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IPO

How long since the package was first in a released Bioconductor version (or is it in devel only). Percentile (top 5/20/50% or 'available') of downloads over last 6 full months. Comparison is done across all package categories (software, annotation, experiment). Project Status: Unsupported – The project has reached a stable, usable state but the author(s) have ceased all work on it. A new maintainer may be desired.

Latest release: Build Status Biocondcutor Release Devel: Build Status Biocondcutor Devel codecov @master: Build Status Travis-CI

IPO (‘Isotopologue Parameter Optimization’) is a tool for automated Optimization of XCMS Parameters. It is a fast and free of labeling steps, and applicable to data from different kinds of samples and data from different methods of liquid chromatography - high resolution mass spectrometry and data from different instruments.

Find out more about the usage in the package vignette (Biocondcutor development version). The publication is available from http://www.biomedcentral.com/1471-2105/16/118.

Installation

Get the latest release version from Bioconductor:

## try http:// if https:// URLs are not supported
if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("IPO")

Or the development version from Github:

# install.packages("devtools")
devtools::install_github("rietho/IPO")