Update easyconfig files for MPICH and MVAPICH2 and their toolchains #2589

besserox · 2016-02-29T15:00:53Z

I would like to have an equivalent of the foss toolchain but with MVAPICH2 instead of OpenMPI.

I have updated the MVAPICH2 easyblock to be able to compile the latest versions of MPVACH2 (cf Update easyblocks for MPICH and MVAPICH2 easybuild-easyblocks#844)
I'm proposing a new toolchain named foss_mv2, same as foss except that OpenMPI is replaced by MVAPICH2. Feel free to propose another name that better suits you.
I have started discussing with MVAPICH2 team so they will keep their source tarballs available online in the future. I'd like to get this pull request merged first to demonstrate them how all this works.

Same as foss 2016a except that OpenMPI is replaced by MVAPICH2.

hpcugentbot · 2016-02-29T15:00:56Z

Automatic reply from Jenkins: Can I test this?

boegel · 2016-02-29T18:59:53Z

Jenkins: ok to test

boegel · 2016-02-29T19:02:06Z

easybuild/easyconfigs/f/foss_mv2/foss_mv2-2016a.eb

@@ -0,0 +1,35 @@
+easyblock = 'Toolchain'
+
+name = 'foss_mv2'


you're reinventing the existing gmvolf toolchain :)

the foss toolchain deliberately is not composed of the first letter of every component (like goolf, gmvolf, ...), to retain the freedom of changing some components at some point in time (e.g. change OpenMPI to MVAPICH2 in future release).

So, maybe stick to gmvolf as naming?

Sure, it can stay gmvolf.

boegel · 2016-02-29T19:06:33Z

@besserox: thanks for reaching out to the MVAPICH2 maintainers to keep the source tarballs for older releases available, this has been pretty annoying...

hpcugentbot · 2016-02-29T20:15:22Z

Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/6666/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

…nto mvapich2

boegel · 2016-03-01T14:20:09Z

I tested the MVAPICH2 easyconfigs included in here on top of easybuilders/easybuild-easyblocks#844 (with besserox/easybuild-easyblocks#2 included), works like a charm.

hpcugentbot · 2016-03-01T16:57:59Z

Easyconfigs unit test suite FAILed.

See https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/6693/console for more details.

Please fix the reported issues by pushing additional commits to the branch corresponding with this pull request; contact @boegel if you're not sure what to do.

besserox · 2016-03-01T17:36:07Z

Now this pull request contains:

new easyconfig files for MVAPICH2 and the toolchain gmvolf/2016a
new easyconfig files for MPICH and the toolchain gmpolf/2016a

Regarding the versioning: I suggest using <year>[ab] if the toolchain is using exactly the same software version as the equivalent foss one. Otherwise, it can just use a <year>.<month>.

…its own easyblock

besserox · 2016-03-01T17:44:09Z

I believe the testing errors should go away after the merge of easybuilders/easybuild-easyblocks#844

hpcugentbot · 2016-03-01T17:58:30Z

Easyconfigs unit test suite FAILed.

See https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/6698/console for more details.

Please fix the reported issues by pushing additional commits to the branch corresponding with this pull request; contact @boegel if you're not sure what to do.

boegel · 2016-03-01T18:29:01Z

@besserox: yes, the easyblock not being merged is the problem with the failing tests (since there's no MPICH easyblock yet)

besserox · 2016-03-01T19:28:42Z

Should we also update the easyconfig file m/MPICH2/MPICH2-1.1-GCC-4.8.1.eb?

hpcugentbot · 2016-03-01T19:40:25Z

Easyconfigs unit test suite FAILed.

See https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/6700/console for more details.

Please fix the reported issues by pushing additional commits to the branch corresponding with this pull request; contact @boegel if you're not sure what to do.

boegel · 2016-03-01T19:51:57Z

@besserox: let's update MPICH2 in a separate PR?

boegel · 2016-03-02T10:26:21Z

Test report by @boegel
SUCCESS
Build succeeded for 14 out of 14 (14 easyconfigs in this PR)
Linux centos linux 7.2.1511, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/fd1312097e0dc93e1499 for a full test report.

boegel · 2016-03-02T12:35:42Z

Jenkins: test this please

hpcugentbot · 2016-03-02T12:56:03Z

Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/6718/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

…nto mvapich2

hpcugentbot · 2016-03-10T16:44:15Z

Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/7007/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

boegel · 2016-03-16T10:43:49Z

easybuild/easyconfigs/g/gmpolf/gmpolf-2016a.eb

+# For binutils, stick to http://wiki.osdev.org/Cross-Compiler_Successful_Builds
+dependencies = [
+    ('GCC', gccver),
+    ('MVAPICH2', '2.2b', '', ('GCC', gccver)),


@besserox this should be MPICH?

boegel · 2016-03-16T10:47:28Z

@besserox we usually include HPL easyconfigs for new toolchains, by means of testcase... Can you add an HPL easyconfig for both the new gmpolf and gmvolf toolchain definitions?

…nto mvapich2

…vpolf/2016a

…nto mvapich2

besserox · 2016-03-16T12:42:11Z

@boegel Fixed

hpcugentbot · 2016-03-16T13:02:40Z

Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/7146/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

hpcugentbot · 2016-03-16T13:03:05Z

Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/7147/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

boegel · 2016-03-16T14:06:29Z

Test report by @boegel
SUCCESS
Build succeeded for 16 out of 16 (16 easyconfigs in this PR)
node2159.delcatty.os - Linux SL 6.7, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.6.6
See https://gist.github.com/3679705cf3afbc4145ec for a full test report.

boegel · 2016-03-16T17:31:11Z

Good to go, thanks @besserox!

Update easyconfig files for MPICH and MVAPICH2 and their toolchains

besserox added 2 commits February 29, 2016 15:06

Add easyconfig for latest MVAPICH2 2.1 and 2.2b

9615ed7

Add new toolchain foos_mv2 2016a

59b3ad2

Same as foss 2016a except that OpenMPI is replaced by MVAPICH2.

boegel added this to the v2.7.0 milestone Feb 29, 2016

boegel reviewed Feb 29, 2016
View reviewed changes

besserox added 3 commits March 1, 2016 14:39

Rename foss_mv2/2016a to gmvolf/2016a

f1ea4e4

Add new toolchain gmpolf/2016a (same as foss/2016a but with MPICH 3.2)

41d4edb

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

5c0d7fd

…nto mvapich2

boegel mentioned this pull request Mar 1, 2016

Update easyblocks for MPICH and MVAPICH2 easybuilders/easybuild-easyblocks#844

Merged

Remove explicit ConfigureMake in MPICH easyconfig because it now has …

6d09160

…its own easyblock

Update MPICH easyconfig files

daa3272

besserox changed the title ~~Updating MVAPICH2 easyconfig files and new FOSS-like toolchain with MVAPICH2~~ Update easyconfig files for MPICH and MVAPICH2 and their toolchains Mar 1, 2016

This was referenced Mar 2, 2016

Updated mpich derivatives easyconfigs #2505

Closed

Easyconfig files adapted to use the new MPICH easyblocks #2399

Closed

besserox added 3 commits March 2, 2016 14:50

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

b3a16b0

…nto mvapich2

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

593564d

…nto mvapich2

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

580e129

…nto mvapich2

boegel reviewed Mar 16, 2016
View reviewed changes

besserox added 6 commits March 16, 2016 12:03

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

6784fd7

…nto mvapich2

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

4f2d8a7

…nto mvapich2

Fix typo

43d5d37

Cleanup

82a53a3

Add easyconfig for HPL with the two new toolchain gmpolf/2016a and gm…

dff5ae0

…vpolf/2016a

Merge branch 'develop' of github.com:hpcugent/easybuild-easyconfigs i…

9ee8ef5

…nto mvapich2

boegel added a commit that referenced this pull request Mar 16, 2016

Merge pull request #2589 from besserox/mvapich2

6a1cfd7

Update easyconfig files for MPICH and MVAPICH2 and their toolchains

boegel merged commit 6a1cfd7 into easybuilders:develop Mar 16, 2016

besserox deleted the mvapich2 branch March 16, 2016 17:41

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Update easyconfig files for MPICH and MVAPICH2 and their toolchains #2589

Update easyconfig files for MPICH and MVAPICH2 and their toolchains #2589

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Update easyconfig files for MPICH and MVAPICH2 and their toolchains #2589

Update easyconfig files for MPICH and MVAPICH2 and their toolchains #2589

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