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genome-grist run [ <target 2>... ] [ snakemake args ]
i had to look around to find what the appropriate snakemake args were (-j and -p) as i could not quickly* figure out what they were
also, genome-grist --help prints the correct menu, but doing:
genome-grist run --help errors out for lack of a config file input:
(grist) genome-grist run --help
Usage: genome-grist run [OPTIONS] CONFIGFILE [SNAKEMAKE_ARGS]...
Error: Missing argument 'CONFIGFILE'.
thus, it might be more intuitive to change that
The text was updated successfully, but these errors were encountered:
genome-grist run [ <target 2>... ] [ snakemake args ]
i had to look around to find what the appropriate snakemake args were (-j and -p) as i could not quickly* figure out what they were
also, genome-grist --help prints the correct menu, but doing:
genome-grist run --help errors out for lack of a config file input:
(grist) genome-grist run --help
Usage: genome-grist run [OPTIONS] CONFIGFILE [SNAKEMAKE_ARGS]...
Error: Missing argument 'CONFIGFILE'.
thus, it might be more intuitive to change that
The text was updated successfully, but these errors were encountered: