From 1809d78b3b6e400cb5c482a148e7474c1110835e Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Fri, 30 Jun 2023 12:14:42 +0200 Subject: [PATCH] Designate GD.3 (S:F59L, Russia) with 80 seqs --- lineage_notes.txt | 1 + lineages.csv | 93 +++++++++++++++++++++++++++++++++++++++++++++-- 2 files changed, 91 insertions(+), 3 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 1400e81e..9233b7e9 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2855,6 +2855,7 @@ EG.7 Alias of XBB.1.9.2.7, S:R403K, S:L513F, ORF1a:N2531S, Germany/England XBB.1.9.3 ORF1b:G2005S, ORF1b:G1568C, Europe, from https://github.com/jmcbroome/auto-pango-designation/pull/193 GD.1 Alias of XBB.1.9.3.1, S:Y453F, Mexico/USA, from #1897 GD.2 Alias of XBB.1.9.3.2, S:L212S, Philippines +GD.3 Alias of XBB.1.9.3.3, S:F59L, Russia XBB.1.9.4 28603T, Europe XBB.1.9.5 ORF1a:D629E, Russia XBB.1.9.6 S:403K, S:570T, Indonesia diff --git a/lineages.csv b/lineages.csv index a7b41c6e..7227ec71 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2203946,9 +2203946,6 @@ England/PLYM-326BA367/2023,XBB.1.9.3 Indonesia/SS-NIHRD-W00121/2022,XBB.1.9.3 Sweden/SUS0020626/2023,XBB.1.9.3 Sweden/SUS0020464/2023,XBB.1.9.3 -Israel/SMC-7112156/2023,XBB.1.9.3 -Russia/SPE-RII-9271S/2023,XBB.1.9.3 -India/DL-ILBS7439/2023,XBB.1.9.3 France/NAQ-HCL723000187301/2023,XBB.1.9.3 Russia/SPE-RII-9286S/2023,XBB.1.9.3 Russia/MOW-RII-MH126294S/2022,XBB.1.9.3 @@ -2430928,3 +2430925,93 @@ Philippines/PH-PGCMIN2601/2023,GD.2 Philippines/PH-PGCMIN2682/2023,GD.2 Philippines/PH-VUI-147969/2023,GD.2 Philippines/PH-VUI-147864/2023,GD.2 +Russia/MOW-RII-MH129167S/2023,GD.3 +Russia/MO-RII-MH135737S/2023,GD.3 +Russia/MOW-RII-MH135489S/2023,GD.3 +Thailand/NIC_LEI_725/2023,GD.3 +Russia/SPE-RII-14771S/2023,GD.3 +Russia/MO-RII-MH131407S/2023,GD.3 +Russia/MOW-RII-MH127887S/2023,GD.3 +Russia/MOW-RII-MH128206S/2023,GD.3 +Russia/SPE-RII-14332S/2023,GD.3 +India/GJ-INSACOG-GBRC10249/2023,GD.3 +Russia/MOW-RII-MH127897S/2023,GD.3 +Russia/MOW-PMVL-OM0223O151/2023,GD.3 +Russia/MOW-RII-MH130073S/2023,GD.3 +Russia/MOW-RII-MH129182S/2023,GD.3 +Russia/MOW-RII-MH127566S/2023,GD.3 +Israel/ICH-741196264/2023,GD.3 +Russia/MOW-RII-MH127905S/2023,GD.3 +Russia/MOW-RII-MH129032S/2023,GD.3 +Russia/MOW-RII-MH129149S/2023,GD.3 +Russia/MOW-RII-MH127589S/2023,GD.3 +Russia/MOW-PMVL-OM0223O196/2023,GD.3 +Russia/MOW-RII-MH127809S/2023,GD.3 +Russia/MOW-RII-MH127615S/2023,GD.3 +Russia/MOW-RII-MH128293S/2023,GD.3 +Russia/MOW-RII-MH129336S/2023,GD.3 +Russia/MOS-RII-MH129211S/2023,GD.3 +Russia/SPE-RII-11443S/2023,GD.3 +Russia/SPE-RII-12267S/2023,GD.3 +Russia/SPE-RII-11222S/2023,GD.3 +Russia/MO-RII-MH131452S/2023,GD.3 +Russia/TYU-RII-MH130650S/2023,GD.3 +Russia/KDA-RII-MH136887S/2023,GD.3 +Russia/MOW-RII-MH133169S/2023,GD.3 +Russia/MOW-RII-MH128456S/2022,GD.3 +Russia/MO-RII-MH128654S/2023,GD.3 +India/DL-ILBS7439/2023,GD.3 +Russia/MOW-PMVL-OM0223559/2023,GD.3 +Russia/MOW-RII-MH138721S/2023,GD.3 +Israel/SMC-7112156/2023,GD.3 +Russia/MO-RII-MH135562S/2023,GD.3 +Russia/MO-RII-MH135559S/2023,GD.3 +Russia/MO-RII-MH131432S/2023,GD.3 +Georgia/NCDC-Tb-sNGS7376/2023,GD.3 +Georgia/Tb-sNGS7272/2023,GD.3 +Russia/MOW-RII-MH133229S/2023,GD.3 +Russia/MOS-RII-MH129073S/2023,GD.3 +Russia/MOW-RII-MH130281S/2023,GD.3 +Russia/MOW-RII-MH129321S/2023,GD.3 +Russia/MO-RII-MH135674S/2023,GD.3 +Russia/MO-RII-MH131326S/2023,GD.3 +Russia/YAR-RII-MH132030S/2023,GD.3 +Russia/YAR-RII-MH131843S/2023,GD.3 +SouthKorea/KDCA235622/2023,GD.3 +Russia/YAR-RII-MH131918S/2023,GD.3 +Russia/BRY-RII-MH135817S/2023,GD.3 +Russia/MO-RII-MH135765S/2023,GD.3 +Russia/MOW-RSMU-UQJ733/2023,GD.3 +Russia/MOW-RSMU-OCE990/2023,GD.3 +Russia/YAN-RII-MH131048S/2023,GD.3 +Russia/YAN-RII-MH131047S/2023,GD.3 +Russia/MOW-RII-MH130114S/2023,GD.3 +Russia/SPE-RII-9271S/2023,GD.3 +Russia/MOS-RII-MH135509S/2023,GD.3 +Russia/YAR-RII-MH131998S/2023,GD.3 +Russia/MOW-RII-MH129169S/2023,GD.3 +Russia/SVE-RII-MH130205S/2023,GD.3 +Russia/SVE-RII-MH130227S/2023,GD.3 +Russia/SVE-RII-MH128957S/2023,GD.3 +Russia/MOW-RII-MH129235S/2023,GD.3 +Russia/MOW-PMVL-OM0223O340/2023,GD.3 +Russia/MOW-PMVL-OM0223O158/2023,GD.3 +Russia/MOW-PMVL-OM0223O300/2023,GD.3 +Russia/MOW-PMVL-OM0223O184/2023,GD.3 +Russia/MAG-RII-MH138438S/2023,GD.3 +Israel/CVL-8014357/2023,GD.3 +Russia/YAR-RII-MH131810S/2023,GD.3 +Russia/YAR-RII-MH131703S/2023,GD.3 +Russia/YAR-RII-MH131650S/2023,GD.3 +Russia/YAR-RII-MH131738S/2023,GD.3 +Russia/YAR-RII-MH131926S/2023,GD.3 +Russia/YAR-RII-MH131868S/2023,GD.3 +Russia/YAR-RII-MH131910S/2023,GD.3 +Russia/SPE-RII-12424S/2023,GD.3 +Russia/SPE-RII-11644S/2023,GD.3 +Russia/SPE-RII-MH135529S/2023,GD.3 +Russia/SPE-RII-14888S/2023,GD.3 +Russia/SPE-RII-14231S/2023,GD.3 +Russia/SPE-RII-11675S/2023,GD.3 +Russia/SPE-RII-13293S/2023,GD.3 +Russia/SPE-RII-13089S/2023,GD.3