DESCRIPTION

Encoding: UTF-8
Package: bigsnpr
Type: Package
Title: Analysis of Massive SNP Arrays
Version: 1.12.16
Date: 2024-09-24
Authors@R: c(
    person("Florian", "Privé", email = "florian.prive.21@gmail.com", role = c("aut", "cre")),
    person("Michael", "Blum", role = "ths"),
    person("Hugues", "Aschard", email = "hugues.aschard@pasteur.fr", role = "ths"),
    person("Bjarni Jóhann", "Vilhjálmsson", email = "bjv@econ.au.dk", role = "ths"))
Description: Easy-to-use, efficient, flexible and scalable tools for analyzing 
    massive SNP arrays. Privé et al. (2018) <doi:10.1093/bioinformatics/bty185>.
License: GPL-3
LazyData: TRUE
Language: en-US
ByteCompile: TRUE
SystemRequirements: A few functions from package 'bigsnpr' wrap existing 
    software such as 'PLINK' <www.cog-genomics.org/plink2>. Functions are
    provided to download these software. Note that these external software might 
    not work for some operating systems (e.g. 'PLINK' might not work on Solaris).
Depends:
    R (>= 3.4), 
    bigstatsr (>= 1.5.11)
Imports:
    bigassertr (>= 0.1.6),
    bigparallelr,
    bigsparser (>= 0.6),
    bigreadr,
    bigutilsr (>= 0.3.3),
    data.table (>= 1.12.4),
    doRNG,
    foreach,
    ggplot2,
    magrittr,
    Matrix (>= 1.3.0),
    methods,
    Rcpp,
    runonce (>= 0.2.3),
    stats,
    vctrs
LinkingTo:
    bigsparser,
    bigstatsr,
    Rcpp,
    RcppArmadillo (>= 0.9.600),
    rmio,
    roptim (>= 0.1.6)
Suggests:
    bindata,
    covr,
    dbplyr (>= 1.4),
    dplyr,
    gaston,
    glue,
    Hmisc,
    microbenchmark,
    pcadapt (>= 4.1),
    quadprog,
    RhpcBLASctl,
    rmutil,
    RSpectra,
    RSQLite,
    R.utils,
    spelling, 
    testthat,
    tibble,
    xgboost
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
URL: https://privefl.github.io/bigsnpr/
BugReports: https://github.com/privefl/bigsnpr/issues