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Portal "matchedNormalSampleSubmitterId" not matching what is in Song #15

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rtisma opened this issue Feb 6, 2018 · 1 comment
Open

Portal "matchedNormalSampleSubmitterId" not matching what is in Song #15

rtisma opened this issue Feb 6, 2018 · 1 comment
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@KevinFHartmann
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backlog AB:1:Backlog bug Something isn't working SP:3

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@rtisma
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rtisma commented Feb 6, 2018 

{
    "analysisId": "ecf06ae6-7379-41b0-8aa6-b710485ea9d4",
    "analysisState": "PUBLISHED",
    "analysisType": "variantCall",
    "experiment": {
        "analysisId": "ecf06ae6-7379-41b0-8aa6-b710485ea9d4",
        "info": {},
        "matchedNormalSampleSubmitterId": "RK278_B01",
        "variantCallingTool": "Broad variant call pipeline"
    },
    "file": [
        {
            "analysisId": "ecf06ae6-7379-41b0-8aa6-b710485ea9d4",
            "fileAccess": "controlled",
            "fileMd5sum": "bc8e358a11dc4da7ca525f29acb0c796",
            "fileName": "6012cb02-c623-11e3-bf01-24c6515278c0.broad-dRanger-11.20160508.somatic.sv.vcf.gz",
            "fileSize": 7362,
            "fileType": "VCF",
            "info": {},
            "objectId": "9ef1b6ab-5ac2-54a8-a1dc-f43b22483637",
            "studyId": "LIRI-JP"
        },
...

However the file
https://dcc.icgc.org/repositories/files/FI403028

does not have the matchedNormalSampleSubmitterId field from the Donor section filled in.

Investigate why its missing, and fix.
@rtisma rtisma added the bug Something isn't working label Feb 6, 2018
@Fgerthoffert Fgerthoffert added this to the ARGO - Sprint 201 milestone Dec 10, 2018
@b-f-chan b-f-chan added the next AB:2:Ready For Implementation label Dec 11, 2018
@alekspejovic alekspejovic mentioned this issue Jan 15, 2019
Closed
@Fgerthoffert Fgerthoffert removed this from the ARGO - Sprint 1901 milestone Jan 24, 2019
@rosibaj rosibaj added backlog AB:1:Backlog and removed next AB:2:Ready For Implementation labels Mar 6, 2019
@rosibaj
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rosibaj commented Mar 7, 2019

@rtisma Can you please check if this ticket is still valid?

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@rtisma @Fgerthoffert @rosibaj @KevinFHartmann @b-f-chan