_with_new_dataset_ok"," + When publishing a collection that contains a new dataset, `published_at` for the new dataset should be updated + " +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters47]","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","1","tests.unit.backend.layers.common","test_validation","","","","test__link__INVALID[data_source-google]","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","6","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_tombstone_collection_ok"," + A Collection can be tombstoned + " +"passed","Tue Oct 08 12:54:31 GMT 2024","Tue Oct 08 12:54:31 GMT 2024","0","tests.unit.backend.layers.utils","test_semvar_utils","TestSemvarUtils","","","test__prerelease_release_version__returns_true","" +"passed","Tue Oct 08 12:56:32 GMT 2024","Tue Oct 08 12:56:32 GMT 2024","0","tests.unit.processing","test_type_conversion_utils","","","","test_type_inference[parameters27]","" +"passed","Tue Oct 08 12:54:18 GMT 2024","Tue Oct 08 12:54:18 GMT 2024","17","tests.unit.backend.layers.api","test_curation_api","TestGetDatasets","","","test_get_dataset_is_primary_data_shape","" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata3-memory_settings3-expected3]","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","6","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__post_collection_ignores_metadata_if_crossref_exception","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","24","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_dataframe_to_cxg_array__writes_successfully","" +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","15","tests.unit.backend.layers.api","test_curation_api","TestDeleteCollection","","","test__delete_private_collection","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","13","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_create_collection_version_multiple_auto_versions_false_fails"," + Given a canonical collection with a published version and an unpublished version with is_auto_version == False, + creating an unpublished collection version where is_auto_verison is False will fail. + " +"passed","Tue Oct 08 12:54:17 GMT 2024","Tue Oct 08 12:54:17 GMT 2024","10","tests.unit.backend.layers.api","test_curation_api","TestGetCollections","","","test__get_collections_no_auth__OK","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","4","tests.unit.backend.layers.auth","test_auth_keys","TestKeys","","","test__get_key__404","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","5","tests.unit.backend.layers.api","test_portal_api","TestPublishRevision","","","test__publish_revision_as_non_autorized__401"," + Publish a collection as a non authenticated user returns 403 + " +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateDataset","","","test_update_dataset_artifact_metadata_public_collection_error"," + Attemping to update a dataset in a public collection raises an exception. + " +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:21 GMT 2024","2","tests.unit.backend.layers.api","test_portal_api","TestCollection","","","test__list_collection_options__no_allow","" +"passed","Tue Oct 08 12:54:21 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","419","tests.unit.backend.wmg.api.common","test_expression_dotplot","ExpressionDotPlotTest","","","test__query_non_indexed_dim_single_valued__returns_correct_result","" +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","10","tests.unit.processing","test_cxg_generation_utils","TestCxgGenerationUtils","","","test__convert_dictionary_to_cxg_group__writes_successfully","" +"passed","Tue Oct 08 12:54:24 GMT 2024","Tue Oct 08 12:54:24 GMT 2024","0","tests.unit.backend.layers.common","test_validation","","","","test_OK","" +"passed","Tue Oct 08 12:55:27 GMT 2024","Tue Oct 08 12:55:27 GMT 2024","25","tests.unit.processing","test_h5ad_data_file","TestH5ADDataFile","","","test__create_h5ad_data_file__var_index_name_specified_not_unique_raises_exception","" +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","3","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_gene_info_with_id"," + Successfully calls NCBIProvider fetch and search functions with a parameter of only gene ID + " +"passed","Tue Oct 08 12:55:26 GMT 2024","Tue Oct 08 12:55:26 GMT 2024","60","tests.unit.processing","test_dataset_metadata_update","TestDatasetMetadataUpdaterWorker","","","test_update_rds","" +"passed","Tue Oct 08 12:54:26 GMT 2024","Tue Oct 08 12:54:26 GMT 2024","13","tests.unit.backend.layers.utils","test_aws_secret","TestAwsSecret","","","test_delete_of_unknown_secret_raises_exception","" +"passed","Tue Oct 08 12:54:22 GMT 2024","Tue Oct 08 12:54:22 GMT 2024","8","tests.unit.backend.layers.business","test_business","TestUpdateCollectionDatasets","","","test_create_empty_dataset_version_for_current_dataset","" +"passed","Tue Oct 08 12:54:23 GMT 2024","Tue Oct 08 12:54:23 GMT 2024","14","tests.unit.backend.layers.business","test_business","TestCollectionOperations","","","test_publish_version_does_not_change_original_published_at_ok"," + When publishing a collection version, the published_at for the canonical collection + should not change + " +"passed","Tue Oct 08 12:54:20 GMT 2024","Tue Oct 08 12:54:20 GMT 2024","4","tests.unit.backend.layers.api","test_gene_info","GeneInfoAPIv1Tests","","","test_api_double_calls","Checks that, if a gene fails on the first ID search, ncbi_provider will search again (with gene name)" +"passed","Tue Oct 08 12:56:29 GMT 2024","Tue Oct 08 12:56:29 GMT 2024","1","tests.unit.processing","test_process_download","","","","test_estimate_resource_requirements_positive[adata1-memory_settings1-expected1]","" 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18, 19, 20, 21,\n 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32,\n 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43,\n 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,\n 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,\n 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87,\n 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109,\n 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, -128, -127, -126, -125,\n -124, -123, -122, -121, -120, -119, -118, -117, -116, -115, -114,\n -113, -112, -111, -110, -109, -108, -107, -106, -105, -104, -103,\n -102, -101, -100, -99, -98, -97, -96, -95, -94, -93, -92,\n -91, -90, -89, -88, -87, -86, -85, -84, -83, -82, -81,\n -80, -79, -78, -77, -76, -75, -74, -73, -72, -71, -70,\n -69, -68, -67, -66, -65, -64, -63, -62, -61, -60, -59,\n -58, -57, -56, -55, -54, -53, -52, -51, -50, -49, -48,\n -47, -46, -45, -44, -43, -42, -41, -40, -39, -38, -37,\n -36, 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-81, -80, -79, -78, -77, -76, -75, -74, -73,\n -72, -71, -70, -69, -68, -67, -66, -65, -64, -63, -62,\n -61, -60, -59, -58, -57, -56, -55, -54, -53, -52, -51,\n -50, -49, -48, -47, -46, -45, -44, -43, -42, -41, -40,\n -39, -38, -37, -36, -35, -34, -33, -32, -31, -30, -29,\n -28, -27, -26, -25, -24, -23, -22, -21, -20, -19, -18,\n -17, -16, -15, -14, -13, -12, -11, -10, -9, -8, -7,\n -6, -5, -4, -3, -2, -1, 0, 1, 2, 3, 4,\n 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15,\n 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26,\n 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48,\n 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70,\n 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,\n 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,\n 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,\n 126, 127, -128, -127, -126, -125, -124, -123, -122, -121, -120,\n -119, -118, -117, -116, -115, -114, -113, -112, -111, -110, -109,\n -108, -107, -106, -105, -104, -103, -102, -101, -100, -99, -98,\n -97, -96, -95, -94, -93, -92, -91, -90, -89, -88, -87,\n -86, -85, -84, -83, -82, -81, -80, -79, -78, -77, -76,\n -75, -74, -73, -72, -71, -70, -69, -68, -67, -66, -65,\n -64, -63, -62, -61, -60, -59, -58, -57, -56, -55, -54,\n -53, -52, -51, -50, -49, -48, -47, -46, -45, -44, -43,\n -42, -41, -40, -39, -38, -37, -36, -35, -34, -33, -32,\n -31, -30, -29, -28, -27, -26, -25, -24, -23, -22, -21,\n -20, -19, -18, -17, -16, -15, -14, -13, -12, -11, -10,\n -9, -8, -7, -6, -5, -4, -3, -2, -1, 0, 1,\n 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23,\n 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34,\n 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45,\n 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56,\n 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67,\n 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,\n 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100,\n 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122,\n 123, 124, 125, 126, 127, -128, -127, -126, -125, -124, -123,\n -122, -121, -120, -119, -118, -117, -116, -115, -114, -113, -112,\n -111, -110, -109, -108, -107, -106, -105, -104, -103, -102, -101,\n -100, -99, -98, -97, -96, -95, -94, -93, -92, -91, -90,\n -89, -88, -87, -86, -85, -84, -83, -82, -81, -80, -79,\n -78, -77, -76, -75, -74, -73, -72, -71, -70, -69, -68,\n -67, -66, -65, -64, -63, -62, -61, -60, -59, -58, -57,\n -56, -55, -54, -53, -52, -51, -50, -49, -48, -47, -46,\n -45, -44, -43, -42, -41, -40, -39, -38, -37, -36, -35,\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype=int8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters3]","uid":"379caab04c6479b8","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192392,"stop":1728392192392,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ..\n995 -29\n996 -28\n997 -27\n998 -26\n999 -25\nLength: 1000, dtype: int8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters4]","uid":"69639c0f0628fe08","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192395,"stop":1728392192396,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n -34, -33, -32, -31, -30, -29, -28, -27, -26, -25],\n dtype='int8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters5]","uid":"6ed8856500db790d","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192399,"stop":1728392192399,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters6]","uid":"28996fc756fe2545","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192405,"stop":1728392192406,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 0, 1, 2, 3,\n 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16,\n 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29,\n 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42,\n 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,\n 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68,\n 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81,\n 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94,\n 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107,\n 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120,\n 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133,\n 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,\n 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159,\n 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,\n 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185,\n 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198,\n 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,\n 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224,\n 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237,\n 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250,\n 251, 252, 253, 254, 255, 0, 1, 2, 3, 4, 5, 6, 7,\n 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,\n 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33,\n 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46,\n 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59,\n 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,\n 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85,\n 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,\n 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111,\n 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,\n 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137,\n 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150,\n 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163,\n 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176,\n 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189,\n 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,\n 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215,\n 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228,\n 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241,\n 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254,\n 255, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,\n 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24,\n 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,\n 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,\n 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,\n 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76,\n 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89,\n 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,\n 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115,\n 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128,\n 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141,\n 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154,\n 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167,\n 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,\n 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193,\n 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206,\n 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219,\n 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype=uint8), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters7]","uid":"78c3d7171666fedb","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192411,"stop":1728392192411,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 227\n996 228\n997 229\n998 230\n999 231\nLength: 1000, dtype: uint8, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters8]","uid":"2f88276bcd87edbc","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192415,"stop":1728392192415,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 222, 223, 224, 225, 226, 227, 228, 229, 230, 231],\n dtype='uint8', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters9]","uid":"f2317c49393928c9","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192418,"stop":1728392192419,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters10]","uid":"6bceed1cc65e310e","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192424,"stop":1728392192424,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters11]","uid":"106a99eebd7eb867","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192430,"stop":1728392192430,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters12]","uid":"7fb241e9e25b2554","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192434,"stop":1728392192434,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters13]","uid":"b082187bd1e11ff1","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192437,"stop":1728392192437,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters14]","uid":"a21cb7a44ca1498f","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192442,"stop":1728392192443,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters15]","uid":"2c9f208576b28d30","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192449,"stop":1728392192449,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint16, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters16]","uid":"cba302009db36f8d","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192453,"stop":1728392192453,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint16', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters17]","uid":"adc4b721272419aa","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192456,"stop":1728392192456,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters18]","uid":"843f48f8616dbe98","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192462,"stop":1728392192462,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters19]","uid":"de5a1dfa37a80e0c","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192468,"stop":1728392192468,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters20]","uid":"a961625ad1ab9700","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192472,"stop":1728392192472,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters21]","uid":"10358953fa369718","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192475,"stop":1728392192475,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters22]","uid":"4172b71541ae5f27","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192481,"stop":1728392192481,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters23]","uid":"3ffa4db491257821","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192487,"stop":1728392192488,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters24]","uid":"72a908dc2c2546c6","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192491,"stop":1728392192492,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint32', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters25]","uid":"b8f228846032ca59","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192495,"stop":1728392192495,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters26]","uid":"8e415c7d31e993cf","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192500,"stop":1728392192501,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters27]","uid":"c1c7deda814ce757","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192507,"stop":1728392192507,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: int64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters28]","uid":"36a3e3dbf003bfde","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192511,"stop":1728392192511,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='int64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters29]","uid":"5cf447cc8545673c","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192514,"stop":1728392192515,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters30]","uid":"5966bb5ecd61ca7f","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192520,"stop":1728392192520,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=uint64), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters31]","uid":"2c356cf5e045a31f","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192526,"stop":1728392192527,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 1\n2 2\n3 3\n4 4\n ... \n995 995\n996 996\n997 997\n998 998\n999 999\nLength: 1000, dtype: uint64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters32]","uid":"4cb7b85db4a85b36","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192530,"stop":1728392192531,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9,\n ...\n 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype='uint64', length=1000), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters33]","uid":"337ece7380c7f141","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192534,"stop":1728392192534,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters34]","uid":"d00ae1ee664b28a9","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192537,"stop":1728392192538,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-128., -127., -126., ..., 997., 998., 999.], dtype=float32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters35]","uid":"f514034aa2037986","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192542,"stop":1728392192542,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 -128.0\n1 -127.0\n2 -126.0\n3 -125.0\n4 -124.0\n ... \n1123 995.0\n1124 996.0\n1125 997.0\n1126 998.0\n1127 999.0\nLength: 1128, dtype: float32, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters36]","uid":"edd7f3232d9c930d","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192546,"stop":1728392192547,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([-129.0, -128.0, -127.0, -126.0, -125.0, -124.0, -123.0, -122.0, -121.0,\n -120.0,\n ...\n 990.0, 991.0, 992.0, 993.0, 994.0, 995.0, 996.0, 997.0, 998.0,\n 999.0],\n dtype='float32', length=1129), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': None}"],"tags":[]},{"name":"test_type_inference[parameters37]","uid":"498e414a5310b104","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192550,"stop":1728392192551,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ nan, -inf, -1., -0., 0., 0., 1., inf, nan],\n dtype=float32), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': 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999.0\nLength: 1128, dtype: float64, 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters42]","uid":"1e6cb315b191556","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192570,"stop":1728392192571,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([-129.0, -128.0, -127.0, -126.0, -125.0, -124.0, -123.0, -122.0, -121.0,\n -120.0,\n ...\n 990.0, 991.0, 992.0, 993.0, 994.0, 995.0, 996.0, 997.0, 998.0,\n 999.0],\n dtype='float64', length=1129), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters43]","uid":"f52f527d68f927cc","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192575,"stop":1728392192576,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ nan, -inf, -1., -0., 0., 0., 1., inf, nan]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters44]","uid":"2308a2963a554711","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192579,"stop":1728392192580,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-1.79769313e+308, 0.00000000e+000, 1.79769313e+308]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters45]","uid":"9630075c6e69d7f1","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192583,"stop":1728392192584,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': , 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': {'level': 30, 'output': 'may lose precision'}}"],"tags":[]},{"name":"test_type_inference[parameters46]","uid":"b7cda312e950b9a3","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192587,"stop":1728392192587,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([-9223372036854775808, 9223372036854775807]), 'throws': }"],"tags":[]},{"name":"test_type_inference[parameters47]","uid":"70884bf54fbcd04","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192590,"stop":1728392192590,"duration":0},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 18446744073709551615], dtype=uint64), 'throws': }"],"tags":[]},{"name":"test_type_inference[parameters48]","uid":"243226702a458f38","parentUid":"47691ca9566c50180f219303aa12ea3b","status":"passed","time":{"start":1728392192593,"stop":1728392192594,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': array([ 0, 4294967295], dtype=uint32), 'throws': 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\ No newline at end of file diff --git a/22261/data/test-cases/560696bc462b1b0b.json b/22261/data/test-cases/560696bc462b1b0b.json new file mode 100644 index 000000000000..1e82f3472b00 --- /dev/null +++ b/22261/data/test-cases/560696bc462b1b0b.json @@ -0,0 +1 @@ +{"uid":"560696bc462b1b0b","name":"test__rollup[with_ethnicity_compare_dim_on_single_tissue-input_cell_counts_df4-expected_cell_counts_df4-input_gene_expr_df4-expected_gene_expr_df4]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"cea2ec9c99b35378700fac487d392abf","time":{"start":1728392062417,"stop":1728392062440,"duration":23},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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CL:0000127 HANCESTRO:0008 50\n multiethnic 70\n unknown 410\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"},{"name":"expected_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000085265 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000169429 ... 1000\n\n[9 rows x 8 columns]"},{"name":"input_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 unknown 300\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"},{"name":"input_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n\n[5 rows x 8 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n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 HANCESTRO:0008 50\n multiethnic 70\n unknown 410\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n unknown 40"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000085265 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000169429 ... 1000\n\n[9 rows x 8 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id self_reported_ethnicity_ontology_term_id \nUBERON:0000955 CL:0000127 unknown 300\n CL:0000644 unknown 70\n CL:0002605 HANCESTRO:0005 10\n HANCESTRO:0008 30\n multiethnic 40\n CL:0002627 HANCESTRO:0006 10\n HANCESTRO:0008 20\n multiethnic 30\n 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\ No newline at end of file diff --git a/22261/data/test-cases/56b24926b49d8e3e.json b/22261/data/test-cases/56b24926b49d8e3e.json new file mode 100644 index 000000000000..22f91dbe38ce --- /dev/null +++ b/22261/data/test-cases/56b24926b49d8e3e.json @@ -0,0 +1 @@ +{"uid":"56b24926b49d8e3e","name":"test__rollup[no_compare_dim_gene_expressed_in_one_tissue_but_not_other-input_cell_counts_df2-expected_cell_counts_df2-input_gene_expr_df2-expected_gene_expr_df2]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"8829462a338d361e56853010e16ef7d1","time":{"start":1728392062294,"stop":1728392062314,"duration":20},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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columns]"},{"name":"name","value":"'no_compare_dim_gene_expressed_in_one_tissue_but_not_other'"}],"links":[],"hidden":false,"retry":false,"extra":{"severity":"normal","retries":[],"categories":[],"history":{"statistic":{"failed":0,"broken":0,"skipped":0,"passed":259,"unknown":0,"total":259},"items":[{"uid":"de2d5a20fcd13612","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22255//#testresult/de2d5a20fcd13612","status":"passed","time":{"start":1728332252005,"stop":1728332252025,"duration":20}},{"uid":"51ab647a7c3b1a4c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22254//#testresult/51ab647a7c3b1a4c","status":"passed","time":{"start":1728329127266,"stop":1728329127285,"duration":19}},{"uid":"5a61ad7a3c35efe9","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22253//#testresult/5a61ad7a3c35efe9","status":"passed","time":{"start":1728328501532,"stop":1728328501551,"duration":19}},{"uid":"864da4662c5e2d69","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22245//#testresult/864da4662c5e2d69","status":"passed","time":{"start":1728326854016,"stop":1728326854035,"duration":19}},{"uid":"542d59fed820a817","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22244//#testresult/542d59fed820a817","status":"passed","time":{"start":1728326196029,"stop":1728326196048,"duration":19}},{"uid":"6ef01f1b592ce76c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22243//#testresult/6ef01f1b592ce76c","status":"passed","time":{"start":1728325072865,"stop":1728325072900,"duration":35}},{"uid":"1bb1079f02a0f1c7","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22241//#testresult/1bb1079f02a0f1c7","status":"passed","time":{"start":1728322485725,"stop":1728322485745,"duration":20}},{"uid":"f1536a3c0fcc173d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22234//#testresult/f1536a3c0fcc173d","status":"passed","time":{"start":1728321634054,"stop":1728321634074,"duration":20}},{"uid":"7e69279ba5973dad","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22231//#testresult/7e69279ba5973dad","status":"passed","time":{"start":1728320378178,"stop":1728320378197,"duration":19}},{"uid":"b159e67c9e5c879a","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22226//#testresult/b159e67c9e5c879a","status":"passed","time":{"start":1728070928803,"stop":1728070928823,"duration":20}},{"uid":"c9c04f78a15d1328","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22221//#testresult/c9c04f78a15d1328","status":"passed","time":{"start":1728070131776,"stop":1728070131803,"duration":27}},{"uid":"5fbaeb64cd1c91b9","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22222//#testresult/5fbaeb64cd1c91b9","status":"passed","time":{"start":1728070141196,"stop":1728070141222,"duration":26}},{"uid":"e34f3c14ff95ffda","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22220//#testresult/e34f3c14ff95ffda","status":"passed","time":{"start":1728069467732,"stop":1728069467751,"duration":19}},{"uid":"e4df35562f0a33f5","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22212//#testresult/e4df35562f0a33f5","status":"passed","time":{"start":1728061924057,"stop":1728061924076,"duration":19}},{"uid":"baca3b9dfeb9f443","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22211//#testresult/baca3b9dfeb9f443","status":"passed","time":{"start":1728057019010,"stop":1728057019030,"duration":20}},{"uid":"6aca4203e5d2b6fa","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22210//#testresult/6aca4203e5d2b6fa","status":"passed","time":{"start":1728056602352,"stop":1728056602371,"duration":19}},{"uid":"d26a3b71b61392e7","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22198//#testresult/d26a3b71b61392e7","status":"passed","time":{"start":1727977854637,"stop":1727977854656,"duration":19}},{"uid":"756cb6831a5ac512","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22197//#testresult/756cb6831a5ac512","status":"passed","time":{"start":1727975545711,"stop":1727975545731,"duration":20}},{"uid":"2d1e8df6d3fe882d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22196//#testresult/2d1e8df6d3fe882d","status":"passed","time":{"start":1727975478861,"stop":1727975478880,"duration":19}},{"uid":"f9834a76ea62473e","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22182//#testresult/f9834a76ea62473e","status":"passed","time":{"start":1727969551345,"stop":1727969551366,"duration":21}}]},"tags":[]},"source":"56b24926b49d8e3e.json","parameterValues":[" 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ingle-cell-data-portal/22210//#testresult/f12afa13fb000249","status":"passed","time":{"start":1728056621180,"stop":1728056621184,"duration":4}},{"uid":"29329402ad3ded4a","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22198//#testresult/29329402ad3ded4a","status":"passed","time":{"start":1727977852249,"stop":1727977852253,"duration":4}},{"uid":"f85666725a851cc1","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22197//#testresult/f85666725a851cc1","status":"passed","time":{"start":1727975542239,"stop":1727975542242,"duration":3}},{"uid":"b5fad52168acde7d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22196//#testresult/b5fad52168acde7d","status":"passed","time":{"start":1727975476089,"stop":1727975476093,"duration":4}},{"uid":"4840513f580587ec","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22182//#testresult/4840513f580587ec","status":"passed","time":{"start":1727969571954,"stop":1727969571957,"duration":3}}]},"tags":[]},"source":"9e8658133b4d2142.json","parameterValues":[]} \ No newline at end of file diff --git a/22261/data/test-cases/9ece53f1083abe24.json b/22261/data/test-cases/9ece53f1083abe24.json new file mode 100644 index 000000000000..a36493ebb021 --- /dev/null +++ b/22261/data/test-cases/9ece53f1083abe24.json @@ -0,0 +1 @@ +{"uid":"9ece53f1083abe24","name":"test__rollup[no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others-input_cell_counts_df1-expected_cell_counts_df1-input_gene_expr_df1-expected_gene_expr_df1]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"4f34d24473a3e97e04a717c5f4435ddc","time":{"start":1728392062234,"stop":1728392062253,"duration":19},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"expected_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000169429 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000085265 ... 1000\n9 ENSG00000169429 ... 1000\n\n[10 rows x 7 columns]"},{"name":"input_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"input_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000169429 ... 1000\n\n[6 rows x 7 columns]"},{"name":"name","value":"'no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others'"}],"links":[],"hidden":false,"retry":false,"extra":{"severity":"normal","retries":[],"categories":[],"history":{"statistic":{"failed":0,"broken":0,"skipped":0,"passed":259,"unknown":0,"total":259},"items":[{"uid":"b397d6b92ba27c9d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22255//#testresult/b397d6b92ba27c9d","status":"passed","time":{"start":1728332251944,"stop":1728332251964,"duration":20}},{"uid":"48859c88e4c4be1c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22254//#testresult/48859c88e4c4be1c","status":"passed","time":{"start":1728329127201,"stop":1728329127223,"duration":22}},{"uid":"92e30e011b4b48db","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22253//#testresult/92e30e011b4b48db","status":"passed","time":{"start":1728328501472,"stop":1728328501491,"duration":19}},{"uid":"8be293269f8fc413","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22245//#testresult/8be293269f8fc413","status":"passed","time":{"start":1728326853954,"stop":1728326853974,"duration":20}},{"uid":"dfcc747dc3b0b3a7","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22244//#testresult/dfcc747dc3b0b3a7","status":"passed","time":{"start":1728326195969,"stop":1728326195988,"duration":19}},{"uid":"df95641ea7a6c75c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22243//#testresult/df95641ea7a6c75c","status":"passed","time":{"start":1728325072784,"stop":1728325072806,"duration":22}},{"uid":"eeb7762a10211e14","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22241//#testresult/eeb7762a10211e14","status":"passed","time":{"start":1728322485659,"stop":1728322485682,"duration":23}},{"uid":"316f6c92708a4f13","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22234//#testresult/316f6c92708a4f13","status":"passed","time":{"start":1728321633993,"stop":1728321634012,"duration":19}},{"uid":"cfe09194b6ad94bf","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22231//#testresult/cfe09194b6ad94bf","status":"passed","time":{"start":1728320378117,"stop":1728320378136,"duration":19}},{"uid":"20761753d8f979ab","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22226//#testresult/20761753d8f979ab","status":"passed","time":{"start":1728070928740,"stop":1728070928760,"duration":20}},{"uid":"a25e95b26da1bbeb","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22221//#testresult/a25e95b26da1bbeb","status":"passed","time":{"start":1728070131696,"stop":1728070131720,"duration":24}},{"uid":"e9d4f1021e670e2c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22222//#testresult/e9d4f1021e670e2c","status":"passed","time":{"start":1728070141105,"stop":1728070141135,"duration":30}},{"uid":"98996eb5bf4711fd","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22220//#testresult/98996eb5bf4711fd","status":"passed","time":{"start":1728069467673,"stop":1728069467692,"duration":19}},{"uid":"5bb5c14d1f6e084a","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22212//#testresult/5bb5c14d1f6e084a","status":"passed","time":{"start":1728061923996,"stop":1728061924016,"duration":20}},{"uid":"9d84a5124fa9e5e5","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22211//#testresult/9d84a5124fa9e5e5","status":"passed","time":{"start":1728057018947,"stop":1728057018967,"duration":20}},{"uid":"2295df0d2b03beeb","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22210//#testresult/2295df0d2b03beeb","status":"passed","time":{"start":1728056602292,"stop":1728056602311,"duration":19}},{"uid":"de6f790734ecdbb8","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22198//#testresult/de6f790734ecdbb8","status":"passed","time":{"start":1727977854575,"stop":1727977854595,"duration":20}},{"uid":"bb0291e099e6506b","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22197//#testresult/bb0291e099e6506b","status":"passed","time":{"start":1727975545649,"stop":1727975545669,"duration":20}},{"uid":"5d634ae0a8c5034f","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22196//#testresult/5d634ae0a8c5034f","status":"passed","time":{"start":1727975478800,"stop":1727975478820,"duration":20}},{"uid":"6224de69cb8457dd","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22182//#testresult/6224de69cb8457dd","status":"passed","time":{"start":1727969551281,"stop":1727969551302,"duration":21}}]},"tags":[]},"source":"9ece53f1083abe24.json","parameterValues":[" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 240\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n5 ENSG00000085265 ... 1000\n6 ENSG00000169429 ... 1000\n7 ENSG00000085265 ... 1000\n8 ENSG00000085265 ... 1000\n9 ENSG00000169429 ... 1000\n\n[10 rows x 7 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000085265 ... 1000\n5 ENSG00000169429 ... 1000\n\n[6 rows x 7 columns]","'no_compare_dim_one_ancestor_cell_type_missing_in_one_tissue_but_exists_in_all_others'"]} \ No newline at end of file diff --git a/22261/data/test-cases/9ed6267c596b3da2.json b/22261/data/test-cases/9ed6267c596b3da2.json new file mode 100644 index 000000000000..e7ebae87df91 --- /dev/null +++ b/22261/data/test-cases/9ed6267c596b3da2.json @@ -0,0 +1 @@ +{"uid":"9ed6267c596b3da2","name":"test__can_reupload_dataset_as_super_curator","fullName":"tests.unit.backend.layers.api.test_portal_api.TestCollectionUploadLinkCurators#test__can_reupload_dataset_as_super_curator","historyId":"57a50644b4985f61dc8c69f723d513b4","time":{"start":1728392062259,"stop":1728392062267,"duration":8},"description":"\n A super curator can reupload a dataset to a non-owned collection\n ","descriptionHtml":"
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A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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\ No newline at end of file diff --git a/22261/data/test-cases/ef35a7b4213bad46.json b/22261/data/test-cases/ef35a7b4213bad46.json new file mode 100644 index 000000000000..182ef7400c9c --- /dev/null +++ b/22261/data/test-cases/ef35a7b4213bad46.json @@ -0,0 +1 @@ +{"uid":"ef35a7b4213bad46","name":"test__rollup[no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all-input_cell_counts_df3-expected_cell_counts_df3-input_gene_expr_df3-expected_gene_expr_df3]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"31b9ca75c80d7f71de070fae47c3e8e4","time":{"start":1728392062354,"stop":1728392062374,"duration":20},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
\n","status":"passed","flaky":false,"newFailed":false,"newBroken":false,"newPassed":false,"retriesCount":0,"retriesStatusChange":false,"beforeStages":[{"name":"patch_all","time":{"start":1728392059408,"stop":1728392059408,"duration":0},"status":"passed","steps":[],"attachments":[],"parameters":[],"shouldDisplayMessage":false,"stepsCount":0,"attachmentsCount":0,"hasContent":false,"attachmentStep":false}],"testStage":{"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","status":"passed","steps":[],"attachments":[{"uid":"be3c046a84887ac9","name":"log","source":"be3c046a84887ac9.txt","type":"text/plain","size":230},{"uid":"fc344cb63de4e299","name":"stderr","source":"fc344cb63de4e299.txt","type":"text/plain","size":704}],"parameters":[],"shouldDisplayMessage":false,"stepsCount":0,"attachmentsCount":2,"hasContent":true,"attachmentStep":false},"afterStages":[],"labels":[{"name":"parentSuite","value":"tests.unit.backend.wmg.api.common"},{"name":"suite","value":"test_rollup"},{"name":"host","value":"383a979da6b6"},{"name":"thread","value":"1-MainThread"},{"name":"framework","value":"pytest"},{"name":"language","value":"cpython3"},{"name":"package","value":"tests.unit.backend.wmg.api.common.test_rollup"},{"name":"resultFormat","value":"allure2"}],"parameters":[{"name":"expected_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"expected_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n\n[5 rows x 7 columns]"},{"name":"input_cell_counts_df","value":" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"},{"name":"input_gene_expr_df","value":" gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n\n[3 rows x 7 columns]"},{"name":"name","value":"'no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all'"}],"links":[],"hidden":false,"retry":false,"extra":{"severity":"normal","retries":[],"categories":[],"history":{"statistic":{"failed":0,"broken":0,"skipped":0,"passed":259,"unknown":0,"total":259},"items":[{"uid":"f991f00a33652de8","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22255//#testresult/f991f00a33652de8","status":"passed","time":{"start":1728332252065,"stop":1728332252084,"duration":19}},{"uid":"b40f10a3f04b1d5e","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22254//#testresult/b40f10a3f04b1d5e","status":"passed","time":{"start":1728329127326,"stop":1728329127345,"duration":19}},{"uid":"f0d018d96a284f91","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22253//#testresult/f0d018d96a284f91","status":"passed","time":{"start":1728328501590,"stop":1728328501609,"duration":19}},{"uid":"ed6a8cfbc2faeaa8","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22245//#testresult/ed6a8cfbc2faeaa8","status":"passed","time":{"start":1728326854075,"stop":1728326854094,"duration":19}},{"uid":"2cb9778855d49ed6","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22244//#testresult/2cb9778855d49ed6","status":"passed","time":{"start":1728326196089,"stop":1728326196109,"duration":20}},{"uid":"a4d5d550c5897dd5","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22243//#testresult/a4d5d550c5897dd5","status":"passed","time":{"start":1728325072957,"stop":1728325072991,"duration":34}},{"uid":"183de4b904bf72f9","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22241//#testresult/183de4b904bf72f9","status":"passed","time":{"start":1728322485786,"stop":1728322485805,"duration":19}},{"uid":"c0e1a470f9b56fa6","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22234//#testresult/c0e1a470f9b56fa6","status":"passed","time":{"start":1728321634115,"stop":1728321634135,"duration":20}},{"uid":"569aad3d72f07a7d","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22231//#testresult/569aad3d72f07a7d","status":"passed","time":{"start":1728320378236,"stop":1728320378255,"duration":19}},{"uid":"aec393cbfd65e037","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22226//#testresult/aec393cbfd65e037","status":"passed","time":{"start":1728070928864,"stop":1728070928883,"duration":19}},{"uid":"984a50eddd005db1","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22221//#testresult/984a50eddd005db1","status":"passed","time":{"start":1728070131870,"stop":1728070131903,"duration":33}},{"uid":"c217b169e68cca0a","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22222//#testresult/c217b169e68cca0a","status":"passed","time":{"start":1728070141283,"stop":1728070141315,"duration":32}},{"uid":"6daf165ab64a8dcf","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22220//#testresult/6daf165ab64a8dcf","status":"passed","time":{"start":1728069467790,"stop":1728069467808,"duration":18}},{"uid":"86ff0eb189298090","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22212//#testresult/86ff0eb189298090","status":"passed","time":{"start":1728061924116,"stop":1728061924136,"duration":20}},{"uid":"baa67cdf314976c7","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22211//#testresult/baa67cdf314976c7","status":"passed","time":{"start":1728057019074,"stop":1728057019094,"duration":20}},{"uid":"e6cd18e553ced86f","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22210//#testresult/e6cd18e553ced86f","status":"passed","time":{"start":1728056602410,"stop":1728056602429,"duration":19}},{"uid":"2709159215dc85c","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22198//#testresult/2709159215dc85c","status":"passed","time":{"start":1727977854697,"stop":1727977854716,"duration":19}},{"uid":"d78e8fcc1912f83","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22197//#testresult/d78e8fcc1912f83","status":"passed","time":{"start":1727975545771,"stop":1727975545791,"duration":20}},{"uid":"d3673935da920301","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22196//#testresult/d3673935da920301","status":"passed","time":{"start":1727975478920,"stop":1727975478939,"duration":19}},{"uid":"1f588f8abec37412","reportUrl":"https://chanzuckerberg.github.io/single-cell-data-portal/22182//#testresult/1f588f8abec37412","status":"passed","time":{"start":1727969551408,"stop":1727969551429,"duration":21}}]},"tags":[]},"source":"ef35a7b4213bad46.json","parameterValues":[" n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 540\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000169429 ... 1000\n2 ENSG00000085265 ... 1000\n3 ENSG00000085265 ... 1000\n4 ENSG00000169429 ... 1000\n\n[5 rows x 7 columns]"," n_cells_cell_type\ntissue_ontology_term_id cell_type_ontology_term_id \nUBERON:0000955 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90\nUBERON:0002113 CL:0000127 300\n CL:0000644 70\n CL:0002605 80\n CL:0002627 90"," gene_ontology_term_id ... n_cells_tissue\n0 ENSG00000085265 ... 1000\n1 ENSG00000085265 ... 1000\n2 ENSG00000169429 ... 1000\n\n[3 rows x 7 columns]","'no_compare_dim_one_of_the_tissues_has_no_gene_expressions_at_all'"]} \ No newline at end of file diff --git a/22261/data/test-cases/ef6419eb3491c9f9.json 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\ No newline at end of file diff --git a/22261/data/test-cases/f4bc0d0c1102054f.json b/22261/data/test-cases/f4bc0d0c1102054f.json new file mode 100644 index 000000000000..6600f7ddca48 --- /dev/null +++ b/22261/data/test-cases/f4bc0d0c1102054f.json @@ -0,0 +1 @@ +{"uid":"f4bc0d0c1102054f","name":"test__rollup[no_compare_dim_all_tissues_have_all_cell_types-input_cell_counts_df0-expected_cell_counts_df0-input_gene_expr_df0-expected_gene_expr_df0]","fullName":"tests.unit.backend.wmg.api.common.test_rollup#test__rollup","historyId":"f8f8ae804e63395ddf252e5ce0694c9b","time":{"start":1728392062153,"stop":1728392062193,"duration":40},"description":"\n Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\n values FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\n grouped by (tissue_ontology_term_id, cell_type_ontology_term_id, ).\n\n The input:\n\n 1. A cell type ontology subgraph consisting of 4 cell types.\n\n CL:0000127\n ├── CL:0000644\n ├── CL:0002605\n └── CL:0002627\n\n 2. A gene expression dataframe consisting of expression numeric values for each\n (gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\n This value is held in a column called `n_cells_tissue`.\n 6. A cell counts dataframe that consists of cell counts for each\n (tissue_ontology_term_id, cell_type_ontology_term_id, ) tuple.\n 7. We set the `n_cells_tissue` column values to 1000 for all rows\n in the gene expression dataframe.\n 8. We set all other numeric column values to `1` in the gene expression dataframe.\n\n The expected output:\n\n 1. A rolled up gene expression dataframe.\n 2. A rolled up cell counts dataframe.\n 3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\n does not change for all rows because it should not be rolled up the cell type ontology\n ancestor paths.\n 4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\n in the rolled up gene expression dataframe hold the correct rolled up values.\n 5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\n rolled up values.\n ","descriptionHtml":"
Test that the `rollup` function correctly accumulates (or rolls up) gene-expression\nvalues FOR EACH expressed gene and cell count values up the cell type ANCESTOR paths\ngrouped by (tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>).\n\nThe input:\n\n1. A cell type ontology subgraph consisting of 4 cell types.\n\nCL:0000127\n├── CL:0000644\n├── CL:0002605\n└── CL:0002627\n\n2. A gene expression dataframe consisting of expression numeric values for each\n(gene_ontology_term_id, tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n3. The gene expression dataframe also holds total cell counts per tissue_ontology_term_id.\nThis value is held in a column called `n_cells_tissue`.\n6. A cell counts dataframe that consists of cell counts for each\n(tissue_ontology_term_id, cell_type_ontology_term_id, <compare_dimension>) tuple.\n7. We set the `n_cells_tissue` column values to 1000 for all rows\nin the gene expression dataframe.\n8. We set all other numeric column values to `1` in the gene expression dataframe.\n\nThe expected output:\n\n1. A rolled up gene expression dataframe.\n2. A rolled up cell counts dataframe.\n3. Assert that `n_cells_tissue` column value in the rolled up gene expression dataframe\ndoes not change for all rows because it should not be rolled up the cell type ontology\nancestor paths.\n4. Assert that other numeric column values (i.e the columns that are not `n_cells_tissue`)\nin the rolled up gene expression dataframe hold the correct rolled up values.\n5. Assert that the cell counts in the rolled up cell counts dataframe hold the correct\nrolled up values.\n
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796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999]), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters94]","uid":"654a4b5e555a4134","parentUid":"9919ace88299ea2829fa9cd5671ee44d","status":"passed","time":{"start":1728392192805,"stop":1728392192806,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': [0, 4294967295]\nCategories (2, uint32): [0, 4294967295], 'throws': }"],"tags":[]},{"name":"test_type_inference[parameters86]","uid":"faf2ef6ec609da80","parentUid":"9919ace88299ea2829fa9cd5671ee44d","status":"passed","time":{"start":1728392192767,"stop":1728392192768,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': 0 0\n1 NaN\n2 2\ndtype: category\nCategories (2, uint64): [0, 2], 'expected_encoding_dtype': , 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array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,\n 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25,\n 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,\n 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51,\n 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64,\n 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,\n 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90,\n 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103,\n 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,\n 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,\n 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142,\n 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155,\n 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168,\n 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181,\n 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,\n 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207,\n 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220,\n 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233,\n 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246,\n 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259,\n 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272,\n 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285,\n 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298,\n 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,\n 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324,\n 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337,\n 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350,\n 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363,\n 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376,\n 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389,\n 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402,\n 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415,\n 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428,\n 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441,\n 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454,\n 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467,\n 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480,\n 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493,\n 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506,\n 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519,\n 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532,\n 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545,\n 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558,\n 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,\n 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584,\n 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597,\n 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610,\n 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623,\n 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636,\n 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649,\n 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662,\n 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675,\n 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688,\n 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701,\n 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714,\n 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727,\n 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740,\n 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753,\n 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766,\n 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779,\n 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792,\n 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805,\n 806, 807, 808, 809, 810, 811, 812, 813, 814, 815, 816, 817, 818,\n 819, 820, 821, 822, 823, 824, 825, 826, 827, 828, 829, 830, 831,\n 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844,\n 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857,\n 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870,\n 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883,\n 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896,\n 897, 898, 899, 900, 901, 902, 903, 904, 905, 906, 907, 908, 909,\n 910, 911, 912, 913, 914, 915, 916, 917, 918, 919, 920, 921, 922,\n 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935,\n 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948,\n 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961,\n 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974,\n 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987,\n 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999],\n dtype=int16), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'int32'}}"],"tags":[]},{"name":"test_type_inference[parameters36]","uid":"edd7f3232d9c930d","parentUid":"9919ace88299ea2829fa9cd5671ee44d","status":"passed","time":{"start":1728392192546,"stop":1728392192547,"duration":1},"flaky":false,"newFailed":false,"newPassed":false,"newBroken":false,"retriesCount":0,"retriesStatusChange":false,"parameters":["{'data': Index([-129.0, -128.0, -127.0, -126.0, -125.0, -124.0, -123.0, -122.0, -121.0,\n -120.0,\n ...\n 990.0, 991.0, 992.0, 993.0, 994.0, 995.0, 996.0, 997.0, 998.0,\n 999.0],\n dtype='float32', length=1129), 'expected_encoding_dtype': , 'expected_schema_hint': {'type': 'float32'}, 'logs': 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