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How are you creating your environment? I don't have any problems creating conda Fermitools environments with different names, and we've never had a report from a user with that problem.
The condaname in the activate.sh file just sets a directory name. I assume it's based on the installed conda package name(fermitools for Fermitools). The environment name is in $CONDA_PREFIX, so activate.sh sets paths like: export INST_DIR=$CONDA_PREFIX/share/${condaname}
which in my current conda environment ("fermi220") is:
~/miniconda3/envs/fermi220/share/fermitools
I just noticed there is a hardcoded line
export condaname="fermitools"
in the activate.sh
If you create the environment with a different name, it will fail to activate the conda environment.
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