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Develop a new data ingest / ETL pipeline for indexing eQTL data into the new mongo database. #88

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sprintell opened this issue Jun 28, 2024 · 2 comments
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Develop a new data ingest / ETL pipeline for indexing eQTL data into the new mongo database. #88

sprintell opened this issue Jun 28, 2024 · 2 comments
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karatugo commented Jul 9, 2024

Issue Description

We need to develop a robust and scalable data ingest/ETL (Extract, Transform, Load) pipeline to facilitate the reading of eQTL (expression Quantitative Trait Loci) data from FTP sources, indexing it into a MongoDB database, and serving it via an API. This pipeline will ensure efficient data extraction, transformation, and retrieval to support downstream analysis and querying through a web service.

@karatugo karatugo self-assigned this Jul 9, 2024
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Moved to EBISPOT/eqtl-sumstats-service#3

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