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poetry.lock
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poetry.lock
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# This file is automatically @generated by Poetry 1.4.0 and should not be changed by hand.
[[package]]
name = "altair"
version = "5.2.0"
description = "Vega-Altair: A declarative statistical visualization library for Python."
category = "main"
optional = false
python-versions = ">=3.8"
files = [
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{file = "altair-5.2.0.tar.gz", hash = "sha256:2ad7f0c8010ebbc46319cc30febfb8e59ccf84969a201541c207bc3a4fa6cf81"},
]
[package.dependencies]
jinja2 = "*"
jsonschema = ">=3.0"
numpy = "*"
packaging = "*"
pandas = ">=0.25"
toolz = "*"
typing-extensions = {version = ">=4.0.1", markers = "python_version < \"3.11\""}
[package.extras]
dev = ["anywidget", "geopandas", "hatch", "ipython", "m2r", "mypy", "pandas-stubs", "pyarrow (>=11)", "pytest", "pytest-cov", "ruff (>=0.1.3)", "types-jsonschema", "types-setuptools", "vega-datasets", "vegafusion[embed] (>=1.4.0)", "vl-convert-python (>=1.1.0)"]
doc = ["docutils", "jinja2", "myst-parser", "numpydoc", "pillow (>=9,<10)", "pydata-sphinx-theme (>=0.14.1)", "scipy", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinxext-altair"]
[[package]]
name = "anndata"
version = "0.10.6"
description = "Annotated data."
category = "main"
optional = false
python-versions = ">=3.9"
files = [
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{file = "anndata-0.10.6.tar.gz", hash = "sha256:16ada7ed7d38552ce56d8e8b2348e18a5fc81294ce8a7ea282acf30dc42cd6c2"},
]
[package.dependencies]
array-api-compat = ">1.4,<1.5 || >1.5"
exceptiongroup = {version = "*", markers = "python_version < \"3.11\""}
h5py = ">=3.1"
natsort = "*"
numpy = ">=1.23"
packaging = ">=20.0"
pandas = ">=1.4,<2.1.0rc0 || >2.1.0rc0,<2.1.2 || >2.1.2"
scipy = ">1.8"
[package.extras]
dev = ["pytest-xdist", "setuptools-scm"]
doc = ["awkward (>=2.0.7)", "ipython", "myst-parser", "nbsphinx", "readthedocs-sphinx-search", "scanpydoc[theme,typehints] (>=0.13.4)", "sphinx (>=4.4)", "sphinx-autodoc-typehints (>=1.11.0)", "sphinx-book-theme (>=1.1.0)", "sphinx-copybutton", "sphinx-design (>=0.5.0)", "sphinx-issues", "sphinxext-opengraph", "zarr"]
gpu = ["cupy"]
test = ["awkward (>=2.3)", "boltons", "dask[array,distributed] (>=2022.09.2)", "httpx", "joblib", "loompy (>=3.0.5)", "matplotlib", "openpyxl", "pyarrow", "pytest (>=7.3)", "pytest-cov (>=2.10)", "pytest-memray", "pytest-mock", "scanpy", "scikit-learn", "zarr"]
[[package]]
name = "array-api-compat"
version = "1.5.1"
description = "A wrapper around NumPy and other array libraries to make them compatible with the Array API standard"
category = "main"
optional = false
python-versions = ">=3.8"
files = [
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{file = "array_api_compat-1.5.1.tar.gz", hash = "sha256:5044d260d137ad67018eaf15f3efe0882e9d036fd47f0a7127a44493b620e08e"},
]
[package.extras]
cupy = ["cupy"]
numpy = ["numpy"]
[[package]]
name = "arviz"
version = "0.17.1"
description = "Exploratory analysis of Bayesian models"
category = "main"
optional = false
python-versions = ">=3.9"
files = [
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h5netcdf = ">=1.0.2"
matplotlib = ">=3.5"
numpy = ">=1.22.0,<2.0"
packaging = "*"
pandas = ">=1.4.0"
scipy = ">=1.8.0"
setuptools = ">=60.0.0"
typing-extensions = ">=4.1.0"
xarray = ">=0.21.0"
xarray-einstats = ">=0.3"
[package.extras]
all = ["bokeh (>=1.4.0,<3.0)", "contourpy", "dask[distributed]", "netcdf4", "numba", "ujson", "xarray-datatree", "zarr (>=2.5.0)"]
[[package]]
name = "attrs"
version = "23.2.0"
description = "Classes Without Boilerplate"
category = "main"
optional = false
python-versions = ">=3.7"
files = [
{file = "attrs-23.2.0-py3-none-any.whl", hash = "sha256:99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1"},
{file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"},
]
[package.extras]
cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
dev = ["attrs[tests]", "pre-commit"]
docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
tests = ["attrs[tests-no-zope]", "zope-interface"]
tests-mypy = ["mypy (>=1.6)", "pytest-mypy-plugins"]
tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist[psutil]"]
[[package]]
name = "babel"
version = "2.14.0"
description = "Internationalization utilities"
category = "dev"
optional = false
python-versions = ">=3.7"
files = [
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]
[package.extras]
dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
[[package]]
name = "blinker"
version = "1.7.0"
description = "Fast, simple object-to-object and broadcast signaling"
category = "main"
optional = false
python-versions = ">=3.8"
files = [
{file = "blinker-1.7.0-py3-none-any.whl", hash = "sha256:c3f865d4d54db7abc53758a01601cf343fe55b84c1de4e3fa910e420b438d5b9"},
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]
[[package]]
name = "cachetools"
version = "5.3.3"
description = "Extensible memoizing collections and decorators"
category = "main"
optional = false
python-versions = ">=3.7"
files = [
{file = "cachetools-5.3.3-py3-none-any.whl", hash = "sha256:0abad1021d3f8325b2fc1d2e9c8b9c9d57b04c3932657a72465447332c24d945"},
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]
[[package]]
name = "certifi"
version = "2024.2.2"
description = "Python package for providing Mozilla's CA Bundle."
category = "main"
optional = false
python-versions = ">=3.6"
files = [
{file = "certifi-2024.2.2-py3-none-any.whl", hash = "sha256:dc383c07b76109f368f6106eee2b593b04a011ea4d55f652c6ca24a754d1cdd1"},
{file = "certifi-2024.2.2.tar.gz", hash = "sha256:0569859f95fc761b18b45ef421b1290a0f65f147e92a1e5eb3e635f9a5e4e66f"},
]
[[package]]
name = "cffi"
version = "1.16.0"
description = "Foreign Function Interface for Python calling C code."
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optional = false
python-versions = ">=3.8"
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interpolatable = ["munkres", "pycairo", "scipy"]
lxml = ["lxml (>=4.0)"]
pathops = ["skia-pathops (>=0.5.0)"]
plot = ["matplotlib"]