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Dear IDBAUD support team,
What does it mean that "terminate called after throwing an instance of 'std::bad_alloc'"?
My error file: IDBA_UD_lake_backup.err.txt
My shell script: /services/tools/idba/1.1.1/bin/idba_ud --pre_correction --num_threads 40 --min_count 3 --mink 40 --maxk 100 --min_contig 1000 -r ${lake_backup_fa} -o ${IDBA_UD_out}
I have a 701GB merged .fa file. But, my CPU cores' limitation is 40 and memory limitation is 1500gb.
Is it due to I have a very big .fa file to be assembled?
Best,
Bing
The text was updated successfully, but these errors were encountered:
Hi Bing, I have met the same problem. Have you figure out what is the cause of this problem?
Best, Tianze
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Dear IDBAUD support team,
What does it mean that "terminate called after throwing an instance of 'std::bad_alloc'"?
My error file:
IDBA_UD_lake_backup.err.txt
My shell script:
/services/tools/idba/1.1.1/bin/idba_ud --pre_correction --num_threads 40 --min_count 3 --mink 40 --maxk 100 --min_contig 1000 -r ${lake_backup_fa} -o ${IDBA_UD_out}
I have a 701GB merged .fa file. But, my CPU cores' limitation is 40 and memory limitation is 1500gb.
Is it due to I have a very big .fa file to be assembled?
Best,
Bing
The text was updated successfully, but these errors were encountered: