From 7e43750a72e837e1cdcaf3019d4cdae84b055329 Mon Sep 17 00:00:00 2001
From: Ryan Ly <rly@lbl.gov>
Date: Wed, 20 Jul 2022 22:14:09 -0700
Subject: [PATCH 1/2] Fix pynwb test failing due to coverage not finding
 sources (#749)

---
 .github/workflows/run_pynwb_tests.yml | 5 +++--
 CHANGELOG.md                          | 5 +++++
 2 files changed, 8 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/run_pynwb_tests.yml b/.github/workflows/run_pynwb_tests.yml
index 2b19610d1..43edf309f 100644
--- a/.github/workflows/run_pynwb_tests.yml
+++ b/.github/workflows/run_pynwb_tests.yml
@@ -32,9 +32,10 @@ jobs:
           git clone https://github.com/NeurodataWithoutBorders/pynwb.git --recurse-submodules
           cd pynwb
           python -m pip install -r requirements-dev.txt -r requirements.txt
-          python -m pip install .  # this will install a particular version of hdmf instead of the current one
+          # must install in editable mode for coverage to find sources
+          python -m pip install -e .  # this will install a pinned version of hdmf instead of the current one
           cd ..
-          python -m pip uninstall -y hdmf
+          python -m pip uninstall -y hdmf  # uninstall the pinned version of hdmf
           python -m pip install .  # reinstall current branch of hdmf
           python -m pip list
 
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 84210732c..f8be3b7c3 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,8 +1,13 @@
 # HDMF Changelog
 
 ## HDMF 3.3.3 (Upcoming)
+
+### Minor improvements
 - Relax input validation of `HDF5IO` to allow for s3fs support. Existing arguments of `HDF5IO` are modified as follows: i) `mode` was given a default value of "r", ii) `path` was given a default value of `None`, and iii) `file` can now accept an `S3File` type argument. @bendichter ([#746](https://github.com/hdmf-dev/hdmf/pull/746))
 
+### Bug fixes
+- Fixed PyNWB dev CI. @rly ([#749](https://github.com/hdmf-dev/hdmf/pull/749))
+
 ## HDMF 3.3.2 (June 27, 2022)
 
 ### Bug fixes

From ef0a800751415b02228e348e360175af390ee5a4 Mon Sep 17 00:00:00 2001
From: Ryan Ly <rly@lbl.gov>
Date: Wed, 20 Jul 2022 22:24:46 -0700
Subject: [PATCH 2/2] Allow manual triggering of some GitHub Actions (#744)

* Allow manual triggering of some GitHub Actions

* Update changelog
---
 .github/workflows/check_external_links.yml | 1 +
 .github/workflows/run_all_tests.yml        | 1 +
 .github/workflows/run_coverage.yml         | 1 +
 .github/workflows/run_pynwb_tests.yml      | 1 +
 CHANGELOG.md                               | 3 ++-
 5 files changed, 6 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/check_external_links.yml b/.github/workflows/check_external_links.yml
index 55e957bfc..10ea8a683 100644
--- a/.github/workflows/check_external_links.yml
+++ b/.github/workflows/check_external_links.yml
@@ -3,6 +3,7 @@ on:
   pull_request:
   schedule:
     - cron: '0 5 * * *'  # once per day at midnight ET
+  workflow_dispatch:
 
 jobs:
   check-external-links:
diff --git a/.github/workflows/run_all_tests.yml b/.github/workflows/run_all_tests.yml
index 9f3e255c1..b32edf29f 100644
--- a/.github/workflows/run_all_tests.yml
+++ b/.github/workflows/run_all_tests.yml
@@ -5,6 +5,7 @@ on:
   push:
     tags:  # run only on new tags that follow semver
       - '/^[0-9]+(\.[0-9]+)?(\.[0-9]+)?$/'
+  workflow_dispatch:
 
 jobs:
   run-all-tests:
diff --git a/.github/workflows/run_coverage.yml b/.github/workflows/run_coverage.yml
index 2a82122b5..b84703350 100644
--- a/.github/workflows/run_coverage.yml
+++ b/.github/workflows/run_coverage.yml
@@ -7,6 +7,7 @@ on:
       - 'latest'
       - 'latest-tmp'
   pull_request:
+  workflow_dispatch:
 
 jobs:
   run-coverage:
diff --git a/.github/workflows/run_pynwb_tests.yml b/.github/workflows/run_pynwb_tests.yml
index 43edf309f..afba1dfd5 100644
--- a/.github/workflows/run_pynwb_tests.yml
+++ b/.github/workflows/run_pynwb_tests.yml
@@ -3,6 +3,7 @@ on:
   pull_request:
   schedule:
     - cron: '0 5 * * *'  # once per day at midnight ET
+  workflow_dispatch:
 
 jobs:
   run-tests:
diff --git a/CHANGELOG.md b/CHANGELOG.md
index f8be3b7c3..c5e495dab 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,8 +1,9 @@
 # HDMF Changelog
 
-## HDMF 3.3.3 (Upcoming)
+## HDMF 3.4.0 (upcoming)
 
 ### Minor improvements
+- Allow manual triggering of some GitHub Actions. @rly ([#744](https://github.com/hdmf-dev/hdmf/pull/744))
 - Relax input validation of `HDF5IO` to allow for s3fs support. Existing arguments of `HDF5IO` are modified as follows: i) `mode` was given a default value of "r", ii) `path` was given a default value of `None`, and iii) `file` can now accept an `S3File` type argument. @bendichter ([#746](https://github.com/hdmf-dev/hdmf/pull/746))
 
 ### Bug fixes