diff --git a/DESCRIPTION b/DESCRIPTION index 6c5f8fce1..b60237a01 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -23,7 +23,7 @@ Description: Mixed models for repeated measures (MMRM) are a popular choice for analyzing longitudinal continuous outcomes in randomized clinical trials and beyond; see Cnaan, Laird and Slasor (1997) - for a tutorial and Mallinckrodt, Lane and Schnell (2008) + for a tutorial and Mallinckrodt, Lane, Schnell et al. (2008) for a review. This package implements MMRM based on the marginal linear model without random effects using Template Model Builder ('TMB') which enables fast and robust model diff --git a/inst/REFERENCES.bib b/inst/REFERENCES.bib index a508dcd0d..16e25fa3f 100644 --- a/inst/REFERENCES.bib +++ b/inst/REFERENCES.bib @@ -119,7 +119,7 @@ @article{schluchter1990small @article{Cnaan1997, author = {Cnaan, A. and Laird, N. M. and Slasor, P.}, - journal = {Stat Med}, + journal = {Statistics in Medicine}, title = {{{U}sing the general linear mixed model to analyse unbalanced repeated measures and longitudinal data}}, year = {1997}, month = {Oct}, @@ -149,7 +149,7 @@ @Article{Laird1982 @Article{Littell2000, author = {Littell, R. C. and Pendergast, J. and Natarajan, R.}, - journal = {Stat Med}, + journal = {Statistics in Medicine}, title = {{{M}odelling covariance structure in the analysis of repeated measures data}}, year = {2000}, month = {Jul}, @@ -167,7 +167,7 @@ @Book{Mallinckrodt2017 @Article{Mallinckrodt2008, author = {Craig H. Mallinckrodt and Peter W. Lane and Dan Schnell and Yahong Peng and James P. Mancuso}, - journal = {Drug Inf J}, + journal = {Drug Information Journal}, title = {{R}ecommendations for the {P}rimary {A}nalysis of {C}ontinuous {E}ndpoints in {L}ongitudinal {C}linical {T}rials}, year = {2008}, number = {4}, diff --git a/inst/WORDLIST b/inst/WORDLIST index ac3563ade..1496f2519 100644 --- a/inst/WORDLIST +++ b/inst/WORDLIST @@ -1,5 +1,6 @@ adh aic +al alessandro Alessandro Annalen @@ -65,6 +66,7 @@ Eigen eigen emmeans eprint +et expiratory fev FEV diff --git a/inst/jss.csl b/inst/jss.csl new file mode 100644 index 000000000..6329a62b7 --- /dev/null +++ b/inst/jss.csl @@ -0,0 +1,583 @@ + + diff --git a/vignettes/covariance.Rmd b/vignettes/covariance.Rmd index f03a821da..6c14ec903 100644 --- a/vignettes/covariance.Rmd +++ b/vignettes/covariance.Rmd @@ -2,6 +2,7 @@ title: "Covariance Structures in `mmrm`" package: mmrm bibliography: '`r system.file("REFERENCES.bib", package = "mmrm")`' +csl: '`r system.file("jss.csl", package = "mmrm")`' output: rmarkdown::html_document: theme: "spacelab" diff --git a/vignettes/kenward.Rmd b/vignettes/kenward.Rmd index 2f5aadcd8..011fcf678 100644 --- a/vignettes/kenward.Rmd +++ b/vignettes/kenward.Rmd @@ -2,6 +2,7 @@ title: "Details of the Kenward-Roger calculations" package: mmrm bibliography: '`r system.file("REFERENCES.bib", package = "mmrm")`' +csl: '`r system.file("jss.csl", package = "mmrm")`' output: rmarkdown::html_document: theme: "spacelab" diff --git a/vignettes/methodological_introduction.Rmd b/vignettes/methodological_introduction.Rmd index e83e6819a..014aff5db 100644 --- a/vignettes/methodological_introduction.Rmd +++ b/vignettes/methodological_introduction.Rmd @@ -2,6 +2,7 @@ title: "What are MMRMs? A brief introduction" package: mmrm bibliography: '`r system.file("REFERENCES.bib", package = "mmrm")`' +csl: '`r system.file("jss.csl", package = "mmrm")`' output: rmarkdown::html_document: theme: "spacelab" diff --git a/vignettes/satterthwaite.Rmd b/vignettes/satterthwaite.Rmd index 652fe5d74..88ee98be9 100644 --- a/vignettes/satterthwaite.Rmd +++ b/vignettes/satterthwaite.Rmd @@ -2,6 +2,7 @@ title: "Details of the Satterthwaite calculations" package: mmrm bibliography: '`r system.file("REFERENCES.bib", package = "mmrm")`' +csl: '`r system.file("jss.csl", package = "mmrm")`' output: rmarkdown::html_document: theme: "spacelab"