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requirements.txt
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requirements.txt
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#
# This file is autogenerated by pip-compile with Python 3.10
# by the following command:
#
# pip-compile --resolver=backtracking
#
astor==0.8.1
# via formulaic
attrs==23.1.0
# via niworkflows
bids-validator==1.11.0
# via pybids
bokeh==3.1.1
# via tedana
certifi==2023.5.7
# via requests
charset-normalizer==3.1.0
# via requests
ci-info==0.3.0
# via etelemetry
click==8.1.3
# via
# nipype
# pybids
contourpy==1.0.7
# via
# bokeh
# matplotlib
cycler==0.11.0
# via matplotlib
cython==0.29.34
# via nitime
docopt==0.6.2
# via num2words
etelemetry==0.3.0
# via nipype
filelock==3.12.0
# via nipype
fonttools==4.39.3
# via matplotlib
formulaic==0.5.2
# via pybids
greenlet==2.0.2
# via sqlalchemy
h5py==3.8.0
# via nitransforms
idna==3.4
# via requests
imageio==2.28.1
# via scikit-image
indexed-gzip==1.7.1
# via smriprep
interface-meta==1.3.0
# via formulaic
isodate==0.6.1
# via rdflib
jinja2==3.1.2
# via
# bokeh
# niworkflows
joblib==1.2.0
# via
# nilearn
# scikit-learn
kiwisolver==1.4.4
# via matplotlib
lazy-loader==0.2
# via scikit-image
lockfile==0.12.2
# via smriprep
looseversion==1.1.2
# via
# nipype
# niworkflows
# smriprep
lxml==4.9.2
# via
# nilearn
# prov
# svgutils
markupsafe==2.1.2
# via jinja2
matplotlib==3.7.1
# via
# nitime
# niworkflows
# seaborn
# smriprep
# tedana
networkx==3.1
# via
# nipype
# nitime
# prov
# scikit-image
nibabel==5.1.0
# via
# fmriprep-rodents (setup.py)
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pybids
# smriprep
# tedana
nilearn==0.10.1
# via
# niworkflows
# tedana
nipype==1.8.6
# via
# fmriprep-rodents (setup.py)
# niworkflows
# smriprep
nirodents==0.2.8
# via fmriprep-rodents (setup.py)
nitime==0.10.1
# via fmriprep-rodents (setup.py)
nitransforms==22.0.0
# via
# fmriprep-rodents (setup.py)
# niworkflows
niworkflows==1.7.9
# via
# fmriprep-rodents (setup.py)
# smriprep
num2words==0.5.12
# via pybids
numpy==1.24.3
# via
# bokeh
# contourpy
# fmriprep-rodents (setup.py)
# formulaic
# h5py
# imageio
# matplotlib
# nibabel
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pandas
# pybids
# pywavelets
# scikit-image
# scikit-learn
# scipy
# seaborn
# smriprep
# tedana
# tifffile
packaging==23.1
# via
# bokeh
# matplotlib
# nibabel
# nilearn
# nipype
# niworkflows
# scikit-image
# smriprep
pandas==2.0.1
# via
# bokeh
# fmriprep-rodents (setup.py)
# formulaic
# nilearn
# niworkflows
# pybids
# seaborn
# tedana
pillow==9.5.0
# via
# bokeh
# imageio
# matplotlib
# scikit-image
prov==2.0.0
# via nipype
pybids==0.16.1
# via
# fmriprep-rodents (setup.py)
# niworkflows
# smriprep
# templateflow
pydot==1.4.2
# via nipype
pyparsing==3.0.9
# via
# matplotlib
# pydot
# rdflib
python-dateutil==2.8.2
# via
# matplotlib
# nipype
# pandas
# prov
pytz==2023.3
# via pandas
pywavelets==1.4.1
# via scikit-image
pyyaml==6.0
# via
# bokeh
# fmriprep-rodents (setup.py)
# niworkflows
# smriprep
rdflib==6.3.2
# via
# nipype
# prov
requests==2.30.0
# via
# etelemetry
# fmriprep-rodents (setup.py)
# nilearn
# templateflow
scikit-image==0.20.0
# via
# fmriprep-rodents (setup.py)
# niworkflows
scikit-learn==1.2.2
# via
# nilearn
# tedana
scipy==1.10.1
# via
# formulaic
# nilearn
# nipype
# nitime
# nitransforms
# niworkflows
# pybids
# scikit-image
# scikit-learn
# tedana
seaborn==0.12.2
# via niworkflows
simplejson==3.19.1
# via nipype
six==1.16.0
# via
# isodate
# python-dateutil
smriprep==0.11.1
# via fmriprep-rodents (setup.py)
sqlalchemy==2.0.12
# via pybids
svgutils==0.3.4
# via niworkflows
tedana==0.0.9
# via fmriprep-rodents (setup.py)
templateflow==0.7.2
# via
# fmriprep-rodents (setup.py)
# niworkflows
# smriprep
threadpoolctl==3.1.0
# via
# scikit-learn
# tedana
tifffile==2023.4.12
# via scikit-image
toml==0.10.2
# via fmriprep-rodents (setup.py)
tornado==6.3.1
# via bokeh
tqdm==4.65.0
# via templateflow
traits==6.3.2
# via
# nipype
# niworkflows
transforms3d==0.4.1
# via niworkflows
typing-extensions==4.5.0
# via
# formulaic
# sqlalchemy
tzdata==2023.3
# via pandas
urllib3==2.0.2
# via requests
wrapt==1.15.0
# via formulaic
xyzservices==2023.2.0
# via bokeh