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Metadata manifest backlog cleanup #53

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kthrog opened this issue Feb 17, 2021 · 3 comments
Open
1 task

Metadata manifest backlog cleanup #53

kthrog opened this issue Feb 17, 2021 · 3 comments
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help wanted Extra attention is needed

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@kthrog
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kthrog commented Feb 17, 2021

Please add metadata manifests generated by the NF Data Curator app here that have been completed, but haven't yet uploaded to Synapse. We will resolve these in an upcoming meeting:

  • TEMPLATE: [Manifest title - if applicable](link to manifest) | project synID
@kthrog kthrog added the help wanted Extra attention is needed label Feb 17, 2021
@kthrog kthrog self-assigned this Feb 17, 2021
@kthrog
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kthrog commented Feb 17, 2021

@allaway
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allaway commented Feb 17, 2021

@allaway
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allaway commented Feb 19, 2021

I did a couple of these yesterday so that they are ready for review by funder.

As a note, all blank values seem to get submitted as the string nan rather than as a null value. After adding the annotations, I manually cleaned these strings from the annotations (basically by going to the fileview for the project, adding all the annotation keys, retrieving csv, ctrl+f 'nan' whole words and replace with blank, and then reuploading. This is ok for a small number of manifests but not sustainable in the long run.

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