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    15 repositories

    • dl-toda

      Public
      Python
      •
      GNU General Public License v3.0
      •1•1•0•1•Updated Nov 14, 2024Nov 14, 2024

    • GEM-iPfu

      Public
      Jupyter Notebook
      •
      Other
      •0•1•0•0•Updated Nov 6, 2024Nov 6, 2024

    • GEM-iCbes

      Public
      Jupyter Notebook
      •
      Other
      •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • memonet

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2023Oct 7, 2023

    • psamm

      Public
      Curation and analysis of metabolic models
      bioinformaticsmetabolic-modelsmetabolic-networkpython
      Python
      •
      GNU General Public License v3.0
      •15•34•4•8•Updated Aug 8, 2023Aug 8, 2023

    • ReadsClassification

      Public
      Python
      •0•0•0•0•Updated Sep 18, 2022Sep 18, 2022

    • GEM-iWP2

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Aug 16, 2022Aug 16, 2022

    • psamm-tutorial

      Public
      Model files for the PSAMM tutorial
      4•0•0•0•Updated May 11, 2022May 11, 2022

    • psamm-model-collection

      Public
      Collection of PSAMM metabolic models converted from publicly available models
      8•7•0•1•Updated Oct 31, 2020Oct 31, 2020

    • test

      Public
      0•0•0•0•Updated Jun 15, 2020Jun 15, 2020

    • CMB320

      Public
      Python
      •
      GNU Lesser General Public License v3.0
      •0•0•0•0•Updated Mar 12, 2020Mar 12, 2020

    • psamm-import

      Public
      Import tool for PSAMM containing importers for SBML format and a number of published Excel formats
      Python
      •
      GNU General Public License v3.0
      •4•3•2•0•Updated Jun 30, 2017Jun 30, 2017

    • GEM-iWP3

      Public
      Metabolic model of the Shewanella piezotolerans WP3
      metabolic-models
      1•1•0•0•Updated Jun 23, 2017Jun 23, 2017

    • psamm-import-matlab

      Public
      PSAMM import module for MATLAB models
      Python
      •0•0•0•0•Updated Mar 7, 2017Mar 7, 2017

    • mothur

      Public
      Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
      C++
      •
      GNU General Public License v3.0
      •110•0•0•0•Updated Dec 5, 2014Dec 5, 2014