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fix: set TMPDIR env var before subprocess call. remove hardcoded cond…
Test Aviary with Setup-Miniconda From Marketplace #46: Commit 54623cd pushed by rhysnewell
August 8, 2023 22:54 2m 1s sanitise_subprocess_calls
August 8, 2023 22:54 2m 1s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #45: Pull request #107 synchronize by rhysnewell
August 8, 2023 06:03 2m 40s sanitise_subprocess_calls
August 8, 2023 06:03 2m 40s
fix #108 update concoct recipe to limit sklean version
Test Aviary with Setup-Miniconda From Marketplace #44: Commit 87baa7e pushed by rhysnewell
August 8, 2023 06:03 2m 40s sanitise_subprocess_calls
August 8, 2023 06:03 2m 40s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #43: Pull request #107 synchronize by rhysnewell
August 5, 2023 11:24 2m 23s sanitise_subprocess_calls
August 5, 2023 11:24 2m 23s
all relevant instances of shell=True converted
Test Aviary with Setup-Miniconda From Marketplace #42: Commit ee12734 pushed by rhysnewell
August 5, 2023 11:24 2m 19s sanitise_subprocess_calls
August 5, 2023 11:24 2m 19s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #41: Pull request #107 synchronize by rhysnewell
August 5, 2023 08:43 2m 44s sanitise_subprocess_calls
August 5, 2023 08:43 2m 44s
replace commands in polish.py, needs testing
Test Aviary with Setup-Miniconda From Marketplace #40: Commit 6d77ed4 pushed by rhysnewell
August 5, 2023 08:43 2m 43s sanitise_subprocess_calls
August 5, 2023 08:43 2m 43s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #39: Pull request #107 synchronize by rhysnewell
August 4, 2023 06:03 2m 44s sanitise_subprocess_calls
August 4, 2023 06:03 2m 44s
update complex piped subprocess commands, needs testing
Test Aviary with Setup-Miniconda From Marketplace #38: Commit 8a50ac0 pushed by rhysnewell
August 4, 2023 06:03 2m 24s sanitise_subprocess_calls
August 4, 2023 06:03 2m 24s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #37: Pull request #107 synchronize by rhysnewell
August 4, 2023 05:16 2m 40s sanitise_subprocess_calls
August 4, 2023 05:16 2m 40s
fix: initial subprocess command, removed quotes around config.yaml path
Test Aviary with Setup-Miniconda From Marketplace #36: Commit b63a6b4 pushed by rhysnewell
August 4, 2023 05:16 2m 49s sanitise_subprocess_calls
August 4, 2023 05:16 2m 49s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #35: Pull request #107 synchronize by rhysnewell
August 3, 2023 23:43 2m 27s sanitise_subprocess_calls
August 3, 2023 23:43 2m 27s
convert to run with no shell=True
Test Aviary with Setup-Miniconda From Marketplace #34: Commit d3bd50c pushed by rhysnewell
August 3, 2023 23:43 2m 24s sanitise_subprocess_calls
August 3, 2023 23:43 2m 24s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #33: Pull request #107 synchronize by rhysnewell
August 3, 2023 23:20 2m 26s sanitise_subprocess_calls
August 3, 2023 23:20 2m 26s
convert to run with no shell=True
Test Aviary with Setup-Miniconda From Marketplace #32: Commit 3a05d71 pushed by rhysnewell
August 3, 2023 23:20 2m 28s sanitise_subprocess_calls
August 3, 2023 23:20 2m 28s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #31: Pull request #107 synchronize by rhysnewell
August 3, 2023 23:11 2m 19s sanitise_subprocess_calls
August 3, 2023 23:11 2m 19s
put shell=True back into main process command to debug
Test Aviary with Setup-Miniconda From Marketplace #30: Commit 87e75c4 pushed by rhysnewell
August 3, 2023 23:11 2m 18s sanitise_subprocess_calls
August 3, 2023 23:11 2m 18s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #29: Pull request #107 synchronize by rhysnewell
August 3, 2023 23:05 2m 37s sanitise_subprocess_calls
August 3, 2023 23:05 2m 37s
put shell=True back into main process command to debug
Test Aviary with Setup-Miniconda From Marketplace #28: Commit e748b34 pushed by rhysnewell
August 3, 2023 23:05 1m 59s sanitise_subprocess_calls
August 3, 2023 23:05 1m 59s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #27: Pull request #107 opened by rhysnewell
August 3, 2023 11:42 2m 6s sanitise_subprocess_calls
August 3, 2023 11:42 2m 6s
fix: removal of instances of shell=True
Test Aviary with Setup-Miniconda From Marketplace #26: Commit 6b1abf7 pushed by rhysnewell
August 3, 2023 11:39 2m 24s sanitise_subprocess_calls
August 3, 2023 11:39 2m 24s
Merge pull request #105 from rhysnewell/fix-checkm-subprocess
Test Aviary with Setup-Miniconda From Marketplace #25: Commit aa90293 pushed by rhysnewell
August 1, 2023 23:00 2m 47s dev
dev
August 1, 2023 23:00 2m 47s
Fix checkm subprocess
Test Aviary with Setup-Miniconda From Marketplace #24: Pull request #105 synchronize by AroneyS
August 1, 2023 22:28 2m 45s fix-checkm-subprocess
August 1, 2023 22:28 2m 45s
revert shell=True and fix subprocess call
Test Aviary with Setup-Miniconda From Marketplace #23: Commit 0749aa4 pushed by AroneyS
August 1, 2023 22:28 2m 19s fix-checkm-subprocess
August 1, 2023 22:28 2m 19s
Fix checkm subprocess
Test Aviary with Setup-Miniconda From Marketplace #22: Pull request #105 synchronize by AroneyS
August 1, 2023 03:01 2m 34s fix-checkm-subprocess
August 1, 2023 03:01 2m 34s
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