pango-designation v1.2.41

• Added 5 new lineages P.1 sublineages from #141: P.1.3 (25 new sequence designations), P.1.4 (93 new sequence designations), P.1.5 (8 new sequence designations), P.1.6 (85 new sequence designations) and P.1.7 (272 new sequence designations)
• Added 5 new sequence designations based on #133

pango-designation v1.2.40

• Added new lineage C.1.2 from #139 with 15 new sequence designations
• Added 118 new AT.1 sequence designations based on #152
• Removed 6 AY.1 sequence designations - 5 that potentially acquired K417N independently and 1 that does not have K417N

pango-designation v1.2.39

• Removed sequence USA/TX-HMH-MCoV-19489/2020 from lineages.csv based on discussion in #127
• Added new sequence designations USA/TX-HMH-MCoV-24409/2021 (B.1) and USA/TX-CDC-LC0064671/2021 (A.2.5.2) based on discussion in #127

pango-designation v1.2.38

• Withdrew lineage B.1.351.4 with removal of 17 sequence designations based on discussion in #134

pango-designation v1.2.37

• Added new lineage B.1.630 from #137 containing 28 new sequence designations

pango-designation v1.2.36

• Added new lineage B.1.351.4 from #134 with 17 new sequence designations
• Added new lineage A.30 from #138 with 5 new sequence designations

pango-designation v1.2.35

• Added 187 new AY.1 sequence designations. There are now 249 sequences designated AY.1

pango-designation v1.2.34

Updated sequence designations for AY.2 and AY.3 to include all sequences in these clades with <5% ambiguity as of 7th July 2021

• Added 82 new AY.2 sequence designations
• Added 130 new AY.3 sequence designations and updated 35 sequence designations from B.1.617.2 to AY.3. The 35 sequences with updated designations are in:
  updated_AY.3_designations.txt

The number of sequence designations in this part of the tree is now:
B.1.617.2 - 55,425 sequences
AY.1 - 62 sequences
AY.2 - 201 sequences
AY.3 - 275 sequences

pango-designation v1.2.33

• Added 55,286 new B.1.617.2 sequence designations to lineages.csv. These are all of the sequences assigned to B.1.617.2 on GISAID as of 05/07/2021 that have all 13 SNPs in the B.1.617.2 constellation and <5% ambiguous genome positions

pango-designation v1.2.32

• Added 108 new B.1.1.519 sequence designations based on #111