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As Jn.1.7.8 there are many lineages carrying a large deletion around 185-189, most of them died off or currently dying, but this LB.1.7 went on circulating , maybe just luck to be in NY but better to track it here
As Jn.1.7.8 there are many lineages carrying a large deletion around 185-189, most of them died off or currently dying, but this LB.1.7 went on circulating , maybe just luck to be in NY but better to track it here
From Branch 6 of sars-cov-2-variants/lineage-proposals#1798
LB.1.7>> S:186-189del (del22115_22129)
Query: C4784T,del22115,G21123T
Samples: 39
Places: 2 (US mainly NY 17/39 and Canada)
Tree ( samples are scattered due Usher not reading deletions:
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_50be9_e4e5a0.json?f_userOrOld=uploaded%20sample&label=id:node_7335389
IDs:
EPI_ISL_19221954, EPI_ISL_19240623, EPI_ISL_19240673,
EPI_ISL_19255261, EPI_ISL_19277691, EPI_ISL_19282806,
EPI_ISL_19289160, EPI_ISL_19298262, EPI_ISL_19298401,
EPI_ISL_19316908, EPI_ISL_19317205, EPI_ISL_19317303,
EPI_ISL_19329084, EPI_ISL_19335163, EPI_ISL_19344170,
EPI_ISL_19344304, EPI_ISL_19346298, EPI_ISL_19347271,
EPI_ISL_19364489, EPI_ISL_19376103, EPI_ISL_19376196,
EPI_ISL_19377398, EPI_ISL_19386546, EPI_ISL_19392305,
EPI_ISL_19394915, EPI_ISL_19416024, EPI_ISL_19416318,
EPI_ISL_19419779, EPI_ISL_19419817, EPI_ISL_19422610,
EPI_ISL_19423361, EPI_ISL_19428053, EPI_ISL_19428369,
EPI_ISL_19437823, EPI_ISL_19439945-19439946, EPI_ISL_19452648,
EPI_ISL_19452847, EPI_ISL_19455471
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