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Cells.csv column name information #118

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EmiliyaStol opened this issue Jul 12, 2024 · 1 comment
Open

Cells.csv column name information #118

EmiliyaStol opened this issue Jul 12, 2024 · 1 comment
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@EmiliyaStol
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I am interested in analyzing cellular measurement data, such as the size of the nucleus. I have the understanding that the column “ObjectNumber” in the Cells.csv files can be used to identify individual cells. I was wondering where I may retrieve documentation information for the column names of the Cells.csv files and other csv files.

@shntnu
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shntnu commented Jul 16, 2024

Are you interested in single cell level data? If so, I'd recommend working directly with the SQLite files, e.g., https://open.quiltdata.com/b/cellpainting-gallery/tree/cpg0016-jump/source_4/workspace/backend/2021_05_10_Batch3/BR00123506/BR00123506.sqlite

@shntnu shntnu added the cpg0016 label Jul 16, 2024
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