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Add seqfold for RNA/DNA stability predictions #18

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jdwinkler opened this issue Jan 3, 2021 · 2 comments
Open

Add seqfold for RNA/DNA stability predictions #18

jdwinkler opened this issue Jan 3, 2021 · 2 comments
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enhancement New feature or request

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@jdwinkler
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See here: https://pypi.org/project/seqfold/

This is a substitute for ViennaRNA etc, but may not be quite as good. However, far more convenient.
@jdwinkler jdwinkler added the enhancement New feature or request label Jan 3, 2021
@jdwinkler jdwinkler self-assigned this Jan 3, 2021
@jdwinkler
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Note: by add I just mean add to the requirements at least, It might be possible to generate folding predictions around the genome/mRNA from the annotations.

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Also of interest:

https://pypi.org/project/osTIR/ for predicting translation initiation rates.

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