Devtools installing LeafCutter Error

[yr542]

I am trying to install leafcutter using the recommended command:

devtools::install_github("davidaknowles/leafcutter/leafcutter")

I get the error

/path/to/R_Version_4.2/StanHeaders/path/to/init_threadpool_tbb.hpp: fatal error: tbb/task_scheduler_init.h: No such file or directory
 #include <tbb/task_scheduler_init.h>
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make: *** [path/to/Makeconf:176: stanExports_bb_glm.o] Error 1
ERROR: compilation failed for package ‘leafcutter’
* removing ‘/path/to/leafcutter’
Warning message:
In i.p(...) :
  installation of package ‘/path/to/leafcutter_0.2.9.tar.gz’ had non-zero exit status

In case the issue with installation was just mine I asked someone else on my cluster to try and somehow they resolved the issue I have and then got the following interesting error:

Segmentation fault
* removing path/to/leafcutter
Warning message:
In i.p(...)  :
  installation of package path/to/leafcutter had non-zero exit status

What do I do to get around the error I am getting. Both me and this person cannot seem to install leafcutter using devtools::install_github.

[mjhemmerlein]

I installed rstan and rstantools through install.packages. I then tried to install using devtools::install_github("davidaknowles/leafcutter/leafcutter") and received the same error.

[TheWizier]

Been trying to install this in a docker container for a while now, and I found this thread:
https://www.reddit.com/r/bioinformatics/comments/1601hfr/installation_of_leafcutter_fails_with_fatal_error/
"It's because the tbb/task_scheduler_init.h is deprecated and was removed from the latest release of TBB, that's why the error message is about not finding the header file"

[yr542]

Yes but the issue remains that because of the error it cannot be installed.

[yaqisu]

Hi I wonder have you solved the problem? I also got the same issue and still cant figure it out...

[yaqisu]

Hi I wonder have you solved the problem? I also got the same issue and still cant figure it out...

nvm I followed the instruction here and it finally works!