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[PRE REVIEW]: SAMPL: An agent-based model to evaluate spatial sampling strategies #7278

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editorialbot opened this issue Sep 25, 2024 · 11 comments
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Submitting author: @ifoxfoot (Iris Foxfoot)
Repository: https://github.com/EcoModTeam/SAMPL
Branch with paper.md (empty if default branch):
Version: 1.0.0
Editor: Pending
Reviewers: Pending
Managing EiC: Kristen Thyng

Status

status

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HTML: <a href="https://joss.theoj.org/papers/dd72b944eeb3d50c50b798a84333d7e6"><img src="https://joss.theoj.org/papers/dd72b944eeb3d50c50b798a84333d7e6/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/dd72b944eeb3d50c50b798a84333d7e6/status.svg)](https://joss.theoj.org/papers/dd72b944eeb3d50c50b798a84333d7e6)

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Thanks for submitting your paper to JOSS @ifoxfoot. Currently, there isn't a JOSS editor assigned to your paper.

@ifoxfoot if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

Editor instructions

The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

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@editorialbot editorialbot added pre-review Track: 6 (ESE) Earth Sciences and Ecology labels Sep 25, 2024
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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1111/j.1600-0587.2010.06421.x is OK
- 10.1111/j.1365-2664.2008.01545.x is OK
- 10.1890/14-1826.1 is OK
- 10.1899/04-138.1 is OK
- 10.1007/s10750-019-04017-y is OK
- 10.1080/01621459.1990.10474975 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: ArcGIS Pro
- No DOI given, and none found for title: NetLogo

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None

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Software report:

github.com/AlDanial/cloc v 1.90  T=0.01 s (627.6 files/s, 31881.5 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
TeX                              1              9              0            104
Markdown                         2             35              0             75
YAML                             1              1              4             25
CSV                              1              0              0              1
-------------------------------------------------------------------------------
SUM:                             5             45              4            205
-------------------------------------------------------------------------------

Commit count by author:

    22	ifoxfoot
     6	Iris Foxfoot
     1	Kiara Cushway
     1	TSwan
     1	cushkia1

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Paper file info:

📄 Wordcount for paper.md is 843

✅ The paper includes a Statement of need section

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License info:

🟡 License found: GNU General Public License v3.0 (Check here for OSI approval)

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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Five most similar historical JOSS papers:

fishStan: Hierarchical Bayesian models for fisheries
Submitting author: @rerickson-usgs
Handling editor: @marcosvital (Active)
Reviewers: @MikeKaller, @Cole-Monnahan-NOAA
Similarity score: 0.7075

portalcasting: Supporting automated forecasting of rodent populations
Submitting author: @gmyenni
Handling editor: @marcosvital (Active)
Reviewers: @ViniciusBRodrigues, @FlukeAndFeather
Similarity score: 0.7006

Cacatoo: building, exploring, and sharing spatially structured models of biological systems
Submitting author: @bramvandijk88
Handling editor: @Bisaloo (Retired)
Reviewers: @emilydolson, @TimKam
Similarity score: 0.6906

FielDHub: A Shiny App for Design of Experiments in Life Sciences
Submitting author: @DidierMurilloF
Handling editor: @csoneson (Active)
Reviewers: @Prof-ThiagoOliveira, @dlebauer
Similarity score: 0.6867

SSMSE: An R package for Management Strategy Evaluation with Stock Synthesis Operating Models
Submitting author: @k-doering-NOAA
Handling editor: @sbenthall (Active)
Reviewers: @quang-huynh, @iagomosqueira
Similarity score: 0.6866

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

@kthyng
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kthyng commented Sep 25, 2024

@ifoxfoot Hi! I don't see any code — where is your software repository?

@ifoxfoot
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@kthyng Hi! It is in the repository here https://github.com/EcoModTeam/SAMPL. The code is in the file called SAMPL.nlogo. Let me know if it's not showing up for you!

@ifoxfoot
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@kthyng re suggested reviewers. It looks like there is one published JOSS paper that is about a NetLogo model. I would recommend the authors of this paper https://joss.theoj.org/papers/10.21105/joss.05731 as reviewers.

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kthyng commented Sep 25, 2024

Hi @ifoxfoot and thanks for your submission! I am looking for some specific items to make sure your submission fits our requirements at a high level (not at the more detailed review level) before moving on to finding an editor or putting this on our waitlist if no relevant editors are available. I'll comment over time as I have a chance to go through them:

In the meantime, please take a look at the comments above ⬆️ from the editorialbot to address any DOI, license, or paper issues if you're able (there may not be any), or suggest reviewers. For reviewers, please suggest 5 reviewers from the database listed above or your own (non-conflicted) extended network. Their github handles are most useful to receive but please don't use "@" to reference them since it will prematurely ping them.

Ok this will be tricky to find reviewers for this sort of niche paper – please dig deep for more reviewer suggestions if you can!

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