From 4440d9b8a65d73716e84e91a00540a48a2801105 Mon Sep 17 00:00:00 2001 From: Maxime U Garcia Date: Wed, 20 Dec 2023 09:26:34 +0100 Subject: [PATCH] Update nextflow.config it should be docker.runOptions --- nf_core/pipeline-template/nextflow.config | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nf_core/pipeline-template/nextflow.config b/nf_core/pipeline-template/nextflow.config index b4402c46a6..dec8051a17 100644 --- a/nf_core/pipeline-template/nextflow.config +++ b/nf_core/pipeline-template/nextflow.config @@ -120,10 +120,10 @@ profiles { shifter.enabled = false charliecloud.enabled = false apptainer.enabled = false - runOptions = '-u $(id -u):$(id -g)' + docker.runOptions = '-u $(id -u):$(id -g)' } arm { - docker.runOptions = '-u $(id -u):$(id -g) --platform=linux/amd64' + docker.runOptions = '-u $(id -u):$(id -g) --platform=linux/amd64' } singularity { singularity.enabled = true