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actually use sample from RG to choose which blocks to use - effectively picking one individual
flag to select which sample to track
invent CSQ-like INFO tag for samples or use sample GT level output to store info, and actually make calls for each individual
make calls for each (affected) individual and annotate with smallest autozygous region subset only - useful for RD discovery, less so for e.g. corroborating deletions
The text was updated successfully, but these errors were encountered:
See e.g. nf-core/raredisease#429.
Several possibilities here:
The text was updated successfully, but these errors were encountered: